MELO3C034323.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C034323.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionProline transporter 1
Locationchr10 : 8867643 .. 8868005 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTAATTTCAGGCTTCTTCCCTTCCACTTTAGGCACTGCCACCGTGAGAACTCCATTTTCCATGCTGGCTTTCACCTCATCTACTTTGGCATTCTCAGGCAGCTTGAATCTCCTCATGAACTGCCCGCTGCTTCGTTCAATTCCTATGCTATTTGTCGTTTTCTCTTGTTGTTCTTTACTTCTCTATCCACTGATCTGCAGAACTCTACCTTCTTCAACCTTAACTTTGACTTCTTGTTTGTTGATTCCAGGAAGTTCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAATCGATGCTGAGTGTTGACAAAAGCAGAGGTTTCACGAGCAGAGGAAGGAACGTTAGCCAGTGA

mRNA sequence

ATGGATTTAATTTCAGGCTTCTTCCCTTCCACTTTAGGCACTGCCACCGTGAGAACTCCATTTTCCATGCTGGCTTTCACCTCATCTACTTTGGCATTCTCAGGCAGCTTGAATCTCCTCATGAACTGCCCGCTGCTTCGTTCAATTCCTATGCTATTTGTCGTTTTCTCTTGTTGTTCTTTACTTCTCTATCCACTGATCTGCAGAACTCTACCTTCTTCAACCTTAACTTTGACTTCTTGTTTGTTGATTCCAGGAAGTTCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAATCGATGCTGAGTGTTGACAAAAGCAGAGGTTTCACGAGCAGAGGAAGGAACGTTAGCCAGTGA

Coding sequence (CDS)

ATGGATTTAATTTCAGGCTTCTTCCCTTCCACTTTAGGCACTGCCACCGTGAGAACTCCATTTTCCATGCTGGCTTTCACCTCATCTACTTTGGCATTCTCAGGCAGCTTGAATCTCCTCATGAACTGCCCGCTGCTTCGTTCAATTCCTATGCTATTTGTCGTTTTCTCTTGTTGTTCTTTACTTCTCTATCCACTGATCTGCAGAACTCTACCTTCTTCAACCTTAACTTTGACTTCTTGTTTGTTGATTCCAGGAAGTTCGGCTGTGAAGATGTGGGCTTGTGGGGTCTCCTTCCAATCGATGCTGAGTGTTGACAAAAGCAGAGGTTTCACGAGCAGAGGAAGGAACGTTAGCCAGTGA

Protein sequence

MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCSLLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKSRGFTSRGRNVSQ
Homology
[Close]
BLAST of MELO3C034323.2 vs. NCBI nr
Match: KGN50621.1 (hypothetical protein Csa_5G197120 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 8.4e-32
Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDLISGFF S LGT TVRTPFSMLAFTSSTLAFSGSLNLLMN P LRSI      FS CS
Sbjct: 3   MDLISGFFSSILGTITVRTPFSMLAFTSSTLAFSGSLNLLMNFPQLRSILCHLSFFSSCS 62

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LLL PLIC+TLPSST TLTS  LIPG SA+KMWACGVSFQSM  + K+
Sbjct: 63  LLLSPLICKTLPSSTSTLTSSFLIPGRSALKMWACGVSFQSMRVLAKA 110

[Close]
BLAST of MELO3C034323.2 vs. NCBI nr
Match: BAS70261.1 (Os01g0136050, partial [Oryza sativa Japonica Group])

HSP 1 Score: 101.3 bits (251), Expect = 2.4e-18
Identity = 66/108 (61.11%), Postives = 70/108 (64.81%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           M   SGF  S LGT TV TPFSMLAFT STLAFSGSLN  MNCPLLRS        S  S
Sbjct: 22  MAFTSGFLTSALGTVTVSTPFSMLAFTWSTLAFSGSLNRRMNCPLLRSTRCHLSFLSSFS 81

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LL  PLI  TLPSST T TS  L PG SA+K    GVSFQS  ++ K+
Sbjct: 82  LLRCPLITSTLPSSTSTFTSSFLTPGRSALKTCDSGVSFQSTRALAKA 129

[Close]
BLAST of MELO3C034323.2 vs. NCBI nr
Match: BAF11577.1 (Os03g0267100 [Oryza sativa Japonica Group] >BAS83423.1 Os03g0267100 [Oryza sativa Japonica Group])

HSP 1 Score: 96.7 bits (239), Expect = 5.8e-17
Identity = 63/108 (58.33%), Postives = 68/108 (62.96%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM A   S L FSG  NL  N PLLRS       FS CS
Sbjct: 1   MDLTSGFLGSSLGTVTVSTPFSMDALICSGLVFSGRRNLRRNLPLLRSTRCHLSDFSSCS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LL  PLICR LPSST TLTS    PG+SA+     GVSFQSM +  K+
Sbjct: 61  LLRSPLICRMLPSSTSTLTSSFFSPGTSALNTCTSGVSFQSMRAPAKA 108

[Close]
BLAST of MELO3C034323.2 vs. NCBI nr
Match: ERM95761.1 (hypothetical protein AMTR_s00023p00249070 [Amborella trichopoda])

HSP 1 Score: 90.1 bits (222), Expect = 5.5e-15
Identity = 62/107 (57.94%), Postives = 64/107 (59.81%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  STLG  T+RTPFSM AFT STLAFS SLNLL N P L S   L   FS  S
Sbjct: 1   MDLTSGFTASTLGIVTMRTPFSMAAFTPSTLAFSWSLNLLRNLPWLLSTLSL---FSSIS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDK 108
               PLI R  PS   T TS  L PG SA   WA  VSFQS L+  K
Sbjct: 61  FFRSPLIYRIFPSFNSTFTSSFLSPGRSASNTWALSVSFQSNLTFKK 104

[Close]
BLAST of MELO3C034323.2 vs. NCBI nr
Match: KVI11914.1 (hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 89.7 bits (221), Expect = 7.1e-15
Identity = 57/97 (58.76%), Postives = 64/97 (65.98%), Query Frame = 0 

Query: 5   SGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCSLLLY 64
           +GFF S+ GT  V TPFS+ AFT S  AFSG+LNLL+N PLLRS        S  S  L 
Sbjct: 153 TGFFTSSFGTVIVSTPFSIEAFTCSNFAFSGNLNLLVNFPLLRSTLCHVSFLSSFSTFLS 212

Query: 65  PLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQS 102
           PLIC+ L SST T TS  LIPG SA+K  A GVSFQS
Sbjct: 213 PLICKILSSSTSTFTSSFLIPGRSALKTCASGVSFQS 249

[Close]
BLAST of MELO3C034323.2 vs. TrEMBL
Match: tr|A0A0A0KSC0|A0A0A0KSC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G197120 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-32
Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDLISGFF S LGT TVRTPFSMLAFTSSTLAFSGSLNLLMN P LRSI      FS CS
Sbjct: 3   MDLISGFFSSILGTITVRTPFSMLAFTSSTLAFSGSLNLLMNFPQLRSILCHLSFFSSCS 62

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LLL PLIC+TLPSST TLTS  LIPG SA+KMWACGVSFQSM  + K+
Sbjct: 63  LLLSPLICKTLPSSTSTLTSSFLIPGRSALKMWACGVSFQSMRVLAKA 110

[Close]
BLAST of MELO3C034323.2 vs. TrEMBL
Match: tr|T1MGU4|T1MGU4_TRIUA (Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 66/108 (61.11%), Postives = 71/108 (65.74%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM AFT S LAFSGS NL  N PLLRS      VFS CS
Sbjct: 1   MDLTSGFLASSLGTVTVSTPFSMDAFTCSALAFSGSRNLRRNLPLLRSTRCQVSVFSSCS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           L   PLI R LPSST T TS    PG+SA+   A GVSFQSM +  K+
Sbjct: 61  LFRSPLIWRMLPSSTSTFTSSFFSPGTSALNTCASGVSFQSMRAPAKA 108

[Close]
BLAST of MELO3C034323.2 vs. TrEMBL
Match: tr|A0A0D9Z549|A0A0D9Z549_9ORYZ (Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 66/108 (61.11%), Postives = 71/108 (65.74%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM A   S L FSGS NL  N PLLRS      VFS CS
Sbjct: 1   MDLTSGFLGSSLGTVTVSTPFSMDALICSGLVFSGSRNLRRNLPLLRSTRCHLSVFSSCS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LL  PLICR LPSST TLTS    PG+SA+   A GVSFQSM +  K+
Sbjct: 61  LLRSPLICRMLPSSTSTLTSSFFSPGTSALNTCASGVSFQSMRAPAKA 108

[Close]
BLAST of MELO3C034323.2 vs. TrEMBL
Match: tr|I1P9U5|I1P9U5_ORYGL (Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 66/108 (61.11%), Postives = 71/108 (65.74%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM A   S L FSGS NL  N PLLRS      VFS CS
Sbjct: 611 MDLTSGFLGSSLGTVTVSTPFSMDALICSGLVFSGSRNLRRNLPLLRSTRCHLSVFSSCS 670

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           LL  PLICR LPSST TLTS    PG+SA+   A GVSFQSM +  K+
Sbjct: 671 LLRSPLICRMLPSSTSTLTSSFFSPGTSALNTCASGVSFQSMRAPAKA 718

[Close]
BLAST of MELO3C034323.2 vs. TrEMBL
Match: tr|A0A1D6RVH9|A0A1D6RVH9_WHEAT (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 66/108 (61.11%), Postives = 71/108 (65.74%), Query Frame = 0 

Query: 1   MDLISGFFPSTLGTATVRTPFSMLAFTSSTLAFSGSLNLLMNCPLLRSIPMLFVVFSCCS 60
           MDL SGF  S+LGT TV TPFSM AFT S LAFSGS NL  N PLLRS      VFS CS
Sbjct: 1   MDLTSGFLASSLGTVTVSTPFSMDAFTCSALAFSGSRNLRRNLPLLRSTRCQVSVFSSCS 60

Query: 61  LLLYPLICRTLPSSTLTLTSCLLIPGSSAVKMWACGVSFQSMLSVDKS 109
           L   PLI R LPSST T TS    PG+SA+   A GVSFQSM +  K+
Sbjct: 61  LFRSPLIWRMLPSSTSTFTSSFFSPGTSALNTCASGVSFQSMRAPAKA 108

The following BLAST results are available for this feature:
BLAST of MELO3C034323.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50621.18.4e-3277.78hypothetical protein Csa_5G197120 [Cucumis sativus][more]
BAS70261.12.4e-1861.11Os01g0136050, partial [Oryza sativa Japonica Group][more]
BAF11577.15.8e-1758.33Os03g0267100 [Oryza sativa Japonica Group] >BAS83423.1 Os03g0267100 [Oryza sativ... [more]
ERM95761.15.5e-1557.94hypothetical protein AMTR_s00023p00249070 [Amborella trichopoda][more]
KVI11914.17.1e-1558.76hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus][more]
BLAST of MELO3C034323.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C034323.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C034323.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KSC0|A0A0A0KSC0_CUCSA5.5e-3277.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G197120 PE=4 SV=1[more]
tr|T1MGU4|T1MGU4_TRIUA5.4e-1961.11Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1[more]
tr|A0A0D9Z549|A0A0D9Z549_9ORYZ5.4e-1961.11Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=3 SV=1[more]
tr|I1P9U5|I1P9U5_ORYGL5.4e-1961.11Uncharacterized protein OS=Oryza glaberrima OX=4538 PE=3 SV=1[more]
tr|A0A1D6RVH9|A0A1D6RVH9_WHEAT5.4e-1961.11Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034323.2.1MELO3C034323.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C034323.2Csa5G197120Cucumber (Chinese Long) v2cumedB350
MELO3C034323.2Lsi04G009480Bottle gourd (USVL1VR-Ls)lsimedB297
MELO3C034323.2Bhi07G000561Wax gourdmedwgoB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C034323.2Cucumber (Gy14) v2cgybmedB312
MELO3C034323.2Cucumber (Gy14) v1cgymedB285
MELO3C034323.2Cucurbita maxima (Rimu)cmamedB738
MELO3C034323.2Cucurbita maxima (Rimu)cmamedB741
MELO3C034323.2Cucurbita moschata (Rifu)cmomedB733
MELO3C034323.2Cucurbita moschata (Rifu)cmomedB736
MELO3C034323.2Cucurbita pepo (Zucchini)cpemedB436
MELO3C034323.2Cucurbita pepo (Zucchini)cpemedB440
MELO3C034323.2Wild cucumber (PI 183967)cpimedB352
MELO3C034323.2Watermelon (Charleston Gray)medwcgB064
MELO3C034323.2Watermelon (97103) v1medwmB054
MELO3C034323.2Silver-seed gourdcarmedB0091
MELO3C034323.2Cucumber (Chinese Long) v3cucmedB370
MELO3C034323.2Cucumber (Chinese Long) v3cucmedB362
MELO3C034323.2Watermelon (97103) v2medwmbB061
MELO3C034323.2Wax gourdmedwgoB078
MELO3C034323.2Wax gourdmedwgoB083