MELO3C035024.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035024.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCalcineurin-like metallo-phosphoesterase superfamily protein
Locationchr11 : 16867196 .. 16870695 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTTGAGATTGAAGATCAGTTAGTGTTATATTGCCAATTTAAATAAACTTGTACAAAAACTATAAGCAAATTTACCTCAACTATGGTATATATATTTTCCTTCAATTCTCTGCAAGCACATCTGTCCATGTCGCATAGATATGGGGATGTGGTAGTGTATACACCACCCGATAAAAGAGTTTAGCTTTGCCCCATTTTCTCCAATCACTATTAGAAAAATGGATTTTAATGACACTACTAATCAAAACATTGTGTCATTCAAAATAAAAAAGGTGGGGTGGAGTAAAATGTGTCGTTGAAAATAAAAATTGCAGAATTTTTCTTCACACAATTTTCTTGAAATAATTTTCACGTCGTTAATTAATGACATAATTTTTGTGTCATTAAAAATTTTCACACATAAATAAAAACCTAATTCCAAAATTAAAAAGAAAAACAAAAAAATCCCTTTCTTCGTACACACGCTCATCCCTCGAAAAACCATTGGTTTAAGCTCGCATCAGTCATCTCCAAGGCTCTCGAAAAAACCCTCGCATCATCTCGCACTGCCGTCATCTTCGTTCGCCATCTTCCGACGTTCAAATTGTGATAGTTCCGTTCGCGTCAGTCATCTCCACCATCATCTCCATTTGCGTCAGTCATCTCGCACCACCATCCGAATTGTGATAGCTCCTCTATATGGTTCTTCAACTATGCTTCTCTCTTTTTTTTTTTTCAGATTTGTCTCCTCTCTTTCTGTTTACCTATTTTCTTTGTTCTGGGGTTTACTGATTTCTGTTGAAATCAGATTCTCGTTTTACTGTTCAGATGGATCGGTACGACATAATGGATTGGCCAAGAGCTGAGACTTTTTGTGTGAGTGGTGGAAAAAATCAGACTTTTTATCTTCTTATTCTTTCTTGTTCTTTTCGTCTTAGATTTGATCTTGGTTTTCGACCAACCTATTATATTTTTAACTTCTTCCACTACTATACTCTTGTTGCTATTTACATCGTGCTGTGGATTGTGTTTTCAATTTCTTATGTTGAATGTTAAGTGGGTTTTCATGTGGGTGTCTTACCCATTTGTATTTTACTCTGAACCTTGCTAAATTGGTTTGTTAATGTGAGATTGACATTCGTGTTTTGATGTAATTTTGAGGTGAATTTCATTTCCTACTATTGATTTGAAATATGATCTATATTGTTGATAGCTAATTGCTTCTTTGCGTGAGGTGCTTTGATGAGAGCTATGAATACCGTTTTTCTTTTTTCAGATTTTTTTTTTCCAATTGGATGGTTTCCTTTATATTTGTTGGCAGCATTGGCTTGGTAGATTATTGAATTACACTATGGTTCTTTATACATCTGGTACTTCTTTTTAAGGATTTTCTTTTTCCTATATTATACAGTATCATAGTGAGCTTCATCTCTGTAAAACATACAGAATAACTACCTAAGCTAAGATAAACATTCTTTAAATTTTTTTCATGATCTCAATTTTTTCTTTATCTCAAAGTTCATGGTCTCAAACATTATGAGACTTACAATACAATTAACTTTGAAGTTCCTTTCTTTTCCCTTAAGGTTCTGTGTACAAAAGATGGTTCCTAACAATTATTGCTTTCTTTCTTAATTAAAAAAAAAACTCGTTAAGGCTTATGTCCATATATCTACATTTTGATAGTCTTGAAGTGCTAGATATTTTGTTGTTCAAAATTGCTTTATGATTCATTTATAAATTTAGGTAGAGAAGTTCATCACTTGTCAAAATATTTCATTTCATTATGAAAATATAGGAAGGGTACAAAGAAGCCTAAGGAACAATACTTTACTCTTGCAAGATAAAAGAATAAAAGAATAATTCGCATGTATAATCTCAGGATTTTTGTTTTTCTCATAACTTATTTGAATAATGTGGTTCTTTTTATAGGACAAGGTATTATGGGAGGAGACATTTTAATGTAGTAATGCAAAAGTTCAATGGGGCAAGTTAATTTTATGGTGCTATGTTATGTGACACGACATGAATTTCAAGTATTTCTATCTGCTAACTTGAATCGAAATCAACAATAAGTGCAGAAGCCAAAGAACAGGACTCAATTTGTTGATAACAAACTATAGTTATTGTTGTTTTTTATCTTCAAAGTTGATATTTATTAGTTTTATTTTCTCTTTTTTGTGTTTTTCTAGGTATCGATACTAGTCTTTATTGAGTTCTTTTGTTTTTTGGGACAGGTAATAGTTTTTCAATTTATAAATTTGGTATAAAGTTTACTAAGTTTTCTTAATTTTAAGTTTATTTTCGATTTGGATCCTATCTATGTGGTTATGTTGTGAATTATATTGATTCTGTGTTGTAAAGTTTTATTTAGAGCTTAGTTGTATTAATGCAAGTGACATTTGACAAATTGTGTTTTTTCTTTTGTTTTTATTTATGAGGGCTTGAAAAACTTCGAGGTATGTTCTCTTATATCACATTTCAATCCACGTGGCTCTTATATGATGTTGAGTTTTATTTTCTTCCTGCTTTGGATTTCTTCTTAATTTTGAGTATGAAATCATATGTTTGTGATTGTACTTTTGTAATGATGGCTTCAAATGTAAGTCTACTTGAAGGAGAAGTTTGATATATAAAGTACTTTATATTGTTTTGTCTCATCATTTTCTTTTGGAATTTTCCCTAAATTGCTTTACTCTAATTCTGTTTGTCTTGGATCCTATGAAAGATATTCTCTCATCAATGTCCTTTTTGAATCTAGAACTCAACATTCTTATCAGATTCTTAGAAAGCTTTGATCCAGATAATAGAAACGAGGTTTAGGATTAATGCAAATATTAGTCATCCAGAGGTTTAGGATTATTGACTTATCTACTGAGTTATGCTTTAATTGATATCATTCTTCACTAGCTTGGCAAAATAATTCACTACATTTCATATTGCAACACTCAGGCTTCGCTTGCCTCGGTAATTTGTTCCAAAGGCAAATCATTTGTCTTGGAGATTGATAATAAGCTGTGTAATATTCTTCTATGCATCCAATTTGACAATACTTAAAACTATGCACATCTTTCACTGCTTTTGAGGTGTTGAATTGCTCCACCCACATCCCCGTACTCACATCTTCCATCTTAAATAACTGTAAAAAACATAATAGTTCCCTCTTTTAAGCCAAAATCATTTGAATTTTAACTAATGTTCGAAGTGAATGTATATGTACCCTTAATTTACGTCTCTCGAAGTTTGATATGACAAACTGAGCAATATCGAATGACACTATGTACCTCGATTCATTTGGGTAAGGTGGATAATCTTCTTCTAGCCATTCCCATTTAGTTCTTGTACTTCATTTTTTCTCTCTCTATTTCTAAAACACCATGTGCAGTTTAGATAGATTTTTTAGAATAACATTTTACTTGCTAAAAGTATATGCAAGGTTATCCTAATCCATTAGCATTCACATATGAAAGATGTCTTTTTTATCCTTTCGAATATGCTCTTCAACCTCCACCTTAG

mRNA sequence

ATGCAGCTTGAGATTGAAGATCATCATCTCCAAGGCTCTCGAAAAAACCCTCGCATCATCTCGCACTGCCGTCATCTTCGTTCGCCATCTTCCGACGTTCAAATTGTGATAGTTCCGTTCGCGTCAGTCATCTCCACCATCATCTCCATTTGCGTCAGTCATCTCGCACCACCATCCGAATTATTTGTCTCCTCTCTTTCTGTTTACCTATTTTCTTTGTTCTGGGGTTTACTGATTTCTGTTGAAATCAGATTCTCGTTTTACTGTTCAGATGGATCGGTAGAGAAGTTCATCACTTGTCAAAATATTTCATTTCATTATGAAAATATAGGAAGGGACAAGGTATCGATACTAGTCTTTATTGAGTTCTTTTGTTTTTTGGGACAGGGCTTGAAAAACTTCGAGCTTGGCAAAATAATTCACTACATTTCATATTGCAACACTCAGGCTTCGCTTGCCTCGTATATGCAAGGTTATCCTAATCCATTAGCATTCACATATGAAAGATGTCTTTTTTATCCTTTCGAATATGCTCTTCAACCTCCACCTTAG

Coding sequence (CDS)

ATGCAGCTTGAGATTGAAGATCATCATCTCCAAGGCTCTCGAAAAAACCCTCGCATCATCTCGCACTGCCGTCATCTTCGTTCGCCATCTTCCGACGTTCAAATTGTGATAGTTCCGTTCGCGTCAGTCATCTCCACCATCATCTCCATTTGCGTCAGTCATCTCGCACCACCATCCGAATTATTTGTCTCCTCTCTTTCTGTTTACCTATTTTCTTTGTTCTGGGGTTTACTGATTTCTGTTGAAATCAGATTCTCGTTTTACTGTTCAGATGGATCGGTAGAGAAGTTCATCACTTGTCAAAATATTTCATTTCATTATGAAAATATAGGAAGGGACAAGGTATCGATACTAGTCTTTATTGAGTTCTTTTGTTTTTTGGGACAGGGCTTGAAAAACTTCGAGCTTGGCAAAATAATTCACTACATTTCATATTGCAACACTCAGGCTTCGCTTGCCTCGTATATGCAAGGTTATCCTAATCCATTAGCATTCACATATGAAAGATGTCTTTTTTATCCTTTCGAATATGCTCTTCAACCTCCACCTTAG

Protein sequence

MQLEIEDHHLQGSRKNPRIISHCRHLRSPSSDVQIVIVPFASVISTIISICVSHLAPPSELFVSSLSVYLFSLFWGLLISVEIRFSFYCSDGSVEKFITCQNISFHYENIGRDKVSILVFIEFFCFLGQGLKNFELGKIIHYISYCNTQASLASYMQGYPNPLAFTYERCLFYPFEYALQPPP
Homology
[Close]
BLAST of MELO3C035024.2 vs. TAIR10
Match: AT4G23000.1 (Calcineurin-like metallo-phosphoesterase superfamily protein)

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05
Identity = 20/24 (83.33%), Postives = 21/24 (87.50%), Query Frame = 0 

Query: 159 YPNPLAFTYERCLFYPFEYALQPP 183
           YPNP AFTYE+ LF PFEYALQPP
Sbjct: 437 YPNPSAFTYEKRLFCPFEYALQPP 460

[Close]
BLAST of MELO3C035024.2 vs. TAIR10
Match: AT4G11800.1 (Calcineurin-like metallo-phosphoesterase superfamily protein)

HSP 1 Score: 45.1 bits (105), Expect = 5.6e-05
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0 

Query: 159 YPNPLAFTYERCLFYPFEYALQPP 183
           YPNP +FTYE+ LF PFEYALQPP
Sbjct: 435 YPNPSSFTYEKRLFCPFEYALQPP 458

The following BLAST results are available for this feature:
BLAST of MELO3C035024.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035024.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23000.12.5e-0583.33Calcineurin-like metallo-phosphoesterase superfamily protein[more]
AT4G11800.15.6e-0579.17Calcineurin-like metallo-phosphoesterase superfamily protein[more]
BLAST of MELO3C035024.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035024.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035024.2.1MELO3C035024.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035024.2Cucumber (Gy14) v2cgybmedB390
MELO3C035024.2Cucumber (Gy14) v1cgymedB176
MELO3C035024.2Cucumber (Gy14) v1cgymedB177
MELO3C035024.2Cucurbita maxima (Rimu)cmamedB586
MELO3C035024.2Cucurbita maxima (Rimu)cmamedB623
MELO3C035024.2Cucurbita moschata (Rifu)cmomedB566
MELO3C035024.2Cucurbita moschata (Rifu)cmomedB610
MELO3C035024.2Cucurbita pepo (Zucchini)cpemedB309
MELO3C035024.2Cucurbita pepo (Zucchini)cpemedB808
MELO3C035024.2Wild cucumber (PI 183967)cpimedB414
MELO3C035024.2Wild cucumber (PI 183967)cpimedB440
MELO3C035024.2Cucumber (Chinese Long) v2cumedB405
MELO3C035024.2Cucumber (Chinese Long) v2cumedB431
MELO3C035024.2Bottle gourd (USVL1VR-Ls)lsimedB061
MELO3C035024.2Watermelon (Charleston Gray)medwcgB105
MELO3C035024.2Watermelon (97103) v1medwmB123
MELO3C035024.2Silver-seed gourdcarmedB0032
MELO3C035024.2Silver-seed gourdcarmedB0349
MELO3C035024.2Cucumber (Chinese Long) v3cucmedB444
MELO3C035024.2Watermelon (97103) v2medwmbB104
MELO3C035024.2Wax gourdmedwgoB121