MELO3C035733.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035733.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionAnkyrin repeat-containing protein
Locationchr12 : 24183170 .. 24184455 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTACTGCAAAGTAAGATATAGATTAGGGTGCAATCATATCAGTACTAATGCATTGGATATCCCATAACTCCACAATTATGCATGGATGAGAGTAATATTAAATTAGGTGACTATTTGAAAAATACGAACCACTCCTTTGAAGATATATATTAATTTAAAAGTGAAACAATCACATGGGGCTTTTTCTCTTTAGCCCACTATGAAAAGTGGAGCTACAGTCCCATGGTCCCATCTATCTAGTCAATATCAGCTCAATTTTGTTTTAATTACTTCAGAGTGAGAAAAGTAGAAGTCGAAGGGAGATCAAGATAAAGAAACGTATGAGAAAATCAAAGAGTTTGCCTTCAATTATTCCAAATTATAATTCATTGTTTGAGGAAAGTGAAGATGAGCTTACTTTACATACTGCTTGGAACCGACTTGCTGCCATGTTTAACGACACTCATTTGGAGACGCAGGCCATAGACACTGATCAACCCTCAGATCATAAATTACTCCAAATTGGTGGTAAAAATTATTTCAAGTACTCCTTTTTTATCTACTTCTCACTTCTTTATCTTTTCTAATTCTTACATTAAAAAGCGTTCTCTGTTCATCATCAAAATAAAAAAGTAGTCCAGCTTTTAAGCTTTTTTTTCTTTTTAATGATTATATTATGTTGTTCATTTTTTTATTTAATCTTATTTAAGAAATATTATTTCTTTTTCGATTTGGTGCACTTGTTGGGTTAAAATAATTGTTGCAAAAATGTCATGGCGCGGTCTCCATATCACTCAAGAACGTTGCCACCCCCTATATCAAATGGAGACTAAACGTCACATGATATTTGGACGAAACACCTGAAAAATGATGACAAAAAAAAAATTAACCAGTGGTAATAGTGCTAGAGGTCGCATAACTAGGTGAGCAAACGCACAAAGACATCACAACTAAGTTAACAAATCGGACATTCAACCATTATTTATAACTTAATTTTCCTAAATCAAAAACTAAAATAATCCCAATGTTCATCAAATGGAGGCTAAACTCATTGAATGAGGAGAGAATTAATGAGTTTATAATAACAATATATGCATTTATGGGTGTGTGTACATAATTATTGCATATGATATGATAATTTCAGCTGCTAACACAAGGATATTTCTGTATCAAAATGCACTCAAGGGTGAATGGGAATATGTGGAATTACTACTTGACGAGAGCCCACATATTGTTCGTAGTGCAATAACAAGAAACAAAGAGATTATTCTTCACATTGCAGCAGGGAGCCCAACAAATTGA

mRNA sequence

ATGGAGTACTGCAAAAGTGAGAAAAGTAGAAGTCGAAGGGAGATCAAGATAAAGAAACGTATGAGAAAATCAAAGAGTTTGCCTTCAATTATTCCAAATTATAATTCATTGTTTGAGGAAAGTGAAGATGAGCTTACTTTACATACTGCTTGGAACCGACTTGCTGCCATGTTTAACGACACTCATTTGGAGACGCAGGCCATAGACACTGATCAACCCTCAGATCATAAATTACTCCAAATTGGTGCTGCTAACACAAGGATATTTCTGTATCAAAATGCACTCAAGGGTGAATGGGAATATGTGGAATTACTACTTGACGAGAGCCCACATATTGTTCGTAGTGCAATAACAAGAAACAAAGAGATTATTCTTCACATTGCAGCAGGGAGCCCAACAAATTGA

Coding sequence (CDS)

ATGGAGTACTGCAAAAGTGAGAAAAGTAGAAGTCGAAGGGAGATCAAGATAAAGAAACGTATGAGAAAATCAAAGAGTTTGCCTTCAATTATTCCAAATTATAATTCATTGTTTGAGGAAAGTGAAGATGAGCTTACTTTACATACTGCTTGGAACCGACTTGCTGCCATGTTTAACGACACTCATTTGGAGACGCAGGCCATAGACACTGATCAACCCTCAGATCATAAATTACTCCAAATTGGTGCTGCTAACACAAGGATATTTCTGTATCAAAATGCACTCAAGGGTGAATGGGAATATGTGGAATTACTACTTGACGAGAGCCCACATATTGTTCGTAGTGCAATAACAAGAAACAAAGAGATTATTCTTCACATTGCAGCAGGGAGCCCAACAAATTGA

Protein sequence

MEYCKSEKSRSRREIKIKKRMRKSKSLPSIIPNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGSPTN
Homology
[Close]
BLAST of MELO3C035733.2 vs. NCBI nr
Match: XP_011652468.1 (PREDICTED: uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus] >KGN64473.1 hypothetical protein Csa_1G058080 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 4.2e-40
Identity = 94/121 (77.69%), Postives = 103/121 (85.12%), Query Frame = 0 

Query: 15  IKIKKRMRKSKSLPSIIPNYNSLFEESEDEL--TLHTAWNRLAA-MFND-THLETQAIDT 74
           +K+KKRMRKS S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  HLET A D 
Sbjct: 1   MKMKKRMRKSTSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDA 60

Query: 75  DQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAG 132
           D+PSDH L QIGAA TRIFLYQNALKGEWEYVELLLDESP+IVRSAITRN+E ILHIAAG
Sbjct: 61  DEPSDHNLFQIGAA-TRIFLYQNALKGEWEYVELLLDESPNIVRSAITRNRETILHIAAG 120

[Close]
BLAST of MELO3C035733.2 vs. NCBI nr
Match: XP_011652476.1 (PREDICTED: uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 4.2e-40
Identity = 94/121 (77.69%), Postives = 103/121 (85.12%), Query Frame = 0 

Query: 15  IKIKKRMRKSKSLPSIIPNYNSLFEESEDEL--TLHTAWNRLAA-MFND-THLETQAIDT 74
           +K+KKRMRKS S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  HLET A D 
Sbjct: 1   MKMKKRMRKSTSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDA 60

Query: 75  DQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAG 132
           D+PSDH L QIGAA TRIFLYQNALKGEWEYVELLLDESP+IVRSAITRN+E ILHIAAG
Sbjct: 61  DEPSDHNLFQIGAA-TRIFLYQNALKGEWEYVELLLDESPNIVRSAITRNRETILHIAAG 120

[Close]
BLAST of MELO3C035733.2 vs. NCBI nr
Match: XP_004145199.1 (PREDICTED: uncharacterized protein LOC101215460 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 4.2e-08
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y     ESE     H + N      + T +    +D+D    ++       + R+ LY
Sbjct: 18  PSYTVDDAESEPTSAAHLS-NCTTQEISRTIVSDYELDSDPMEKNR----AETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 132
           ++ALKG+W+  EL+L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAELVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.2 vs. NCBI nr
Match: KGN64475.1 (hypothetical protein Csa_1G058100 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 4.2e-08
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y     ESE     H + N      + T +    +D+D    ++       + R+ LY
Sbjct: 18  PSYTVDDAESEPTSAAHLS-NCTTQEISRTIVSDYELDSDPMEKNR----AETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 132
           ++ALKG+W+  EL+L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAELVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.2 vs. NCBI nr
Match: XP_008440631.1 (PREDICTED: uncharacterized protein LOC103484989 isoform X1 [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y +   +SE     H + N      + T      +D+D    +++      + R+ LY
Sbjct: 18  PSYTADDAKSEPTSAAHLS-NCTTPEISRTIASDYELDSDTMEKNRV----ETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 132
           ++ALKG+W+  E +L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAEFVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.2 vs. TrEMBL
Match: tr|A0A0A0LRT6|A0A0A0LRT6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058080 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.8e-40
Identity = 94/121 (77.69%), Postives = 103/121 (85.12%), Query Frame = 0 

Query: 15  IKIKKRMRKSKSLPSIIPNYNSLFEESEDEL--TLHTAWNRLAA-MFND-THLETQAIDT 74
           +K+KKRMRKS S PSIIPNYNSLFEE+ED+     HTAWNRLAA MF +  HLET A D 
Sbjct: 1   MKMKKRMRKSTSFPSIIPNYNSLFEENEDDQDERSHTAWNRLAATMFKEYAHLETHAKDA 60

Query: 75  DQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAG 132
           D+PSDH L QIGAA TRIFLYQNALKGEWEYVELLLDESP+IVRSAITRN+E ILHIAAG
Sbjct: 61  DEPSDHNLFQIGAA-TRIFLYQNALKGEWEYVELLLDESPNIVRSAITRNRETILHIAAG 120

[Close]
BLAST of MELO3C035733.2 vs. TrEMBL
Match: tr|A0A0A0LRD1|A0A0A0LRD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058100 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.8e-08
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y     ESE     H + N      + T +    +D+D    ++       + R+ LY
Sbjct: 18  PSYTVDDAESEPTSAAHLS-NCTTQEISRTIVSDYELDSDPMEKNR----AETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 132
           ++ALKG+W+  EL+L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAELVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.2 vs. TrEMBL
Match: tr|A0A1S3B146|A0A1S3B146_CUCME (uncharacterized protein LOC103484989 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484989 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 32  PNYNSLFEESEDELTLHTAWNRLAAMFNDTHLETQAIDTDQPSDHKLLQIGAANTRIFLY 91
           P+Y +   +SE     H + N      + T      +D+D    +++      + R+ LY
Sbjct: 18  PSYTADDAKSEPTSAAHLS-NCTTPEISRTIASDYELDSDTMEKNRV----ETSRRLLLY 77

Query: 92  QNALKGEWEYVELLLDESPHIVRSAITRNKEIILHIAAGS 132
           ++ALKG+W+  E +L++ PH VR AITRNKE +LH+AAG+
Sbjct: 78  KSALKGDWKRAEFVLNDYPHYVRCAITRNKETVLHVAAGA 112

[Close]
BLAST of MELO3C035733.2 vs. TrEMBL
Match: tr|A0A1S4DY91|A0A1S4DY91_CUCME (uncharacterized protein LOC103484975 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484975 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06
Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = 0 

Query: 54  LAAMFNDTHL--ETQAIDTDQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPH 113
           +AA+  +  L   + A ++D PS  +         + FLY++ALKGEW  VE L+++ PH
Sbjct: 128 IAAVLENQQLRNSSNAKNSDAPSPRE---------KTFLYRSALKGEWRRVESLIEKYPH 187

Query: 114 IVRSAITRNKEIILHIAAGS 132
             R A+T+N+E +LH+AAG+
Sbjct: 188 YARCAVTKNQETVLHVAAGA 198

[Close]
BLAST of MELO3C035733.2 vs. TrEMBL
Match: tr|A0A1S3B243|A0A1S3B243_CUCME (uncharacterized protein LOC103484975 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484975 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06
Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = 0 

Query: 54  LAAMFNDTHL--ETQAIDTDQPSDHKLLQIGAANTRIFLYQNALKGEWEYVELLLDESPH 113
           +AA+  +  L   + A ++D PS  +         + FLY++ALKGEW  VE L+++ PH
Sbjct: 128 IAAVLENQQLRNSSNAKNSDAPSPRE---------KTFLYRSALKGEWRRVESLIEKYPH 187

Query: 114 IVRSAITRNKEIILHIAAGS 132
             R A+T+N+E +LH+AAG+
Sbjct: 188 YARCAVTKNQETVLHVAAGA 198

The following BLAST results are available for this feature:
BLAST of MELO3C035733.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652468.14.2e-4077.69PREDICTED: uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus] >KG... [more]
XP_011652476.14.2e-4077.69PREDICTED: uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus][more]
XP_004145199.14.2e-0837.00PREDICTED: uncharacterized protein LOC101215460 [Cucumis sativus][more]
KGN64475.14.2e-0837.00hypothetical protein Csa_1G058100 [Cucumis sativus][more]
XP_008440631.12.1e-0735.00PREDICTED: uncharacterized protein LOC103484989 isoform X1 [Cucumis melo][more]
BLAST of MELO3C035733.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035733.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035733.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRT6|A0A0A0LRT6_CUCSA2.8e-4077.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058080 PE=4 SV=1[more]
tr|A0A0A0LRD1|A0A0A0LRD1_CUCSA2.8e-0837.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058100 PE=4 SV=1[more]
tr|A0A1S3B146|A0A1S3B146_CUCME1.4e-0735.00uncharacterized protein LOC103484989 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DY91|A0A1S4DY91_CUCME1.5e-0638.75uncharacterized protein LOC103484975 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3B243|A0A1S3B243_CUCME1.5e-0638.75uncharacterized protein LOC103484975 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035733.2.1MELO3C035733.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C035733.2CsGy1G010190Cucumber (Gy14) v2cgybmedB020
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035733.2Cucumber (Gy14) v1cgymedB216
MELO3C035733.2Cucurbita maxima (Rimu)cmamedB218
MELO3C035733.2Cucurbita maxima (Rimu)cmamedB413
MELO3C035733.2Cucurbita moschata (Rifu)cmomedB206
MELO3C035733.2Cucurbita moschata (Rifu)cmomedB408
MELO3C035733.2Cucurbita pepo (Zucchini)cpemedB031
MELO3C035733.2Cucurbita pepo (Zucchini)cpemedB552
MELO3C035733.2Cucumber (Chinese Long) v2cumedB022
MELO3C035733.2Wild cucumber (PI 183967)cpimedB023
MELO3C035733.2Bottle gourd (USVL1VR-Ls)lsimedB189
MELO3C035733.2Watermelon (Charleston Gray)medwcgB143
MELO3C035733.2Watermelon (Charleston Gray)medwcgB144
MELO3C035733.2Watermelon (97103) v1medwmB145
MELO3C035733.2Silver-seed gourdcarmedB0504
MELO3C035733.2Silver-seed gourdcarmedB0988
MELO3C035733.2Cucumber (Chinese Long) v3cucmedB022
MELO3C035733.2Watermelon (97103) v2medwmbB145
MELO3C035733.2Wax gourdmedwgoB162
MELO3C035733.2Wax gourdmedwgoB173