MELO3C035264.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035264.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description50S ribosomal protein L2, chloroplastic
Locationchr12 : 902782 .. 903937 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTCCTTAGACTGATAATGTTGAATCAGGATCAACTAGGACTTCTATCAATTCAATGGATGAACAAGTCAAGAGGATGGGTCGAACTCTTCTTTGGTGTCAAGATAATAGCTATGAATAGTCATTGACTTCCGAAAAAGGGTAGAAGAATGAGACCTATTATGGAACATACAATGCATTACAGACGTGAATATGGAATGTCATGACTTATAACGAAGTGGTCCGGAGGACTATTCGACCTATTCCTTTTAGAAAGAAAAGAACTGAAATCAAAATACTGAGTAGCATGACGATATATTTATACAAAACTTCTAGCTTGAGCTCGAGTTGCAATGGAGCCGTAGACAATCCACGAAAGAATTGGATATATGGACAACATCATTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACTGCAGTGCATAGAGGGGGAGGTTATAAGCGTCTATACTGTCCAATCTCTTTTGGAAGGAAAAAGACATATATGGTAGAATCATAACCATAGAATACGACCCTAATCGAAATGAATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGAGATATTTGACATCCCCAGAGGGGCTATAATTGGTGATACCATTCTTTCTGGTATAGAAGTTCCTATCAAAATGGGAAATACCCTACTGGTCTAAACTATTGATTTACATAATTGGAAGTAACCAATTAGGTTGACGATAAAACCTAGAAATCGATCATTAACCCAATTTGAGTACCTCTACAAGATAGACCTCAACAGAAAACTGAAGAGCAACGGTGGCAGCAAGTGTTTGAGTTTGATAGTTCCTCACATTAAATTATTGACTTTAGAGATATATTAATATGGAGAAGACTAAATTGTTTCAAGCACCAACAGAGCCAAAAGTGTCCCTTGTTTCAAAGAGAGGAGGACTTTCATTGACATTTTATGGTTAGAGGAAAATTGAAAGCTAAGTAGTGGTAATTCTAAGGATTCCTGAAGGAAAAAAGAGAGATGTCTCCTACATTGCTCGTAATATGTGGAAGTATCGACGTCATTTCATAGAGTCATTCGGTCTGAATGCTACATGAGAACATAAGCCAGATGAAGGAATGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTTGATAGATTTGGA

mRNA sequence

ATATTCCTTAGACTGATAATGTTGAATCAGGATCAACTAGGACTTAAGTCAAGAGGATGGGTCGAACTCTTCTTTGGTGTCAAGATAATAGCTATGAATAGTCATTGACTTCCGAAAAAGGGTAGAAGAATGAGACCTATTATGGAACATACAATGCATTACAGACGTGAATATGGAATGTCATGACTTATAACGAAGTGGTCTGAAATCAAAATACTGAGTAGCATGACGATATATTTATACAAAACTTCTAGCTTGAGCTCGAGTTGCAATGGAGCCGTAGACAATCCACGAAAGAATTGGATATATGGACAACATCATTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACTGCAGTGCATAGAGGGGGAGGTTATAAGCGTCTATACTGTCCAATCTCTTTTGGAAGGAAAAAGACATATATGGTAGAATCATAACCATAGAATACGACCCTAATCGAAATGAATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGAGATATTTGACATCCCCAGAGGGGCTATAATTGGTGATACCATTCTTTCTGGTATAGAAGTTCCTATCAAAATGGGAAATACCCTACTGGTCTAAACTATTGATTTACATAATTGGAAGTAACCAATTAGGTTGACGATAAAACCTAGAAATCGATCATTAACCCAATTTGAGTACCTCTACAAGATAGACCTCAACAGAAAACTGAAGAGCAACGGTGGCAGCAAGTGTTTGAGTTTGATAGTTCCTCACATTAAATTATTGACTTTAGAGATATATTAATATGGAGAAGACTAAATTGTTTCAAGCACCAACAGAGCCAAAAGTGTCCCTTGTTTCAAAGAGAGGAGGACTTTCATTGACATTTTATGGTTAGAGGAAAATTGAAAGCTAAGTAGTGGTAATTCTAAGGATTCCTGAAGGAAAAAAGAGAGATGTCTCCTACATTGCTCGTAATATGTGGAAGTATCGACGTCATTTCATAGAGTCATTCGGTCTGAATGCTACATGAGAACATAAGCCAGATGAAGGAATGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTTGATAGATTTGGA

Coding sequence (CDS)

ATGACGATATATTTATACAAAACTTCTAGCTTGAGCTCGAGTTGCAATGGAGCCGTAGACAATCCACGAAAGAATTGGATATATGGACAACATCATTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACTGCAGTGCATAGAGGGGGAGGTTATAAGCGTCTATACTGTCCAATCTCTTTTGGAAGGAAAAAGACATATATGGTAGAATCATAA

Protein sequence

MTIYLYKTSSLSSSCNGAVDNPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRLYCPISFGRKKTYMVES
Homology
[Close]
BLAST of MELO3C035264.2 vs. NCBI nr
Match: YP_009228806.1 (ribosomal protein L2 (chloroplast) [Metanarthecium luteoviride] >YP_009228826.1 ribosomal protein L2 (chloroplast) [Metanarthecium luteoviride] >ALS19946.1 ribosomal protein L2 (chloroplast) [Metanarthecium luteoviride] >ALS19947.1 ribosomal protein L2 (chloroplast) [Metanarthecium luteoviride])

HSP 1 Score: 95.5 bits (236), Expect = 7.7e-17
Identity = 50/70 (71.43%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKSNPRKNLIYGQHHCGKGRNARGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. NCBI nr
Match: YP_319805.1 (ribosomal protein L2 [Acorus calamus] >YP_319826.1 ribosomal protein L2 [Acorus calamus] >YP_001586223.1 ribosomal protein L2 [Acorus americanus] >YP_001586244.1 ribosomal protein L2 [Acorus americanus] >Q3V4X1.1 RecName: Full=50S ribosomal protein L2, chloroplastic >A9LYE2.1 RecName: Full=50S ribosomal protein L2, chloroplastic >CAI53836.1 ribosomal protein L2 (plastid) [Acorus calamus] >CAI53857.1 ribosomal protein L2 (plastid) [Acorus calamus] >ABX38785.1 ribosomal protein L2 (chloroplast) [Acorus americanus] >ABX38806.1 ribosomal protein L2 (chloroplast) [Acorus americanus])

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 50/70 (71.43%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPR N IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R K
Sbjct: 61 YRKIDFRRNK 69

[Close]
BLAST of MELO3C035264.2 vs. NCBI nr
Match: YP_009454673.1 (ribosomal protein L2 (chloroplast) [Alnus cordata] >YP_009454758.1 ribosomal protein L2 (chloroplast) [Alnus incana] >YP_009454843.1 ribosomal protein L2 (chloroplast) [Alnus japonica] >YP_009454928.1 ribosomal protein L2 (chloroplast) [Alnus maximowiczii] >YP_009455013.1 ribosomal protein L2 (chloroplast) [Alnus nitida] >YP_009455098.1 ribosomal protein L2 (chloroplast) [Alnus orientalis] >YP_009455183.1 ribosomal protein L2 (chloroplast) [Alnus rubra] >YP_009455268.1 ribosomal protein L2 (chloroplast) [Alnus subcordata] >AUG61007.1 ribosomal protein L2 (chloroplast) [Alnus alnobetula subsp. crispa] >AUG61094.1 ribosomal protein L2 (chloroplast) [Alnus alnobetula subsp. suaveolens] >AUG61179.1 ribosomal protein L2 (chloroplast) [Alnus cordata] >AUG61262.1 ribosomal protein L2 (chloroplast) [Alnus alnobetula subsp. alnobetula] >AUG61347.1 ribosomal protein L2 (chloroplast) [Alnus glutinosa subsp. betuloides] >AUG61434.1 ribosomal protein L2 (chloroplast) [Alnus cordata] >AUG61517.1 ribosomal protein L2 (chloroplast) [Alnus glutinosa subsp. barbata] >AUG61602.1 ribosomal protein L2 (chloroplast) [Alnus glutinosa subsp. glutinosa] >AUG61656.1 ribosomal protein L2 (chloroplast) [Alnus glutinosa subsp. glutinosa] >AUG61774.1 ribosomal protein L2 (chloroplast) [Alnus glutinosa subsp. glutinosa] >AUG61857.1 ribosomal protein L2 (chloroplast) [Alnus incana] >AUG61996.1 ribosomal protein L2 (chloroplast) [Alnus japonica] >AUG61944.1 ribosomal protein L2 (chloroplast) [Alnus incana] >AUG62114.1 ribosomal protein L2 (chloroplast) [Alnus jorullensis subsp. jorullensis] >AUG62199.1 ribosomal protein L2 (chloroplast) [Alnus maritima subsp. maritima] >AUG62284.1 ribosomal protein L2 (chloroplast) [Alnus maritima subsp. maritima] >AUG62367.1 ribosomal protein L2 (chloroplast) [Alnus maritima subsp. oklahomensis] >AUG62452.1 ribosomal protein L2 (chloroplast) [Alnus maximowiczii] >AUG62537.1 ribosomal protein L2 (chloroplast) [Alnus nitida] >AUG62591.1 ribosomal protein L2 (chloroplast) [Alnus orientalis] >AUG62707.1 ribosomal protein L2 (chloroplast) [Alnus rubra] >AUG62794.1 ribosomal protein L2 (chloroplast) [Alnus subcordata])

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRN+RGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKYNPRKNLIYGQHHCGKGRNSRGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. NCBI nr
Match: AVN97965.1 (ribosomal protein L2 (chloroplast) [Alnus rubra] >AVN97995.1 ribosomal protein L2 (chloroplast) [Alnus rubra])

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRN+RGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKYNPRKNLIYGQHHCGKGRNSRGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. NCBI nr
Match: AEK71544.1 (ribosomal protein L2 (plastid) [Picramnia pentandra])

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-16
Identity = 49/70 (70.00%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+  S+ N AVD     NPRKNWIYGQH CGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-PSTRNVAVDSQVKSNPRKNWIYGQHRCGKGRNARGIITARHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R K
Sbjct: 61 YRKIDFRRNK 69

[Close]
BLAST of MELO3C035264.2 vs. TAIR10
Match: ATCG00830.1 (ribosomal protein L2)

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-18
Identity = 47/68 (69.12%), Postives = 51/68 (75.00%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+  S+ NGAVD     NPR N I GQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-PSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRL 60

Query: 61 YCPISFGR 64
          Y  I F R
Sbjct: 61 YRKIDFRR 67

[Close]
BLAST of MELO3C035264.2 vs. TAIR10
Match: ATCG01310.1 (ribosomal protein L2)

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-18
Identity = 47/68 (69.12%), Postives = 51/68 (75.00%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+  S+ NGAVD     NPR N I GQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-PSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRL 60

Query: 61 YCPISFGR 64
          Y  I F R
Sbjct: 61 YRKIDFRR 67

[Close]
BLAST of MELO3C035264.2 vs. Swiss-Prot
Match: sp|A9LYE2|RK2_ACOAM (50S ribosomal protein L2, chloroplastic OS=Acorus americanus OX=263995 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.3e-19
Identity = 50/70 (71.43%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPR N IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R K
Sbjct: 61 YRKIDFRRNK 69

[Close]
BLAST of MELO3C035264.2 vs. Swiss-Prot
Match: sp|Q3V4X1|RK2_ACOCL (50S ribosomal protein L2, chloroplastic OS=Acorus calamus OX=4465 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.3e-19
Identity = 50/70 (71.43%), Postives = 54/70 (77.14%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPR N IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R K
Sbjct: 61 YRKIDFRRNK 69

[Close]
BLAST of MELO3C035264.2 vs. Swiss-Prot
Match: sp|A4QKN3|RK2_CAPBU (50S ribosomal protein L2, chloroplastic OS=Capsella bursa-pastoris OX=3719 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-18
Identity = 49/68 (72.06%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M IYLYKTS+  S+ NGAVD     NPR N IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIYLYKTST-PSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITARHRGGGHKRL 60

Query: 61 YCPISFGR 64
          Y  I F R
Sbjct: 61 YRKIDFRR 67

[Close]
BLAST of MELO3C035264.2 vs. Swiss-Prot
Match: sp|A6MMG4|RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus OX=13006 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-18
Identity = 48/70 (68.57%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+  S+ NGAVD     NPR N IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-PSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. Swiss-Prot
Match: sp|A6MMI6|RK2B_CHLSC (50S ribosomal protein L2-B, chloroplastic OS=Chloranthus spicatus OX=13006 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-18
Identity = 48/70 (68.57%), Postives = 53/70 (75.71%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+  S+ NGAVD     NPR N IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-PSTRNGAVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. TrEMBL
Match: tr|A0A0U2W094|A0A0U2W094_9LILI (50S ribosomal protein L2, chloroplastic OS=Metanarthecium luteoviride OX=1112727 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.1e-17
Identity = 50/70 (71.43%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRNARGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKSNPRKNLIYGQHHCGKGRNARGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. TrEMBL
Match: tr|A0A2H5A5A1|A0A2H5A5A1_9ROSI (50S ribosomal protein L2, chloroplastic OS=Alnus cordata OX=109058 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRN+RGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKYNPRKNLIYGQHHCGKGRNSRGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. TrEMBL
Match: tr|A0A2H5A866|A0A2H5A866_ALNMA (50S ribosomal protein L2, chloroplastic OS=Alnus maritima subsp. maritima OX=2004887 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRN+RGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKYNPRKNLIYGQHHCGKGRNSRGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. TrEMBL
Match: tr|A0A2H5A7F2|A0A2H5A7F2_ALNIN (50S ribosomal protein L2, chloroplastic OS=Alnus incana OX=3516 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRN+RGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKYNPRKNLIYGQHHCGKGRNSRGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

[Close]
BLAST of MELO3C035264.2 vs. TrEMBL
Match: tr|A0A2H5A6I6|A0A2H5A6I6_ALNGL (50S ribosomal protein L2, chloroplastic OS=Alnus glutinosa subsp. glutinosa OX=2004886 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0 

Query: 1  MTIYLYKTSSLSSSCNGAVD-----NPRKNWIYGQHHCGKGRNARGIITAVHRGGGYKRL 60
          M I+LYKTS+ SS+ NGAVD     NPRKN IYGQHHCGKGRN+RGIITA HRGGG+KRL
Sbjct: 1  MAIHLYKTST-SSTRNGAVDSQVKYNPRKNLIYGQHHCGKGRNSRGIITAGHRGGGHKRL 60

Query: 61 YCPISFGRKK 66
          Y  I F R +
Sbjct: 61 YRKIDFRRNE 69

The following BLAST results are available for this feature:
BLAST of MELO3C035264.2 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009228806.17.7e-1771.43ribosomal protein L2 (chloroplast) [Metanarthecium luteoviride] >YP_009228826.1 ... [more]
YP_319805.11.0e-1671.43ribosomal protein L2 [Acorus calamus] >YP_319826.1 ribosomal protein L2 [Acorus ... [more]
YP_009454673.11.7e-1670.00ribosomal protein L2 (chloroplast) [Alnus cordata] >YP_009454758.1 ribosomal pro... [more]
AVN97965.11.7e-1670.00ribosomal protein L2 (chloroplast) [Alnus rubra] >AVN97995.1 ribosomal protein L... [more]
AEK71544.12.9e-1670.00ribosomal protein L2 (plastid) [Picramnia pentandra][more]
BLAST of MELO3C035264.2 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00830.12.9e-1869.12ribosomal protein L2[more]
ATCG01310.12.9e-1869.12ribosomal protein L2[more]
BLAST of MELO3C035264.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A9LYE2|RK2_ACOAM3.3e-1971.4350S ribosomal protein L2, chloroplastic OS=Acorus americanus OX=263995 GN=rpl2-A... [more]
sp|Q3V4X1|RK2_ACOCL3.3e-1971.4350S ribosomal protein L2, chloroplastic OS=Acorus calamus OX=4465 GN=rpl2-A PE=3... [more]
sp|A4QKN3|RK2_CAPBU1.2e-1872.0650S ribosomal protein L2, chloroplastic OS=Capsella bursa-pastoris OX=3719 GN=rp... [more]
sp|A6MMG4|RK2A_CHLSC3.6e-1868.5750S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus OX=13006 GN=rp... [more]
sp|A6MMI6|RK2B_CHLSC3.6e-1868.5750S ribosomal protein L2-B, chloroplastic OS=Chloranthus spicatus OX=13006 GN=rp... [more]
BLAST of MELO3C035264.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0U2W094|A0A0U2W094_9LILI5.1e-1771.4350S ribosomal protein L2, chloroplastic OS=Metanarthecium luteoviride OX=1112727... [more]
tr|A0A2H5A5A1|A0A2H5A5A1_9ROSI1.1e-1670.0050S ribosomal protein L2, chloroplastic OS=Alnus cordata OX=109058 GN=rpl2 PE=3 ... [more]
tr|A0A2H5A866|A0A2H5A866_ALNMA1.1e-1670.0050S ribosomal protein L2, chloroplastic OS=Alnus maritima subsp. maritima OX=200... [more]
tr|A0A2H5A7F2|A0A2H5A7F2_ALNIN1.1e-1670.0050S ribosomal protein L2, chloroplastic OS=Alnus incana OX=3516 GN=rpl2 PE=3 SV=... [more]
tr|A0A2H5A6I6|A0A2H5A6I6_ALNGL1.1e-1670.0050S ribosomal protein L2, chloroplastic OS=Alnus glutinosa subsp. glutinosa OX=2... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005622 intracellular
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0009536 plastid
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035264.2.1MELO3C035264.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 21..71
e-value: 1.6E-10
score: 42.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 20..68

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035264.2Cucumber (Gy14) v2cgybmedB021
MELO3C035264.2Cucumber (Gy14) v1cgymedB240
MELO3C035264.2Cucumber (Gy14) v1cgymedB307
MELO3C035264.2Cucurbita maxima (Rimu)cmamedB215
MELO3C035264.2Cucurbita maxima (Rimu)cmamedB451
MELO3C035264.2Cucurbita maxima (Rimu)cmamedB751
MELO3C035264.2Cucurbita maxima (Rimu)cmamedB850
MELO3C035264.2Cucurbita moschata (Rifu)cmomedB203
MELO3C035264.2Cucurbita moschata (Rifu)cmomedB439
MELO3C035264.2Cucurbita moschata (Rifu)cmomedB748
MELO3C035264.2Cucurbita moschata (Rifu)cmomedB844
MELO3C035264.2Cucurbita pepo (Zucchini)cpemedB453
MELO3C035264.2Cucurbita pepo (Zucchini)cpemedB561
MELO3C035264.2Cucurbita pepo (Zucchini)cpemedB589
MELO3C035264.2Cucumber (Chinese Long) v2cumedB023
MELO3C035264.2Cucurbita pepo (Zucchini)cpemedB935
MELO3C035264.2Wild cucumber (PI 183967)cpimedB024
MELO3C035264.2Wild cucumber (PI 183967)cpimedB173
MELO3C035264.2Cucumber (Chinese Long) v2cumedB172
MELO3C035264.2Melon (DHL92) v3.6.1medmedB070
MELO3C035264.2Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C035264.2Watermelon (Charleston Gray)medwcgB123
MELO3C035264.2Watermelon (Charleston Gray)medwcgB141
MELO3C035264.2Watermelon (97103) v1medwmB142
MELO3C035264.2Watermelon (97103) v1medwmB143
MELO3C035264.2Silver-seed gourdcarmedB0160
MELO3C035264.2Silver-seed gourdcarmedB0392
MELO3C035264.2Silver-seed gourdcarmedB0451
MELO3C035264.2Silver-seed gourdcarmedB0674
MELO3C035264.2Cucumber (Chinese Long) v3cucmedB023
MELO3C035264.2Watermelon (97103) v2medwmbB142
MELO3C035264.2Watermelon (97103) v2medwmbB136
MELO3C035264.2Wax gourdmedwgoB164