MELO3C034682.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034682.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ATP-binding/protein serine/threonine kinase
Location	chr11 : 3349544 .. 3349941 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTAATCATATAATACTCACCCAACTAGAGAATGAATATGGTGAAGCCCTCGACAAAGTTCGTTCTCATCTTCCTAATGTTCTTCGTTATCTCAGGTATATCAATTAATTTTAATTGCTTATATAGGGCCATTTTTTTTTTTTTTTTTTTTTGCATCAGTTATCTTATTGTATGACAATTTAACAATTACATTAATTGCTTCAGAAACATTGTTCGTGTCAGATGCTAGAAATGTTGTAAACATTCCATGCAAAAGCCGTATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCACATGGATTGGAAAAGAAATTTCTTCCTACAGCCTTTTCTGAACATTTGAGAGAAGATAATACAATGCTCCTTTAA

mRNA sequence

CTTCCTAATCATATAATACTCACCCAACTAGAGAATGAATATGGTGAAGCCCTCGACAAAGTTCGTTCTCATCTTCCTAATGTTCTTCGTTATCTCAGTTATCTTATTGTATGACAATTTAACAATTACATTAATTGCTTCAGAAACATTGTTCGTGTCAGATGCTAGAAATGTTGTAAACATTCCATGCAAAAGCCGTATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCACATGGATTGGAAAAGAAATTTCTTCCTACAGCCTTTTCTGAACATTTGAGAGAAGATAATACAATGCTCCTTTAA

Coding sequence (CDS)

ATGAATATGGTGAAGCCCTCGACAAAGTTCGTTCTCATCTTCCTAATGTTCTTCGTTATCTCAGTTATCTTATTGTATGACAATTTAACAATTACATTAATTGCTTCAGAAACATTGTTCGTGTCAGATGCTAGAAATGTTGTAAACATTCCATGCAAAAGCCGTATTGATTGTTCTGATCCATGGGATTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCACATGGATTGGAAAAGAAATTTCTTCCTACAGCCTTTTCTGAACATTTGAGAGAAGATAATACAATGCTCCTTTAA

Protein sequence

MNMVKPSTKFVLIFLMFFVISVILLYDNLTITLIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPHGLEKKFLPTAFSEHLREDNTMLL

Homology

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BLAST of MELO3C034682.2 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_2G276990 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 66/92 (71.74%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 3  MVKPSTKFVLIFLMFFVISVILLYDNLTITLIASETLFVSDARNVVNIPCKSRIDCSDPW 62
          MVKP TKF L FLM F+I               SE LFVSDARNVVNIPC+SRIDCSDPW
Sbjct: 1  MVKPLTKFALFFLMVFII---------------SEKLFVSDARNVVNIPCQSRIDCSDPW 60

Query: 63 DCDCKLNLCFCHPHGLEKKFLPTAFSEHLRED 95
          DCDCKLNLCFCHPHGLEKKFL  AF E LRED
Sbjct: 61 DCDCKLNLCFCHPHGLEKKFLHKAFPESLRED 77

[Close]

BLAST of MELO3C034682.2 vs. NCBI nr
Match: KGN61993.1 (hypothetical protein Csa_2G285280 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 6.7e-27
Identity = 66/97 (68.04%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 3   MVKPSTKFVLIFLMFFVISVILLYDNLTITLIASETLFVSDARNVVNIPCKSRIDCSDPW 62
           MVK STK  L+ LMFF+I               SET FV+DARNVVNIPC SRIDCSDPW
Sbjct: 1   MVKSSTKLALLLLMFFII---------------SET-FVADARNVVNIPCNSRIDCSDPW 60

Query: 63  DCDCKLNLCFCHPHGLEKKFLPTAFSEHLREDNTMLL 100
           DCDCKLNLCFCHPHGLEKKFL  AF EHLRE+ T  L
Sbjct: 61  DCDCKLNLCFCHPHGLEKKFLHNAFPEHLREEKTTSL 81

[Close]

BLAST of MELO3C034682.2 vs. NCBI nr
Match: OMO57769.1 (ATP-binding/protein serine/threonine kinase [Corchorus olitorius])

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 43 DARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPHGLEKKFLPTAFSEHLREDNTML 99
          +ARN +NIPC +  DC DP  C+C++NLCFCHP  +         + H+ +DN  L
Sbjct: 27 EARN-INIPCNTIKDCPDPVKCECRINLCFCHPAAM------FVAANHVAKDNPKL 75

[Close]

BLAST of MELO3C034682.2 vs. TrEMBL
Match: tr|A0A0A0LMG3|A0A0A0LMG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.8e-28
Identity = 66/92 (71.74%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 3  MVKPSTKFVLIFLMFFVISVILLYDNLTITLIASETLFVSDARNVVNIPCKSRIDCSDPW 62
          MVKP TKF L FLM F+I               SE LFVSDARNVVNIPC+SRIDCSDPW
Sbjct: 1  MVKPLTKFALFFLMVFII---------------SEKLFVSDARNVVNIPCQSRIDCSDPW 60

Query: 63 DCDCKLNLCFCHPHGLEKKFLPTAFSEHLRED 95
          DCDCKLNLCFCHPHGLEKKFL  AF E LRED
Sbjct: 61 DCDCKLNLCFCHPHGLEKKFLHKAFPESLRED 77

[Close]

BLAST of MELO3C034682.2 vs. TrEMBL
Match: tr|A0A0A0LJR0|A0A0A0LJR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.4e-27
Identity = 66/97 (68.04%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 3   MVKPSTKFVLIFLMFFVISVILLYDNLTITLIASETLFVSDARNVVNIPCKSRIDCSDPW 62
           MVK STK  L+ LMFF+I               SET FV+DARNVVNIPC SRIDCSDPW
Sbjct: 1   MVKSSTKLALLLLMFFII---------------SET-FVADARNVVNIPCNSRIDCSDPW 60

Query: 63  DCDCKLNLCFCHPHGLEKKFLPTAFSEHLREDNTMLL 100
           DCDCKLNLCFCHPHGLEKKFL  AF EHLRE+ T  L
Sbjct: 61  DCDCKLNLCFCHPHGLEKKFLHNAFPEHLREEKTTSL 81

[Close]

BLAST of MELO3C034682.2 vs. TrEMBL
Match: tr|A0A2N9FRQ0|A0A2N9FRQ0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 29 LTITLIASETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPHGLEKKFLPTAFS 88
          + + LIAS   F  DARNVV IPC++  DC D   CDC  N C C   G E+ F   A +
Sbjct: 12 VVLLLIASSFQFRVDARNVVVIPCETYNDCRDSAKCDCVHNHCRC--PGEEQDFFTKAIT 71

Query: 89 EHLRED 95
           HL+ D
Sbjct: 72 NHLKHD 75

[Close]

BLAST of MELO3C034682.2 vs. TrEMBL
Match: tr|A0A1R3GI95|A0A1R3GI95_9ROSI (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-04
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 43 DARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPHGLEKKFLPTAFSEHLREDNTML 99
          +ARN +NIPC +  DC DP  C+C++NLCFCHP  +         + H+ +DN  L
Sbjct: 27 EARN-INIPCNTIKDCPDPVKCECRINLCFCHPAAM------FVAANHVAKDNPKL 75

The following BLAST results are available for this feature:

BLAST of MELO3C034682.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61957.1	1.0e-27	71.74	hypothetical protein Csa_2G276990 [Cucumis sativus]	[more]
KGN61993.1	6.7e-27	68.04	hypothetical protein Csa_2G285280 [Cucumis sativus]	[more]
OMO57769.1	2.1e-04	42.86	ATP-binding/protein serine/threonine kinase [Corchorus olitorius]	[more]

BLAST of MELO3C034682.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034682.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034682.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LMG3\|A0A0A0LMG3_CUCSA	6.8e-28	71.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1	[more]
tr\|A0A0A0LJR0\|A0A0A0LJR0_CUCSA	4.4e-27	68.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1	[more]
tr\|A0A2N9FRQ0\|A0A2N9FRQ0_FAGSY	1.1e-04	45.45	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1	[more]
tr\|A0A1R3GI95\|A0A1R3GI95_9ROSI	1.4e-04	42.86	ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034682.2.1	MELO3C034682.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C034682.2	Csa2G276990	Cucumber (Chinese Long) v2	cumedB082

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C034682.2	Cucumber (Gy14) v2	cgybmedB079
MELO3C034682.2	Cucumber (Gy14) v2	cgybmedB378
MELO3C034682.2	Cucumber (Gy14) v1	cgymedB122
MELO3C034682.2	Cucumber (Gy14) v1	cgymedB594
MELO3C034682.2	Cucurbita maxima (Rimu)	cmamedB621
MELO3C034682.2	Cucurbita maxima (Rimu)	cmamedB636
MELO3C034682.2	Cucurbita maxima (Rimu)	cmamedB882
MELO3C034682.2	Cucurbita moschata (Rifu)	cmomedB611
MELO3C034682.2	Cucurbita moschata (Rifu)	cmomedB625
MELO3C034682.2	Cucurbita moschata (Rifu)	cmomedB874
MELO3C034682.2	Cucurbita pepo (Zucchini)	cpemedB515
MELO3C034682.2	Cucurbita pepo (Zucchini)	cpemedB794
MELO3C034682.2	Cucurbita pepo (Zucchini)	cpemedB809
MELO3C034682.2	Wild cucumber (PI 183967)	cpimedB425
MELO3C034682.2	Cucumber (Chinese Long) v2	cumedB415
MELO3C034682.2	Melon (DHL92) v3.6.1	medmedB059
MELO3C034682.2	Bottle gourd (USVL1VR-Ls)	lsimedB056
MELO3C034682.2	Bottle gourd (USVL1VR-Ls)	lsimedB135
MELO3C034682.2	Watermelon (Charleston Gray)	medwcgB083
MELO3C034682.2	Watermelon (Charleston Gray)	medwcgB102
MELO3C034682.2	Watermelon (97103) v1	medwmB116
MELO3C034682.2	Silver-seed gourd	carmedB0812
MELO3C034682.2	Silver-seed gourd	carmedB1038
MELO3C034682.2	Silver-seed gourd	carmedB1042
MELO3C034682.2	Cucumber (Chinese Long) v3	cucmedB095
MELO3C034682.2	Cucumber (Chinese Long) v3	cucmedB432
MELO3C034682.2	Watermelon (97103) v2	medwmbB072
MELO3C034682.2	Watermelon (97103) v2	medwmbB101