MELO3C032094.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032094.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDxs1
Locationchr06 : 19742942 .. 19745645 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAACCAAAGCCTCCAATGGAGCCTTCCTCCACAGTAATCAGAATTTCATGTTCTTTTGCCAGTTGCCTAATAAGTTGAGTGTCAAGAGGTTTGCAAAATCTTGCATCTGCCACTGTTGGGGCAATGCCTCTTGTTTTCAGCAATTCCGAAGCTTCAACACATTGTTGAACTATTGAACCATACCCCAATATAGCAACTCTAGTGCCTTCCATCAGTATTCTCCCTTTGCCAATCTGTTTAACGGAAGTGAAGTCAACAATGTGTTATATTTTACTTTGAGATAGTTACTTTATAACCTTCTTAATGCTTAGAGTATTTGTTTATTTCATGCTAACCTCAATTGGAGTCCCTTTGAAGTTAGGAGGAACAACAACTCCTATCCCATTGCCCCTTGGAAACCGAAAACAACTTGGTCTATCGTCTATCGCTGCTGCTGTCGCAACCATGTGTATTAGTTCAGCTTCATCAGCTGGAGCCATGACAATCATGTTCGGCAAACAAGCCATGTATGTTATATCAAATGCTCCACAATGTGTCGGGCCATCAGCACCGACCAAACCAGCTCTATCCATTGCAAAGCGGACAGGTAGTTTCTGAAGGTCTACATCGTGCACCACCTTGATTACCATTCCATATAGTTAGTAATTAGGAAAACACAAAATTGTCGATGAAAAATAATCTTTTCAATTACTGGTACCTAAGATCTGTTTGGCTTACATTCCAAGTGCTTAAAAATGTAGGGTCAATATCGTTCCAAATATACATACCTGATCAAACCCTCTTTGAAGGAAGGATGAGTAAATAGCACAAAATGGCTTGATACCCTCTGTTGCTAAACCAGCTGCAAATGTAACAGCATGTTGCTCGGCGATCCCGACGTCGAAGCAACGCTGTGGGAACCTCTTCTGGAAATAGTTAAGACCAGTTCCACCACCCATGGCAGCATGGATGGCTACAATTTTGTCGTCCAGTTCAGCTTCTTTTATCAGAGATTCAGCAAAGTATTGAGTATATGAAAGTGTGGGGGATTTTGTCTTGAATTGCTTGCCTGTTTTGGGATCAAACTTGACTACTCCTGAATTATTACAAGATTTGCAAAGAATTAAGTATTTGAAAGAATCCATGGAAGTAAACAAGATGCTCAATTAGAATAGAGTCTAACCATGCATTTTATCTGCAGCTGCTTCTGCTGGAGGATAGCCCTTCCCTTTTTCTGTAAGAATGTGGATCAATACCGGTCCAGGGGCTGGCATTGATTTGACTTTATCCAAAATGGTGACCAAATCTCCCACATTGTGTCCATCCACTGGTCCAATATAATACAAGCCTAGCTCCTCGAAAAATGTCGATCCCGAACCACTTATCATGCCTCTTGCATATTCATCGACTTTGGCTGCAACTCCATGGGTTTGCTTTCCAATTTGTTTGGTGATGGTCTTAAAGGAATGGTATGAAAGTCATCAACTTTGATAAACCAAGGTTTTATTTTGAATGAATTTTTAAATTTATAATACCGCTTGCCAAGCACTTCTAAAGTCATTTCAAATAGACTCTAACTTGTTGTGCTGACATGAAATATAATATCAATGCAGTGAATGTGTAAGGCGTATGCAATTAATCCTCTAATATCTTACCTTTGCAGCTTCGCGAAGTTTTCGAAACTGTGTACTTGCTTGAAGTTTGGTTAAGGCACTGCTGAGAGCTCCAACAGGAGTAGCAGGGCCATCAAGAGTAGCAGTCGGCAATGAGACTTGCTTGTTGTCATTTAGAATAACGATCATGTTCGTATCGAGATAGCCTGCATTATTCATCGCCTCGTATGCTTGGCCTGCTGTCATAGCTCCATCCCCAATCACAGAAATGACGCTGTTCTTTTTTCCCAAAAGGTCTCTTCCAACTGCCATGCCTACATTGTTTTCATTGTGGATCGGGACAAAGATTCATTAAAAAGAAGAATAATGTGCGTCTCATTAAAATTAAACCCTCTGAAATTGAAAAAGAGTAAATGAGGAGAATATAAGACATACCAAGACCAGCTGATATGCTTGTAGAACTGTGTCCTGCACCAAATGCATCATGAATACTTTCATCCCTTTTTGGAAAGCCAGCAAGCCCTGAAGTTTGCCTTAAAGTATGCATTCTAGACCTTCTTCCAGTGAGAATTTTGTGAGGATATGCCTGTAAAAAACACCACCGAAATGAACTCTAATCCTAAAAATAAATCTCATTATTGTAATACTTTTGTTGGATATGCACCTGATGGCCAACATCCCATATGATTTTGTCGTCTGGAGTGTTGAACACATGATGCAGTGCCACGGCTAGCTCGACAACGCCTAAGCTTGCACTTAAATGACCTCCAGTTTTTGATACAGAGAACACAATTTCTGCTCTAAGCTCTGCTGCTAGCTGCTCAAGATCCTGAAAAAAAGATCTCAAATGATCATAATAAGAAAGAGCAAAAAATGGCACAATGGAAGAAAAGTTGACAATGCTCAACAACAAAAAGAGGTTTACCTGTACTGATAGGTTCTTCATATGAATAGGAAAATTCACAGTGTCCAACAATGGGGTCGCTGGTTTTTCGCCTGAGTAGTCAATCGTCAATCCATCTTTTTCTTTATCTGGCAAATTCTTCCCTTCTCCATTCGTGCTATTACTCGAAGCTCTCAAACAAAACTGTATGAAGAACAAACAATG

mRNA sequence

ATGAGAACCAAAGCCTCCAATGGAGCCTTCCTCCACAGTAATCAGAATTTCATGTTCTTTTGCCAGTTGCCTAATAAGTTGAGTGTCAAGAGAGTATTTGTTTATTTCATGCTAACCTCAATTGGAGTCCCTTTGAAGTTAGGAGGAACAACAACTCCTATCCCATTGCCCCTTGGAAACCGAAAACAACTTGGTCTATCGTCTATCGCTGCTGCTGTCGCAACCATGTGTATTAGTTCAGCTTCATCAGCTGGAGCCATGACAATCATGTTCGGCAAACAAGCCATGTATGTTATATCAAATGCTCCACAATGTGTCGGGCCATCAGCACCGACCAAACCAGCTCTATCCATTGCAAAGCGGACAGGGTCAATATCGTTCCAAATATACATACCTGATCAAACCCTCTTTGAAGGAAGGATGAGTAAATAGCACAAAATGGCTTGATACCCTCTGTTGCTAAACCAGCTGCAAATGTAACAGCATGTTGCTCGGCGATCCCGACGTCGAAGCAACGCTGTGGGAACCTCTTCTGGAAATAGTTAAGACCAGTTCCACCACCCATGGCAGCATGGATGGCTACAATTTTGTCGTCCAGTTCAGCTTCTTTTATCAGAGATTCAGCAAAGTATTGAGTATATGAAAGTGTGGGGGATTTTGTCTTGAATTGCTTGCCTGTTTTGGGATCAAACTTGACTACTCCTGAATTATTACAAGATTTGCAAAGAATTAAGTATTTGAAAGAATCCATGGAAGTAAACAAGATGCTCAATTAGAATAGAGTCTAACCATGCATTTTATCTGCAGCTGCTTCTGCTGGAGGATAGCCCTTCCCTTTTTCTGTAAGAATGTGGATCAATACCGGTCCAGGGGCTGGCATTGATTTGACTTTATCCAAAATGGTGACCAAATCTCCCACATTGTGTCCATCCACTGGTCCAATATAATACAAGCCTAGCTCCTCGAAAAATGTCGATCCCGAACCACTTATCATGCCTCTTGCATATTCATCGACTTTGGCTGCAACTCCATGGGTTTGCTTTCCAATTTGTTTGGTGATGGTCTTAAAGGAATGCTTCGCGAAGTTTTCGAAACTGTGTACTTGCTTGAAGTTTGGTTAAGGCACTGCTGAGAGCTCCAACAGGAGTAGCAGGGCCATCAAGAGTAGCAGTCGGCAATGAGACTTGCTTGTTGTCATTTAGAATAACGATCATGTTCGTATCGAGATAGCCTGCATTATTCATCGCCTCGTATGCTTGGCCTGCTGTCATAGCTCCATCCCCAATCACAGAAATGACGCTGTTCTTTTTTCCCAAAAGGTCTCTTCCAACTGCCATGCCTACATTGTTTTCATTGTGGATCGGGACAAAGATTCATTAAAAAGAAGAATAATGTGCGTCTCATTAAAATTAAACCCTCTGAAATTGAAAAAGAGTAAATGAGGAGAATATAAGACATACCAAGACCAGCTGATATGCTTGTAGAACTGTGTCCTGCACCAAATGCATCATGAATACTTTCATCCCTTTTTGGAAAGCCAGCAAGCCCTGAAGTTTGCCTTAAAGTATGCATTCTAGACCTTCTTCCAGTGAGAATTTTGTGAGGATATGCCTGTAAAAAACACCACCGAAATGAACTCTAATCCTAAAAATAAATCTCATTATTGTAATACTTTTGTTGGATATGCACCTGATGGCCAACATCCCATATGATTTTGTCGTCTGGAGTGTTGAACACATGATGCAGTGCCACGGCTAGCTCGACAACGCCTAAGCTTGCACTTAAATGACCTCCAGTTTTTGATACAGAGAACACAATTTCTGCTCTAAGCTCTGCTGCTAGCTGCTCAAGATCCTGAAAAAAAGATCTCAAATGATCATAATAAGAAAGAGCAAAAAATGGCACAATGGAAGAAAAGTTGACAATGCTCAACAACAAAAAGAGGTTTACCTGTACTGATAGGTTCTTCATATGAATAGGAAAATTCACAGTGTCCAACAATGGGGTCGCTGGTTTTTCGCCTGAGTAGTCAATCGTCAATCCATCTTTTTCTTTATCTGGCAAATTCTTCCCTTCTCCATTCGTGCTATTACTCGAAGCTCTCAAACAAAACTGTATGAAGAACAAACAATG

Coding sequence (CDS)

ATGAGAACCAAAGCCTCCAATGGAGCCTTCCTCCACAGTAATCAGAATTTCATGTTCTTTTGCCAGTTGCCTAATAAGTTGAGTGTCAAGAGAGTATTTGTTTATTTCATGCTAACCTCAATTGGAGTCCCTTTGAAGTTAGGAGGAACAACAACTCCTATCCCATTGCCCCTTGGAAACCGAAAACAACTTGGTCTATCGTCTATCGCTGCTGCTGTCGCAACCATGTGTATTAGTTCAGCTTCATCAGCTGGAGCCATGACAATCATGTTCGGCAAACAAGCCATGTATGTTATATCAAATGCTCCACAATGTGTCGGGCCATCAGCACCGACCAAACCAGCTCTATCCATTGCAAAGCGGACAGGGTCAATATCGTTCCAAATATACATACCTGATCAAACCCTCTTTGAAGGAAGGATGAGTAAATAG

Protein sequence

MRTKASNGAFLHSNQNFMFFCQLPNKLSVKRVFVYFMLTSIGVPLKLGGTTTPIPLPLGNRKQLGLSSIAAAVATMCISSASSAGAMTIMFGKQAMYVISNAPQCVGPSAPTKPALSIAKRTGSISFQIYIPDQTLFEGRMSK
Homology
[Close]
BLAST of MELO3C032094.2 vs. NCBI nr
Match: KMT09296.1 (hypothetical protein BVRB_6g133950 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 70.5 bits (171), Expect = 5.3e-09
Identity = 41/60 (68.33%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 37 MLTSIGVPLKLGGTTTPIPLPLGNRKQLGLSSIAAAVATMCISSASSAGAMTIMFGKQAM 96
          ML +        G  TPIP PLG  KQLGLSSIA AVATMCISSASS GAMT +FGKQAM
Sbjct: 1  MLLAYSSAFAARGRGTPIPFPLGYLKQLGLSSIATAVATMCISSASSDGAMTTIFGKQAM 60

[Close]
BLAST of MELO3C032094.2 vs. TrEMBL
Match: tr|A0A0A9N9X4|A0A0A9N9X4_ARUDO (Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 42/56 (75.00%), Postives = 45/56 (80.36%), Query Frame = 0 

Query: 69  IAAAVATMCISSASSAGAMTIMFGKQAMYVISNAPQCVGPSAPTKPALSIAKRTGS 125
           +AAAVATM  SSASS GAMT M G+ AMYV SNAPQ VGPSAPT PALS+A  TGS
Sbjct: 1   MAAAVATMWQSSASSDGAMTTMLGRHAMYVTSNAPQWVGPSAPTSPALSMANLTGS 56

[Close]
BLAST of MELO3C032094.2 vs. TrEMBL
Match: tr|A0A0A9NGY5|A0A0A9NGY5_ARUDO (Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 42/56 (75.00%), Postives = 45/56 (80.36%), Query Frame = 0 

Query: 69  IAAAVATMCISSASSAGAMTIMFGKQAMYVISNAPQCVGPSAPTKPALSIAKRTGS 125
           +AAAVATM  SSASS GAMT M G+ AMYV SNAPQ VGPSAPT PALS+A  TGS
Sbjct: 1   MAAAVATMWQSSASSDGAMTTMLGRHAMYVTSNAPQWVGPSAPTSPALSMANLTGS 56

[Close]
BLAST of MELO3C032094.2 vs. TrEMBL
Match: tr|A0A0A9K7D2|A0A0A9K7D2_ARUDO (Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-06
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 87  MTIMFGKQAMYVISNAPQCVGPSAPTKPALSIAKRTGS 125
           MT M G+ AMYV SNAPQCVGPSAPT PALS+A  TGS
Sbjct: 1   MTTMLGRHAMYVTSNAPQCVGPSAPTSPALSMANLTGS 38

[Close]
BLAST of MELO3C032094.2 vs. TrEMBL
Match: tr|A0A0A9J338|A0A0A9J338_ARUDO (Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.0e-05
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 87  MTIMFGKQAMYVISNAPQCVGPSAPTKPALSIAKRTGS 125
           MT M G+ AMYV SNAPQ VGPSAPT PALS+A  TGS
Sbjct: 1   MTTMLGRHAMYVTSNAPQWVGPSAPTSPALSMANLTGS 38

The following BLAST results are available for this feature:
BLAST of MELO3C032094.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KMT09296.15.3e-0968.33hypothetical protein BVRB_6g133950 [Beta vulgaris subsp. vulgaris][more]
BLAST of MELO3C032094.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C032094.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C032094.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A9N9X4|A0A0A9N9X4_ARUDO2.4e-1075.00Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1[more]
tr|A0A0A9NGY5|A0A0A9NGY5_ARUDO2.4e-1075.00Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1[more]
tr|A0A0A9K7D2|A0A0A9K7D2_ARUDO2.1e-0676.32Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1[more]
tr|A0A0A9J338|A0A0A9J338_ARUDO4.0e-0573.68Dxs1 OS=Arundo donax OX=35708 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032094.2.1MELO3C032094.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032094.2Cucumber (Gy14) v2cgybmedB209
MELO3C032094.2Cucumber (Gy14) v1cgymedB004
MELO3C032094.2Cucumber (Gy14) v1cgymedB434
MELO3C032094.2Cucurbita maxima (Rimu)cmamedB349
MELO3C032094.2Cucurbita maxima (Rimu)cmamedB781
MELO3C032094.2Cucurbita moschata (Rifu)cmomedB335
MELO3C032094.2Cucurbita moschata (Rifu)cmomedB778
MELO3C032094.2Cucurbita pepo (Zucchini)cpemedB237
MELO3C032094.2Cucurbita pepo (Zucchini)cpemedB485
MELO3C032094.2Wild cucumber (PI 183967)cpimedB229
MELO3C032094.2Wild cucumber (PI 183967)cpimedB232
MELO3C032094.2Cucumber (Chinese Long) v2cumedB231
MELO3C032094.2Bottle gourd (USVL1VR-Ls)lsimedB390
MELO3C032094.2Watermelon (Charleston Gray)medwcgB405
MELO3C032094.2Watermelon (97103) v1medwmB441
MELO3C032094.2Silver-seed gourdcarmedB0929
MELO3C032094.2Silver-seed gourdcarmedB1002
MELO3C032094.2Cucumber (Chinese Long) v3cucmedB239
MELO3C032094.2Watermelon (97103) v2medwmbB418
MELO3C032094.2Wax gourdmedwgoB511