MELO3C035142.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035142.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDDE_4 domain-containing protein
Locationchr11 : 25134184 .. 25135379 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTGCACAAAGTGCAATCTTCTAAACAACCATGTAGAACCTCTAAATTGAGAGGACATGATTATGTGATCGAGTTGTTAAATGGAAACGATAGTAAATGTTTTGACTGTTTAGGATAAAAAAAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCTAAGACAAATCTCCAAGCATCTAGGTATCTCACTGTTCAAGAAAAAGTTGCATTATTCTTATTAATCATATCACATAATAAAAGCAATTGTATAGCAACAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAACCTTGTTTTGAGGAAGGTTTGCAAACTTGGACTAGAAATTATTAGCCCACCCAATATGGACACTTTACCAATGGAGATCGTATTAAATTCAAAATATTACTCATTCTTTAAGGTAATGCGTTAATGTTTTGAAATATTACCCTCTCTTTCACGGAGTTGATACTAATTCAAAATATATTTGTGTTTATGATTATCCTTTAGAATTATATTGGTGTTATTGACGACACTCATGTTGATGCAAGTGTTCTTCAAAATGAACAAATATCGTTTCGTGGAAGAAAAACTAACACAACATGGAATATAATGTGTGTCTGTTCATTTGATATGTTATTCATGTATGTCAGGTCTAGTTAGGAAGGATCAACTAATGATTTTTGCATACTTCTTGAATGTATCAAGAATCCCAAGAATAAATGTCCTATGCCTAAGAAAGGTAAATAATTATGTGTTTTTAGAACTTTAAATAAAATGGATGACTTTATGATAATTTTTTTTTTTATTTGCTTTATTATATGCAGATCAATACTATCTTGTCAATTCAGGATCTTCAAATATACAAGGATTTTTAACACTATTTCGTGGTCAAAGATATCATTTACGAGATTTAGAGAAAGGAGACATCGCCCTCGAGGTAAAGAAGAAGTGTTTAACTATTGATATTCTTCACTGTGAGATGTCATCGAATGTTATTTTGGTGTGTTGAATGCTCAATTTCCTATTAAAATGCCTCCATACCCGATCAAGACACAAAAATATATACCGATAGTATGTTGAACAATTTACAATTATATTAGATTGAATGATCGTCAACATCATCGATCTATTCAATAACTTTAGCAATCAATCAATGATCATCAAAGATACACATAATTTGTCTGCCAATTTGTAG

mRNA sequence

ATGAGCTTGCACAAAGTGCAATCTTCTAAACAACCATGTAGAACCTCTAAATTGAGAGGACATGATTATGTGATCGAGTTGTTAAATGGAAACGATAATCAATACTATCTTGTCAATTCAGGATCTTCAAATATACAAGGATTTTTAACACTATTTCGTGGTCAAAGATATCATTTACGAGATTTAGAGAAAGGAGACATCGCCCTCGAGGTAAAGAAGAAGTGTTTAACTATTGATATTCTTCACTGTGAGATGTCATCGAATGTTATTTTGGTGTGTTGAATGCTCAATTTCCTATTAAAATGCCTCCATACCCGATCAAGACACAAAAATATATACCGATAGTATGTTGAACAATTTACAATTATATTAGATTGAATGATCGTCAACATCATCGATCTATTCAATAACTTTAGCAATCAATCAATGATCATCAAAGATACACATAATTTGTCTGCCAATTTGTAG

Coding sequence (CDS)

ATGAGCTTGCACAAAGTGCAATCTTCTAAACAACCATGTAGAACCTCTAAATTGAGAGGACATGATTATGTGATCGAGTTGTTAAATGGAAACGATAATCAATACTATCTTGTCAATTCAGGATCTTCAAATATACAAGGATTTTTAACACTATTTCGTGGTCAAAGATATCATTTACGAGATTTAGAGAAAGGAGACATCGCCCTCGAGGTAAAGAAGAAGTGTTTAACTATTGATATTCTTCACTGTGAGATGTCATCGAATGTTATTTTGGTGTGTTGA

Protein sequence

MSLHKVQSSKQPCRTSKLRGHDYVIELLNGNDNQYYLVNSGSSNIQGFLTLFRGQRYHLRDLEKGDIALEVKKKCLTIDILHCEMSSNVILVC
Homology
[Close]
BLAST of MELO3C035142.2 vs. NCBI nr
Match: OMP02308.1 (hypothetical protein CCACVL1_02836 [Corchorus capsularis])

HSP 1 Score: 69.7 bits (169), Expect = 5.9e-09
Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 10  KQPCRTSKLRGHDYVIELLNGNDNQYYLVNSGSSNIQGFLTLFRGQRYHLRD 62
           KQPCR S+L G+ ++ E+L+G+D +YYLV+SG +N+ GFL+ + G RYHLRD
Sbjct: 170 KQPCRVSQLSGYAFLQEILHGHDRKYYLVDSGYTNMHGFLSSYCGDRYHLRD 221

[Close]
BLAST of MELO3C035142.2 vs. NCBI nr
Match: XP_022843629.1 (uncharacterized protein LOC111367135 isoform X1 [Olea europaea var. sylvestris] >XP_022843630.1 uncharacterized protein LOC111367135 isoform X1 [Olea europaea var. sylvestris] >XP_022843631.1 uncharacterized protein LOC111367135 isoform X1 [Olea europaea var. sylvestris])

HSP 1 Score: 53.1 bits (126), Expect = 5.7e-04
Identity = 24/58 (41.38%), Postives = 39/58 (67.24%), Query Frame = 0 

Query: 32  DNQYYLVNSGSSNIQGFLTLFRGQRYHLRDLEKGDIALEVKKKCLTIDILHCEMSSNV 90
           D++YYLV++G  N++ +L L++G+RYHL D  +  + LE  +K L + I H E+  NV
Sbjct: 189 DDKYYLVDAGYPNMKCYLALYKGERYHLPDFRRVVVNLEALEKFLIMHITHYEVLLNV 246

[Close]
BLAST of MELO3C035142.2 vs. NCBI nr
Match: XP_022843633.1 (uncharacterized protein LOC111367135 isoform X3 [Olea europaea var. sylvestris])

HSP 1 Score: 53.1 bits (126), Expect = 5.7e-04
Identity = 24/58 (41.38%), Postives = 39/58 (67.24%), Query Frame = 0 

Query: 32  DNQYYLVNSGSSNIQGFLTLFRGQRYHLRDLEKGDIALEVKKKCLTIDILHCEMSSNV 90
           D++YYLV++G  N++ +L L++G+RYHL D  +  + LE  +K L + I H E+  NV
Sbjct: 145 DDKYYLVDAGYPNMKCYLALYKGERYHLPDFRRVVVNLEALEKFLIMHITHYEVLLNV 202

[Close]
BLAST of MELO3C035142.2 vs. TrEMBL
Match: tr|A0A1R3K5Q1|A0A1R3K5Q1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_02836 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-09
Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 10  KQPCRTSKLRGHDYVIELLNGNDNQYYLVNSGSSNIQGFLTLFRGQRYHLRD 62
           KQPCR S+L G+ ++ E+L+G+D +YYLV+SG +N+ GFL+ + G RYHLRD
Sbjct: 170 KQPCRVSQLSGYAFLQEILHGHDRKYYLVDSGYTNMHGFLSSYCGDRYHLRD 221

The following BLAST results are available for this feature:
BLAST of MELO3C035142.2 vs. NCBI nr
Match NameE-valueIdentityDescription
OMP02308.15.9e-0955.77hypothetical protein CCACVL1_02836 [Corchorus capsularis][more]
XP_022843629.15.7e-0441.38uncharacterized protein LOC111367135 isoform X1 [Olea europaea var. sylvestris] ... [more]
XP_022843633.15.7e-0441.38uncharacterized protein LOC111367135 isoform X3 [Olea europaea var. sylvestris][more]
BLAST of MELO3C035142.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035142.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035142.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1R3K5Q1|A0A1R3K5Q1_COCAP3.9e-0955.77Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_02836 PE=4 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035142.2.1MELO3C035142.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035142.2Silver-seed gourdcarmedB0028
MELO3C035142.2Silver-seed gourdcarmedB0347
MELO3C035142.2Silver-seed gourdcarmedB0395
MELO3C035142.2Silver-seed gourdcarmedB0541
MELO3C035142.2Cucumber (Chinese Long) v3cucmedB437
MELO3C035142.2Cucumber (Chinese Long) v3cucmedB516
MELO3C035142.2Watermelon (97103) v2medwmbB086
MELO3C035142.2Watermelon (97103) v2medwmbB120
MELO3C035142.2Wax gourdmedwgoB113
MELO3C035142.2Wax gourdmedwgoB129
MELO3C035142.2Cucumber (Gy14) v2cgybmedB383
MELO3C035142.2Cucumber (Gy14) v2cgybmedB448
MELO3C035142.2Cucumber (Gy14) v1cgymedB173
MELO3C035142.2Cucumber (Gy14) v1cgymedB402
MELO3C035142.2Cucurbita maxima (Rimu)cmamedB091
MELO3C035142.2Cucurbita maxima (Rimu)cmamedB522
MELO3C035142.2Cucurbita maxima (Rimu)cmamedB569
MELO3C035142.2Cucurbita moschata (Rifu)cmomedB084
MELO3C035142.2Cucurbita moschata (Rifu)cmomedB511
MELO3C035142.2Cucurbita moschata (Rifu)cmomedB557
MELO3C035142.2Cucurbita pepo (Zucchini)cpemedB252
MELO3C035142.2Cucurbita pepo (Zucchini)cpemedB301
MELO3C035142.2Cucurbita pepo (Zucchini)cpemedB707
MELO3C035142.2Cucurbita pepo (Zucchini)cpemedB785
MELO3C035142.2Wild cucumber (PI 183967)cpimedB433
MELO3C035142.2Wild cucumber (PI 183967)cpimedB502
MELO3C035142.2Cucumber (Chinese Long) v2cumedB424
MELO3C035142.2Cucumber (Chinese Long) v2cumedB492
MELO3C035142.2Melon (DHL92) v3.6.1medmedB042
MELO3C035142.2Bottle gourd (USVL1VR-Ls)lsimedB057
MELO3C035142.2Bottle gourd (USVL1VR-Ls)lsimedB092
MELO3C035142.2Watermelon (Charleston Gray)medwcgB073
MELO3C035142.2Watermelon (Charleston Gray)medwcgB087
MELO3C035142.2Watermelon (97103) v1medwmB081
MELO3C035142.2Watermelon (97103) v1medwmB106