MELO3C035659.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035659.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionC2 domain-containing family protein
Locationchr12 : 16622345 .. 16623719 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTTGTCGCTTAGTTTCTAACACGTGGATGATGATTTTCATCGATTTGATTTAATTTGCTTCTCTATCTCTCTTTAATTTACAGCCCAGTACTCCACTTGAGCACTATGAATGGTTAAATAAGCCATTGATGGAGATTTGGCCTAACTTCATCAACCCAAAACTTTCATTAAAGTTCTCTACTATTGCTGAGGTGAATCTATTTTTCTTCTTCTGCAATGTCTGACTTTTTTTTCAGCAATTTTTTTTTTAGGTGGACTTGGCTGTAACTGAACTCAATATACTCAATATTAACCTTACAATCTTTGCCTAAAGTTGTTTCAATGGTTATTTATCGTGTTGCTATTTTAATTAGTTTCACTATTAGATGCTTATTTTGTCTTCATAGACAAATGCAGGAAGGTCGATAAAATATATAGCTTTTTGGATTTCTAATTTGAGAAAATGTGAAAAATCAAATAAATAGAGAAAAGAGTGGAACTGACTGATCAACATTCAATATGATTCTACATGAAGATACAGGAACTCTTTGGTTCAATTTTTATGAGTTAAATCCAAGCAATGTGAAGTATGACTATCTAGCCAGTTGTGAAATAAAGGTACTCTCCTTGTACCTTAGTTGTGCTACCTAGGTTGTCAGAAGAAATTTTGCAGTGAACACTTCAATATTTTGCAGCTAACAGTGAAGCTTATTGTTAAAAGAGTTGCAATTTTCTAATGGCTCACATAGCTTTTTTTGTTACACATGTACCAAAGTAATTGTGTAACCTTTATTCTAAGTTCAATTCACACTTCTGAAATAATATAGAAACTATTGGTCTATTTGCGATCGACTACACGAAGGGTAGTGGTGCATAGAAGAAATAGGTAAGCGTGGTTTATTTTCCCAATCGTAAACATAAACTATTTCCTTCTTTTTTTTCTTTCTGGTGCATAGTGTCCAAAGCAGCTATAAAATTATCAACCGTAGTGTCTATGAGTTCTACCGTATTTCTTCATGTGATAAATAGTTTTTGTATTAAAGAGGTACATGTTTCACTTATATTTGCAACAGTTATAGCATTTTACCCTATGTAGTCCATGTTTTTATTTCATTATTCTCTCTTCTTTGTCTTCTTCTAGGTATTGATACCGGTCTTTATTGAATTTGTTAGCCATAATGGAAACATAATAGTTTCCTTGTGTTTAAGTTTATTTTGATGTGGAGTCTGTCTACGTAATTATGTTTTGAATTACTTAATGAATTTTAATTAAGGTTCATCTTTGGCAAATTTGCAGGTATTTGAAGAATCTGTGGACCATGAGATCAATTATCAAGTCCATTTATACTTTAATTTGATTAGATTAGGTCACTCATACATGTATTACAGTTAA

mRNA sequence

GTTTTTGTCGCTTAGTTTCTAACACGTGGATGATGATTTTCATCGATTTGATTTAATTTGCTTCTCTATCTCTCTTTAATTTACAGCCCAGTACTCCACTTGAGCACTATGAATGGTTAAATAAGCCATTGATGGAGATTTGGCCTAACTTCATCAACCCAAAACTTTCATTAAAGTTCTCTACTATTGCTGAGGTGAATCTATTTTTCTTCTTCTGCAATGTCTGACTTTTTTTTCAGCAATTTTTTTTTTAGGTGGACTTGGCTGTAACTGAACTCAATATACTCAATATTAACCTTACAATCTTTGCCTAAAGTTGTTTCAATGGTTATTTATCGTGTTGCTATTTTAATTAGTTTCACTATTAGATGCTTATTTTGTCTTCATAGACAAATGCAGGAAGGTCGATAAAATATATAGCTTTTTGGATTTCTAATTTGAGAAAATGTGAAAAATCAAATAAATAGAGAAAAGAGTGGAACTGACTGATCAACATTCAATATGATTCTACATGAAGATACAGGAACTCTTTGGTTCAATTTTTATGAGTTAAATCCAAGCAATGTGAAGTATGACTATCTAGCCAGTTGTGAAATAAAGGTATTTGAAGAATCTGTGGACCATGAGATCAATTATCAAGTCCATTTATACTTTAATTTGATTAGATTAGGTCACTCATACATGTATTACAGTTAA

Coding sequence (CDS)

ATGATTCTACATGAAGATACAGGAACTCTTTGGTTCAATTTTTATGAGTTAAATCCAAGCAATGTGAAGTATGACTATCTAGCCAGTTGTGAAATAAAGGTATTTGAAGAATCTGTGGACCATGAGATCAATTATCAAGTCCATTTATACTTTAATTTGATTAGATTAGGTCACTCATACATGTATTACAGTTAA

Protein sequence

MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKVFEESVDHEINYQVHLYFNLIRLGHSYMYYS
Homology
[Close]
BLAST of MELO3C035659.2 vs. NCBI nr
Match: XP_004138346.1 (PREDICTED: uncharacterized protein LOC101204113 [Cucumis sativus] >KGN63824.1 hypothetical protein Csa_1G023610 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 4.5e-08
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPSNVKYDYLASCE+K+
Sbjct: 371 MILHEDTGTLRFNLYESNPSNVKYDYLASCEVKM 404

[Close]
BLAST of MELO3C035659.2 vs. NCBI nr
Match: XP_008453397.1 (PREDICTED: synaptotagmin-5 isoform X1 [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 4.5e-08
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPSNVKYDYLASCE+K+
Sbjct: 361 MILHEDTGTLRFNLYESNPSNVKYDYLASCEVKM 394

[Close]
BLAST of MELO3C035659.2 vs. NCBI nr
Match: XP_008453398.1 (PREDICTED: uncharacterized protein LOC103494128 isoform X2 [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 4.5e-08
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPSNVKYDYLASCE+K+
Sbjct: 197 MILHEDTGTLRFNLYESNPSNVKYDYLASCEVKM 230

[Close]
BLAST of MELO3C035659.2 vs. NCBI nr
Match: XP_023531063.1 (synaptotagmin-5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPS+VKYDYLASCE+K+
Sbjct: 359 MILHEDTGTLRFNLYESNPSHVKYDYLASCEVKM 392

[Close]
BLAST of MELO3C035659.2 vs. NCBI nr
Match: XP_023531067.1 (synaptotagmin-5-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPS+VKYDYLASCE+K+
Sbjct: 356 MILHEDTGTLRFNLYESNPSHVKYDYLASCEVKM 389

[Close]
BLAST of MELO3C035659.2 vs. TAIR10
Match: AT3G18370.1 (C2 domain-containing protein)

HSP 1 Score: 54.7 bits (130), Expect = 2.5e-08
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILH++TGTL FN YE NP +V+YD LASCE+K+
Sbjct: 362 MILHDNTGTLKFNLYENNPGSVRYDSLASCEVKM 395

[Close]
BLAST of MELO3C035659.2 vs. TrEMBL
Match: tr|A0A1S3BVL0|A0A1S3BVL0_CUCME (uncharacterized protein LOC103494128 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494128 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-08
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPSNVKYDYLASCE+K+
Sbjct: 197 MILHEDTGTLRFNLYESNPSNVKYDYLASCEVKM 230

[Close]
BLAST of MELO3C035659.2 vs. TrEMBL
Match: tr|A0A1S3BXB4|A0A1S3BXB4_CUCME (synaptotagmin-5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494128 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-08
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPSNVKYDYLASCE+K+
Sbjct: 361 MILHEDTGTLRFNLYESNPSNVKYDYLASCEVKM 394

[Close]
BLAST of MELO3C035659.2 vs. TrEMBL
Match: tr|A0A0A0LS29|A0A0A0LS29_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023610 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-08
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL FN YE NPSNVKYDYLASCE+K+
Sbjct: 371 MILHEDTGTLRFNLYESNPSNVKYDYLASCEVKM 404

[Close]
BLAST of MELO3C035659.2 vs. TrEMBL
Match: tr|A0A2P6P3P6|A0A2P6P3P6_ROSCH (Putative C2 domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0185511 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-07
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           M+LHE+TGTL FN YE  P+NVKYDYLASCE+KV
Sbjct: 360 MVLHEETGTLRFNLYESTPNNVKYDYLASCEVKV 393

[Close]
BLAST of MELO3C035659.2 vs. TrEMBL
Match: tr|A5BQ85|A5BQ85_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_035295 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-07
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 1   MILHEDTGTLWFNFYELNPSNVKYDYLASCEIKV 35
           MILHEDTGTL F  YE  PSNVKYDYLASCEIK+
Sbjct: 327 MILHEDTGTLRFQLYESTPSNVKYDYLASCEIKM 360

The following BLAST results are available for this feature:
BLAST of MELO3C035659.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138346.14.5e-0885.29PREDICTED: uncharacterized protein LOC101204113 [Cucumis sativus] >KGN63824.1 hy... [more]
XP_008453397.14.5e-0885.29PREDICTED: synaptotagmin-5 isoform X1 [Cucumis melo][more]
XP_008453398.14.5e-0885.29PREDICTED: uncharacterized protein LOC103494128 isoform X2 [Cucumis melo][more]
XP_023531063.11.7e-0782.35synaptotagmin-5-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023531067.11.7e-0782.35synaptotagmin-5-like isoform X4 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C035659.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18370.12.5e-0867.65C2 domain-containing protein[more]
BLAST of MELO3C035659.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035659.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BVL0|A0A1S3BVL0_CUCME3.0e-0885.29uncharacterized protein LOC103494128 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3BXB4|A0A1S3BXB4_CUCME3.0e-0885.29synaptotagmin-5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494128 PE=4 SV=1[more]
tr|A0A0A0LS29|A0A0A0LS29_CUCSA3.0e-0885.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023610 PE=4 SV=1[more]
tr|A0A2P6P3P6|A0A2P6P3P6_ROSCH5.6e-0776.47Putative C2 domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr... [more]
tr|A5BQ85|A5BQ85_VITVI5.6e-0782.35Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_035295 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035659.2.1MELO3C035659.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035659.2Cucumber (Gy14) v2cgybmedB011
MELO3C035659.2Cucumber (Gy14) v1cgymedB032
MELO3C035659.2Cucurbita maxima (Rimu)cmamedB213
MELO3C035659.2Cucurbita maxima (Rimu)cmamedB423
MELO3C035659.2Watermelon (97103) v1medwmB160
MELO3C035659.2Cucurbita moschata (Rifu)cmomedB201
MELO3C035659.2Cucurbita moschata (Rifu)cmomedB409
MELO3C035659.2Cucurbita pepo (Zucchini)cpemedB032
MELO3C035659.2Cucurbita pepo (Zucchini)cpemedB562
MELO3C035659.2Wild cucumber (PI 183967)cpimedB013
MELO3C035659.2Wild cucumber (PI 183967)cpimedB022
MELO3C035659.2Cucumber (Chinese Long) v2cumedB012
MELO3C035659.2Bottle gourd (USVL1VR-Ls)lsimedB190
MELO3C035659.2Watermelon (Charleston Gray)medwcgB132
MELO3C035659.2Watermelon (97103) v1medwmB151
MELO3C035659.2Silver-seed gourdcarmedB0122
MELO3C035659.2Cucumber (Chinese Long) v3cucmedB011
MELO3C035659.2Watermelon (97103) v2medwmbB131
MELO3C035659.2Wax gourdmedwgoB167