Bhi01M000843 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTATTTTAACAATGAGTAGAAATTTTATTTCAAATGTTTTATTGAGTGAATAAAATGGGAAAACACTATACATACATATGAAATTGAAAAACAATAATAACGTTTTTCATAAACAAAAATTAAATAATAAATTGGTAATGTTTTGACTCACCTACCCCTTTAATTATTTTTTGCATCACAGATGTTTCCCAAAGTTTTCAAAAAGGTTTGGACAAACTTCACCATGAAAAGCAAATACTCAAAAGCAATTGGTTAGGTTTTTGTTTTTTTAAAAGAAATTTGGTCCCTTTAATCTCACTAATGCTTCTCCCACTAATGCATGTTTCTCTATTCTTTTTCCCTCCATCACAAAAATTGAAGGAAAAAAAATGAAAAAAGAAATTAGATTTTATGCAATAATATCTATAAAGTTTCTCCCCATTAGTAAAGAAAGAACTAAAAGAAATGAGGCAAAAATTGTCTATCAAAAGTCAGAACAACAACATGAGAAGAAGAATCTCAAGCAAGCCAATTTGTTTACAATCTTGCTTTCTTCTCCTCTTTCTCTTTCTCCTCCTACTTCAAGATCTTTGTCTCGTTCGAGCTTTGTCGAAGCATTCTTGCAATGGCTCCATAGCCGAGTGTGGTAGCGAGGAGGAGATGCTGATGGAATCGGAGATAAGTCGAAGGTTTCTCGAACAACATAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCATCCAGCTTGTGATGGCAGTGGTGGCGGTCAGCCTTACACCAAAAGCGGAAGCTGCGTGCCACCACCGACTAATCCTTACACTCGAGGCTGCTCAAAGATATATCGTTGTAGGTCTGATGATTGATGGCTTGAACAAACCATAGTATGCTTTGTAGAATCTCTTTTTTTTCTTGTTCTTGTTGTGTTCTTGTTGGTTGATGAAGGGATTTAATTATGAATTAATGAAGCTTGAAATGGGATTTTTCTTTTTCATTGTGATCTCATTTTTGTTTTTGGCAAATAAGAGAGATGAGAAGTGTTAGAAATGTTTGGTTGGACATCATGTTGGCCAGGATGTAAAGTGTGAAAACCAACCTCATACCTAATCTTATCTTTTGTCTTGCATAGGAACTTGTCGGGATTTGTTCATTCTTAATGTACTTTTCATTTTAAAGAAGTATTTTTTTATTAAAGAACGTACGTAATCTATCCATATTCATCTATATGATCAAGTTACTTGATTCATACAACGATGTTTTATTGTTTTTTATTTCCCCTTATTTTAAATGCCTCGATCTTTCGACTTACGTTCAGTCTATGTTGAGAAAATTTGTCATTTCAATAAAACTATAGGTAATAATCAATATAGAAGTTGTGCATAGAAAGAACTCAATGTAAGTCATGCAAGGTAAATTTGTTTCTTATTTAAATCTTAATGTACTTTTCTCTCTCTTAAAATAAAAGAAATTACATCGTTTTAATCCGAAAGTATGAACACTATAC TTTTATTTTAACAATGAGTAGAAATTTTATTTCAAATGTTTTATTGAGTGAATAAAATGGGAAAACACTATACATACATATGAAATTGAAAAACAATAATAACGTTTTTCATAAACAAAAATTAAATAATAAATTGGTAATGTTTTGACTCACCTACCCCTTTAATTATTTTTTGCATCACAGATGTTTCCCAAAGTTTTCAAAAAGGTTTGGACAAACTTCACCATGAAAAGCAAATACTCAAAAGCAATTGGTTAGGTTTTTGTTTTTTTAAAAGAAATTTGGTCCCTTTAATCTCACTAATGCTTCTCCCACTAATGCATGTTTCTCTATTCTTTTTCCCTCCATCACAAAAATTGAAGGAAAAAAAATGAAAAAAGAAATTAGATTTTATGCAATAATATCTATAAAGTTTCTCCCCATTAGTAAAGAAAGAACTAAAAGAAATGAGGCAAAAATTGTCTATCAAAAGTCAGAACAACAACATGAGAAGAAGAATCTCAAGCAAGCCAATTTGTTTACAATCTTGCTTTCTTCTCCTCTTTCTCTTTCTCCTCCTACTTCAAGATCTTTGTCTCGTTCGAGCTTTGTCGAAGCATTCTTGCAATGGCTCCATAGCCGAGTGTGGTAGCGAGGAGGAGATGCTGATGGAATCGGAGATAAGTCGAAGGTTTCTCGAACAACATAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCATCCAGCTTGTGATGGCAGTGGTGGCGGTCAGCCTTACACCAAAAGCGGAAGCTGCGTGCCACCACCGACTAATCCTTACACTCGAGGCTGCTCAAAGATATATCGTTGTAGGTCTGATGATTGATGGCTTGAACAAACCATAGTATGCTTTGTAGAATCTCTTTTTTTTCTTGTTCTTGTTGTGTTCTTGTTGGTTGATGAAGGGATTTAATTATGAATTAATGAAGCTTGAAATGGGATTTTTCTTTTTCATTGTGATCTCATTTTTGTTTTTGGCAAATAAGAGAGATGAGAAGTGTTAGAAATGTTTGGTTGGACATCATGTTGGCCAGGATGTAAAGTGTGAAAACCAACCTCATACCTAATCTTATCTTTTGTCTTGCATAGGAACTTGTCGGGATTTGTTCATTCTTAATGTACTTTTCATTTTAAAGAAGTATTTTTTTATTAAAGAACGTACGTAATCTATCCATATTCATCTATATGATCAAGTTACTTGATTCATACAACGATGTTTTATTGTTTTTTATTTCCCCTTATTTTAAATGCCTCGATCTTTCGACTTACGTTCAGTCTATGTTGAGAAAATTTGTCATTTCAATAAAACTATAGGTAATAATCAATATAGAAGTTGTGCATAGAAAGAACTCAATGTAAGTCATGCAAGGTAAATTTGTTTCTTATTTAAATCTTAATGTACTTTTCTCTCTCTTAAAATAAAAGAAATTACATCGTTTTAATCCGAAAGTATGAACACTATAC ATGAGGCAAAAATTGTCTATCAAAAGTCAGAACAACAACATGAGAAGAAGAATCTCAAGCAAGCCAATTTGTTTACAATCTTGCTTTCTTCTCCTCTTTCTCTTTCTCCTCCTACTTCAAGATCTTTGTCTCGTTCGAGCTTTGTCGAAGCATTCTTGCAATGGCTCCATAGCCGAGTGTGGTAGCGAGGAGGAGATGCTGATGGAATCGGAGATAAGTCGAAGGTTTCTCGAACAACATAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCATCCAGCTTGTGATGGCAGTGGTGGCGGTCAGCCTTACACCAAAAGCGGAAGCTGCGTGCCACCACCGACTAATCCTTACACTCGAGGCTGCTCAAAGATATATCGTTGTAGGTCTGATGATTGA MRQKLSIKSQNNNMRRRISSKPICLQSCFLLLFLFLLLLQDLCLVRALSKHSCNGSIAECGSEEEMLMESEISRRFLEQHKKYISIGALKKDHPACDGSGGGQPYTKSGSCVPPPTNPYTRGCSKIYRCRSDD
BLAST of Bhi01M000843 vs. TAIR10
Match: AT4G14010.1 (ralf-like 32) HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18 Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Bhi01M000843 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22) HSP 1 Score: 67.4 bits (163), Expect = 7.6e-12 Identity = 39/79 (49.37%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of Bhi01M000843 vs. TAIR10
Match: AT1G02900.1 (rapid alkalinization factor 1) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of Bhi01M000843 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33) HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10 Identity = 46/119 (38.66%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of Bhi01M000843 vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23) HSP 1 Score: 53.9 bits (128), Expect = 8.7e-08 Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of Bhi01M000843 vs. Swiss-Prot
Match: sp|O23262|RLF32_ARATH (Protein RALF-like 32 OS=Arabidopsis thaliana OX=3702 GN=RALFL32 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.4e-17 Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Bhi01M000843 vs. Swiss-Prot
Match: sp|Q9MA62|RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10 Identity = 39/79 (49.37%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of Bhi01M000843 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.0e-10 Identity = 41/86 (47.67%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of Bhi01M000843 vs. Swiss-Prot
Match: sp|Q9SRY3|RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.0e-10 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of Bhi01M000843 vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-09 Identity = 46/119 (38.66%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of Bhi01M000843 vs. TrEMBL
Match: tr|A0A0A0L9A8|A0A0A0L9A8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171840 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 3.0e-47 Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0
BLAST of Bhi01M000843 vs. TrEMBL
Match: tr|A0A0A0L624|A0A0A0L624_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171850 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28 Identity = 72/99 (72.73%), Postives = 76/99 (76.77%), Query Frame = 0
BLAST of Bhi01M000843 vs. TrEMBL
Match: tr|A0A1S3TB48|A0A1S3TB48_VIGRR (protein RALF-like 32 OS=Vigna radiata var. radiata OX=3916 GN=LOC106753652 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.4e-28 Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Bhi01M000843 vs. TrEMBL
Match: tr|A0A0S3R1D3|A0A0S3R1D3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G214200 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.2e-28 Identity = 67/118 (56.78%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Bhi01M000843 vs. TrEMBL
Match: tr|C6T1A5|C6T1A5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500295 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.2e-28 Identity = 63/107 (58.88%), Postives = 77/107 (71.96%), Query Frame = 0
BLAST of Bhi01M000843 vs. NCBI nr
Match: XP_004147646.2 (PREDICTED: protein RALF-like 32 [Cucumis sativus] >KGN57227.1 hypothetical protein Csa_3G171840 [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47 Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0
BLAST of Bhi01M000843 vs. NCBI nr
Match: XP_023528073.1 (protein RALF-like 32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46 Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of Bhi01M000843 vs. NCBI nr
Match: XP_022956250.1 (protein RALF-like 32 [Cucurbita moschata]) HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45 Identity = 93/108 (86.11%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of Bhi01M000843 vs. NCBI nr
Match: XP_022138047.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42 Identity = 95/120 (79.17%), Postives = 100/120 (83.33%), Query Frame = 0
BLAST of Bhi01M000843 vs. NCBI nr
Match: KGN57228.1 (hypothetical protein Csa_3G171850 [Cucumis sativus]) HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28 Identity = 72/99 (72.73%), Postives = 76/99 (76.77%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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