MELO3C034605.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C034605.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ATP-binding/protein serine/threonine kinase
Location	chr11 : 1533202 .. 1533777 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCTTTCGAATCATATAATACTCACCAACTAGAAATCGAATATGGTGAAAACCTCGACAAAGTTCGCTCTCTTGTTCCTAATGTTTTTTGTTATCTCAGGTATATCAATCAATTTTAACTGTTTATAGCCGATTTTTTTTCTTTTCGCAATAGTTTATCTTGTTGTATGACAATTTAACAATTACATTACTTTAGAAACACTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCGTGGGACTGTGATTGCAAGCTCAACTTATGTTTTTGTCAACCAAATGGATCAGAAAAGAAATTTCTTCACAAAGCCTTTTCTGAATATTTGAGAGATGAAAAGACAACGCTCCTAGAAAATTAACATATGTTCTCCACCCAAATTTAGATCTACATACATAGCTCATAAATCGAAAGAAATTGTATTTTACTACGATATACATAAATAGTATATGACTATAATTTCTCTACCAGAACAGTAATATATGACAGCATAAATAATCAATTCATCGATGTTACGTTTGTATACTCTAATATTAATATCT

mRNA sequence

CAAATCTTTCGAATCATATAATACTCACCAACTAGAAATCGAATATGGTGAAAACCTCGACAAAGTTCGCTCTCTTGTTCCTAATGTTTTTTGTTATCTCAGAAACACTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCGTGGGACTGTGATTGCAAGCTCAACTTATGTTTTTGTCAACCAAATGGATCAGAAAAGAAATTTCTTCACAAAGCCTTTTCTGAATATTTGAGAGATGAAAAGACAACGCTCCTAGAAAATTAACATATGTTCTCCACCCAAATTTAGATCTACATACATAGCTCATAAATCGAAAGAAATTGTATTTTACTACGATATACATAAATAGTATATGACTATAATTTCTCTACCAGAACAGTAATATATGACAGCATAAATAATCAATTCATCGATGTTACGTTTGTATACTCTAATATTAATATCT

Coding sequence (CDS)

ATGGTGAAAACCTCGACAAAGTTCGCTCTCTTGTTCCTAATGTTTTTTGTTATCTCAGAAACACTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCGTGGGACTGTGATTGCAAGCTCAACTTATGTTTTTGTCAACCAAATGGATCAGAAAAGAAATTTCTTCACAAAGCCTTTTCTGAATATTTGAGAGATGAAAAGACAACGCTCCTAGAAAATTAA

Protein sequence

MVKTSTKFALLFLMFFVISETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCQPNGSEKKFLHKAFSEYLRDEKTTLLEN

Homology

[Close]

BLAST of MELO3C034605.2 vs. NCBI nr
Match: KGN61993.1 (hypothetical protein Csa_2G285280 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-30
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MVKTSTKFALLFLMFFVISETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCQPNG 60
          MVK+STK ALL LMFF+ISET FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFC P+G
Sbjct: 1  MVKSSTKLALLLLMFFIISET-FVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLHKAFSEYLRDEKTTLL 83
           EKKFLH AF E+LR+EKTT L
Sbjct: 61 LEKKFLHNAFPEHLREEKTTSL 81

[Close]

BLAST of MELO3C034605.2 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_2G276990 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-29
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 1  MVKTSTKFALLFLMFFVISETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCQPNG 60
          MVK  TKFAL FLM F+ISE LFVSDARNVVNIPC+SRIDCSDPWDCDCKLNLCFC P+G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLHKAFSEYLRDEK 79
           EKKFLHKAF E LR+++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034605.2 vs. TrEMBL
Match: tr|A0A0A0LJR0|A0A0A0LJR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-30
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MVKTSTKFALLFLMFFVISETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCQPNG 60
          MVK+STK ALL LMFF+ISET FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFC P+G
Sbjct: 1  MVKSSTKLALLLLMFFIISET-FVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLHKAFSEYLRDEKTTLL 83
           EKKFLH AF E+LR+EKTT L
Sbjct: 61 LEKKFLHNAFPEHLREEKTTSL 81

[Close]

BLAST of MELO3C034605.2 vs. TrEMBL
Match: tr|A0A0A0LMG3|A0A0A0LMG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.1e-29
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 1  MVKTSTKFALLFLMFFVISETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCQPNG 60
          MVK  TKFAL FLM F+ISE LFVSDARNVVNIPC+SRIDCSDPWDCDCKLNLCFC P+G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLHKAFSEYLRDEK 79
           EKKFLHKAF E LR+++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

[Close]

BLAST of MELO3C034605.2 vs. TrEMBL
Match: tr|A0A2N9FRQ0|A0A2N9FRQ0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.1e-06
Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 1  MVKTSTKFALLFLMFFVISETLFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCQPNG 60
          M K+S K AL+ ++  + S   F  DARNVV IPC++  DC D   CDC  N C C   G
Sbjct: 1  MEKSSLKLALIVVLLLIASSFQFRVDARNVVVIPCETYNDCRDSAKCDCVHNHCRCP--G 60

Query: 61 SEKKFLHKAFSEYLRDEKTTL 82
           E+ F  KA + +L+ +  +L
Sbjct: 61 EEQDFFTKAITNHLKHDLFSL 79

The following BLAST results are available for this feature:

BLAST of MELO3C034605.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61993.1	2.5e-30	81.71	hypothetical protein Csa_2G285280 [Cucumis sativus]	[more]
KGN61957.1	4.6e-29	80.77	hypothetical protein Csa_2G276990 [Cucumis sativus]	[more]

BLAST of MELO3C034605.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C034605.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C034605.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJR0\|A0A0A0LJR0_CUCSA	1.6e-30	81.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1	[more]
tr\|A0A0A0LMG3\|A0A0A0LMG3_CUCSA	3.1e-29	80.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1	[more]
tr\|A0A2N9FRQ0\|A0A2N9FRQ0_FAGSY	8.1e-06	40.74	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034605.2.1	MELO3C034605.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C034605.2	Watermelon (97103) v2	medwmbB082
MELO3C034605.2	Watermelon (97103) v2	medwmbB105
MELO3C034605.2	Wax gourd	medwgoB133
MELO3C034605.2	Cucumber (Gy14) v2	cgybmedB074
MELO3C034605.2	Cucumber (Gy14) v2	cgybmedB449
MELO3C034605.2	Cucumber (Gy14) v1	cgymedB148
MELO3C034605.2	Cucumber (Gy14) v1	cgymedB608
MELO3C034605.2	Cucurbita maxima (Rimu)	cmamedB580
MELO3C034605.2	Cucurbita maxima (Rimu)	cmamedB628
MELO3C034605.2	Cucurbita moschata (Rifu)	cmomedB568
MELO3C034605.2	Cucurbita moschata (Rifu)	cmomedB617
MELO3C034605.2	Cucurbita pepo (Zucchini)	cpemedB253
MELO3C034605.2	Cucurbita pepo (Zucchini)	cpemedB293
MELO3C034605.2	Wild cucumber (PI 183967)	cpimedB081
MELO3C034605.2	Cucurbita pepo (Zucchini)	cpemedB786
MELO3C034605.2	Wild cucumber (PI 183967)	cpimedB263
MELO3C034605.2	Wild cucumber (PI 183967)	cpimedB503
MELO3C034605.2	Cucumber (Chinese Long) v2	cumedB081
MELO3C034605.2	Cucumber (Chinese Long) v2	cumedB263
MELO3C034605.2	Cucumber (Chinese Long) v2	cumedB493
MELO3C034605.2	Melon (DHL92) v3.6.1	medmedB041
MELO3C034605.2	Bottle gourd (USVL1VR-Ls)	lsimedB047
MELO3C034605.2	Bottle gourd (USVL1VR-Ls)	lsimedB090
MELO3C034605.2	Bottle gourd (USVL1VR-Ls)	lsimedB448
MELO3C034605.2	Watermelon (Charleston Gray)	medwcgB106
MELO3C034605.2	Watermelon (Charleston Gray)	medwcgB080
MELO3C034605.2	Watermelon (97103) v1	medwmB124
MELO3C034605.2	Watermelon (97103) v1	medwmB130
MELO3C034605.2	Silver-seed gourd	carmedB0111
MELO3C034605.2	Silver-seed gourd	carmedB0314
MELO3C034605.2	Silver-seed gourd	carmedB0329
MELO3C034605.2	Cucumber (Chinese Long) v3	cucmedB089
MELO3C034605.2	Cucumber (Chinese Long) v3	cucmedB518