MELO3C031993.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031993.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr06 : 12741027 .. 12742228 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCATTTCTAGCATGGCAAGTTCATCGAGACTACCTAAGCACAATTGGACTAAAGAGGAAGAGATAGGCCTCATCGAGTGCCTCGTAGAGTTAGTCAATGCTGGTGGGTGGAGGTCCGACAACGGGACGTGTCGACTCGGATACCAAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCCAAATTCTAAGGTCCATGTTTCAACGATCGATAACCAAATAAAATTGTTGAAGAGAATGTTCCATGCAATTGTGGAGATGTATGGCCCAACTTGCAATGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAGAGAAAGAAGTCTTCGACGATTGGGTCAAGGTGCGTTACTAGTCATTTGTGTGATTATTGTAGTATATTTCAAAAAATGGACTAAAAATGTATTATTGCACTTATACAGAGTCATCTGGCGGCTAAGGGCCTCTTTAATAAGTCGTTTCTCCACTATGACGAACTGTCGTACGTGTTTAGCAAAGATCGTGCAACGGGAGGCCGGACTGAGAGTTTTGCAGACGTTGGGTCAAACGATCCTACTGGGTATGAGACATTTGCCACTGTCGCTGCGTCGGATACGGACTTCCAACCTATGTACAATCAAAGATTGAACATGTCGCCTGGTGAATTGATGGGAACAAAAACCGCTCGGGTAAGTGAAGGTAGGTATGTTTCAAGCGGGTCTAAACAGAAACGTGGAGGACAAGACACAGACAGTGGGGACGTACTTTGCACTGCGGTTGAGTATGGAAATGTACAATTGAACCGCATTGCTGAATGACTTGTCCTACAACGTCAAGACGCAAGCCAAGCACATCAAGAGGTTGTCCAACAGTTGGAGGCCATCCATGAGCTGACATTAATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATCACATGAAAGCTTTCCTTGAGGTTCCCGACAATATATAGTATCCGTACTGCAACATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTACTGGCTTTTTTTACTTGGACTATATGTTCTTCTTCTTACTTGTTTTGTCTTACTATCTAACGAACTTCTCTTTATGTTCAAGCTTTATGGTTTGTATTTTCATTTCGCTTTCCAATGTAATGATTTGATATTGTTTCATTATCGTATTAATGTACTATTTTCGTTCAA

mRNA sequence

GTTTCATTTCTAGCATGGCAAGTTCATCGAGACTACCTAAGCACAATTGGACTAAAGAGGAAGAGATAGGCCTCATCGAGTGCCTCGTAGAGTTAGTCAATGCTGGTGGGTGGAGGTCCGACAACGGGACGTGTCGACTCGGATACCAAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCCAAATTCTAAGGTCCATGTTTCAACGATCGATAACCAAATAAAATTGTTGAAGAGAATGTTCCATGCAATTGTGGAGATGTATGGCCCAACTTGCAATGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAGAGAAAGAAGTCTTCGACGATTGGGTCAAGAGTCATCTGGCGGCTAAGGGCCTCTTTAATAAGTCGTTTCTCCACTATGACGAACTGTCGTACGTGTTTAGCAAAGATCGTGCAACGGGAGGCCGGACTGAGAGTTTTGCAGACGTTGGGTCAAACGATCCTACTGGGTATGAGACATTTGCCACTGTCGCTGCGTCGGATACGGACTTCCAACCTATGTACAATCAAAGATTGAACATGTCGCCTGGTGAATTGATGGGAACAAAAACCGCTCGGGTAAGTGAAGGTAGGTATGTTTCAAGCGGGTCTAAACAGAAACGTGGAGGACAAGACACAGACAGTGGGGACGTACTTTGCACTGCGGTTGAGTATGGAAATGTACAATTGAACCGCATTGCTGAATGACTTGTCCTACAACGTCAAGACGCAAGCCAAGCACATCAAGAGGTTGTCCAACAGTTGGAGGCCATCCATGAGCTGACATTAATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATCACATGAAAGCTTTCCTTGAGGTTCCCGACAATATATAGTATCCGTACTGCAACATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTACTGGCTTTTTTTACTTGGACTATATGTTCTTCTTCTTACTTGTTTTGTCTTACTATCTAACGAACTTCTCTTTATGTTCAAGCTTTATGGTTTGTATTTTCATTTCGCTTTCCAATGTAATGATTTGATATTGTTTCATTATCGTATTAATGTACTATTTTCGTTCAA

Coding sequence (CDS)

ATGGCAAGTTCATCGAGACTACCTAAGCACAATTGGACTAAAGAGGAAGAGATAGGCCTCATCGAGTGCCTCGTAGAGTTAGTCAATGCTGGTGGGTGGAGGTCCGACAACGGGACGTGTCGACTCGGATACCAAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCCAAATTCTAAGGTCCATGTTTCAACGATCGATAACCAAATAAAATTGTTGAAGAGAATGTTCCATGCAATTGTGGAGATGTATGGCCCAACTTGCAATGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAGAGAAAGAAGTCTTCGACGATTGGGTCAAGAGTCATCTGGCGGCTAAGGGCCTCTTTAATAAGTCGTTTCTCCACTATGACGAACTGTCGTACGTGTTTAGCAAAGATCGTGCAACGGGAGGCCGGACTGAGAGTTTTGCAGACGTTGGGTCAAACGATCCTACTGGGTATGAGACATTTGCCACTGTCGCTGCGTCGGATACGGACTTCCAACCTATGTACAATCAAAGATTGAACATGTCGCCTGGTGAATTGATGGGAACAAAAACCGCTCGGGTAAGTGAAGGTAGGTATGTTTCAAGCGGGTCTAAACAGAAACGTGGAGGACAAGACACAGACAGTGGGGACGTACTTTGCACTGCGGTTGAGTATGGAAATGTACAATTGAACCGCATTGCTGAATGA

Protein sequence

MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSKVHVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGLFNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGYETFATVAASDTDFQPMYNQRLNMSPGELMGTKTARVSEGRYVSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE

Homology

[Close]

BLAST of MELO3C031993.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 372.9 bits (956), Expect = 8.3e-100
Identity = 180/236 (76.27%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           M SSSRLPKH WTKEEE GL+ECLVELVNAGGWRSDNGT R GY NQLARMMAFKIP S 
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  VHVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGL 120
           +H STID++IKL+KRMFHA+ EM GP C+GFGWNDE+KCIVAEKEVFDDW  SH AAKGL
Sbjct: 416 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGL 475

Query: 121 FNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGYETFATVAASDTDFQPMYNQRL 180
            NKSF+HYDELSYVF KDRATGGR ESFAD+GSNDP GY+  A  A  DTDF PMY+  L
Sbjct: 476 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGL 535

Query: 181 NMSPGELMGTKTARVSEGRYVSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
           NMSP +LM T+TARVSE R VSSGSK+KR G  TDSGD++ TA+EYGN QL+RIAE
Sbjct: 536 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAE 589

[Close]

BLAST of MELO3C031993.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 3.5e-90
Identity = 168/236 (71.19%), Postives = 187/236 (79.24%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           M SSSRLPKH WTKEEE      LVELVNAGGWRSDNGT   GY NQLARMMAFKIP   
Sbjct: 1   MTSSSRLPKHTWTKEEEAS----LVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCN 60

Query: 61  VHVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGL 120
           +H STID++IKLLKRMFHA+ EM GP C+GFGWNDE+KCIVAEKE       SH AAKGL
Sbjct: 61  IHASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE-------SHPAAKGL 120

Query: 121 FNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGYETFATVAASDTDFQPMYNQRL 180
            NKSF+HYDELSYVF KDRATGGR E FAD+GSNDP GY+ F   AA DT+F PMY+ RL
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRL 180

Query: 181 NMSPGELMGTKTARVSEGRYVSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
           NMSP +LM T+TARVSE R VSSGS++K  G  TDSGD++CTA+ YGN QL+RIAE
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAE 225

[Close]

BLAST of MELO3C031993.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 147/192 (76.56%), Postives = 160/192 (83.33%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           M SSSRLPKH WTKEEE G    LVELVN GGWRSDNGT R GY NQLARMMAFKIP S 
Sbjct: 1   MTSSSRLPKHTWTKEEEAG----LVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  VHVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGL 120
           +H STID++IKL+KRMFHA+ EM GP C+GFGWNDE+KCIVAEKEVFDDWVKSH  AKGL
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGL 120

Query: 121 FNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGYETFATVAASDTDFQPMYNQRL 180
            NKSF+HYDELSYVF KDRATGGR ESFAD+GSNDP GY+ FA  A  DTDF PMY+ RL
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRL 180

Query: 181 NMSPGELMGTKT 193
           NMSP +LM T+T
Sbjct: 181 NMSPDDLMETRT 188

[Close]

BLAST of MELO3C031993.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 9.2e-67
Identity = 128/238 (53.78%), Postives = 172/238 (72.27%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           MAS SR PKH WTKEEE   +ECLVELV++GGWRSDNGT + GY  QL RMMA K+P + 
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  V-HVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKG 120
           +   STID  +K LK+ +HAI EM GP+C+GFGWN+E +CI+AE+++FD W+KSH AAKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LFNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGY-ETFATVAASDTDFQPMYNQ 180
           L +KSF +YD+LSYVF KDRATG R+E+F +VGSN    + +T     + D D   MY+Q
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 RLNMSPGELMGTKTARVSEGRYVSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
            ++MSP E+ G +  + SE R  SS SK+KRG +  ++ +V+ + +E+GN QL  IA+
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIAD 238

[Close]

BLAST of MELO3C031993.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 201.1 bits (510), Expect = 4.3e-48
Identity = 105/216 (48.61%), Postives = 142/216 (65.74%), Query Frame = 0


Query: 23  CLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSKVHVST-IDNQIKLLKRMFHAIV 82
           C +ELV+ GGW+SDNGT R GY  QL RMMA K+   +V  +T ID +IK LKR F AI 
Sbjct: 340 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 399

Query: 83  EMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGLFNKSFLHYDELSYVFSKDRAT 142
           EM GP C+GFGWNDE+KCIVAEKE+FD+WV+S  AAKGL N  F +YDEL+YVF +DRAT
Sbjct: 400 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 459

Query: 143 GGRTESFADVGSNDP-TGYETFATVAASDTDFQPMYNQRLNMSPGELMGTKTARVSEGRY 202
           G   E+FADVGSN+P  GY+ F  +   + DF P+Y++ +++   ++  ++ +       
Sbjct: 460 GRFAETFADVGSNEPGGGYDRF-DMGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXX 519

Query: 203 VSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
                 +KRG Q     + +  A++  N QL +IAE
Sbjct: 520 XXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAE 554

[Close]

BLAST of MELO3C031993.2 vs. TAIR10
Match: AT1G30140.1 (unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.7e-11
Identity = 44/151 (29.14%), Postives = 82/151 (54.30%), Query Frame = 0


Query: 8   PKHNWTKEEEIGLIECLVELVNAGGWRSDNGTC-RLGYQNQLARMMAFKIPNSKVHVSTI 67
           P + WT +E     + L+EL+    WR  +G   +L  +++L   +  ++  +K H + +
Sbjct: 13  PYNQWTPDE----TDVLIELIRQ-NWRDSSGIIGKLTVESKLLPALNKRLGCNKNHKNYM 72

Query: 68  DNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGLFNKSFL 127
            +++K LK ++ + +++     +GFGW+ E K   A  EV+ D++K+H   K +  +S  
Sbjct: 73  -SRLKFLKNLYQSYLDL-KRFSSGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESID 132

Query: 128 HYDELSYVFSKDRATGGRTESFADVGSNDPT 158
           H+++L  +F    ATG    SFA VG +D T
Sbjct: 133 HFEDLQIIFGDVVATG----SFA-VGMSDST 151

[Close]

BLAST of MELO3C031993.2 vs. TAIR10
Match: AT4G02210.1 (unknown protein)

HSP 1 Score: 52.4 bits (124), Expect = 4.5e-07
Identity = 36/140 (25.71%), Postives = 66/140 (47.14%), Query Frame = 0


Query: 12  WTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMA-FKIPNSKVHVSTIDNQI 71
           WT E +   IE +VE V  G    D+   +  ++       A FK    K     + N+ 
Sbjct: 14  WTPEMDQYFIELMVEQVRKGNRFEDHLFSKRAWKFMSCSFTAKFKFLYGK---DVLKNRH 73

Query: 72  KLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGLFNKSFLHYDE 131
           K L+ +F ++  +     +GF W+D ++ +VA+  V+D+++K H  ++    KS   Y +
Sbjct: 74  KTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKD 133

Query: 132 LSYVFSKDRATGGRTESFAD 151
           L  V+S   +     ES ++
Sbjct: 134 LCLVYSDGMSEHKAEESISE 148

[Close]

BLAST of MELO3C031993.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 5.5e-100
Identity = 180/236 (76.27%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           M SSSRLPKH WTKEEE GL+ECLVELVNAGGWRSDNGT R GY NQLARMMAFKIP S 
Sbjct: 356 MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 415

Query: 61  VHVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGL 120
           +H STID++IKL+KRMFHA+ EM GP C+GFGWNDE+KCIVAEKEVFDDW  SH AAKGL
Sbjct: 416 IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGL 475

Query: 121 FNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGYETFATVAASDTDFQPMYNQRL 180
            NKSF+HYDELSYVF KDRATGGR ESFAD+GSNDP GY+  A  A  DTDF PMY+  L
Sbjct: 476 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGL 535

Query: 181 NMSPGELMGTKTARVSEGRYVSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
           NMSP +LM T+TARVSE R VSSGSK+KR G  TDSGD++ TA+EYGN QL+RIAE
Sbjct: 536 NMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAE 589

[Close]

BLAST of MELO3C031993.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.3e-90
Identity = 168/236 (71.19%), Postives = 187/236 (79.24%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           M SSSRLPKH WTKEEE      LVELVNAGGWRSDNGT   GY NQLARMMAFKIP   
Sbjct: 1   MTSSSRLPKHTWTKEEEAS----LVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCN 60

Query: 61  VHVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGL 120
           +H STID++IKLLKRMFHA+ EM GP C+GFGWNDE+KCIVAEKE       SH AAKGL
Sbjct: 61  IHASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE-------SHPAAKGL 120

Query: 121 FNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGYETFATVAASDTDFQPMYNQRL 180
            NKSF+HYDELSYVF KDRATGGR E FAD+GSNDP GY+ F   AA DT+F PMY+ RL
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRL 180

Query: 181 NMSPGELMGTKTARVSEGRYVSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
           NMSP +LM T+TARVSE R VSSGS++K  G  TDSGD++CTA+ YGN QL+RIAE
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAE 225

[Close]

BLAST of MELO3C031993.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81
Identity = 147/192 (76.56%), Postives = 160/192 (83.33%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           M SSSRLPKH WTKEEE G    LVELVN GGWRSDNGT R GY NQLARMMAFKIP S 
Sbjct: 1   MTSSSRLPKHTWTKEEEAG----LVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  VHVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGL 120
           +H STID++IKL+KRMFHA+ EM GP C+GFGWNDE+KCIVAEKEVFDDWVKSH  AKGL
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGL 120

Query: 121 FNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGYETFATVAASDTDFQPMYNQRL 180
            NKSF+HYDELSYVF KDRATGGR ESFAD+GSNDP GY+ FA  A  DTDF PMY+ RL
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRL 180

Query: 181 NMSPGELMGTKT 193
           NMSP +LM T+T
Sbjct: 181 NMSPDDLMETRT 188

[Close]

BLAST of MELO3C031993.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.1e-67
Identity = 128/238 (53.78%), Postives = 172/238 (72.27%), Query Frame = 0


Query: 1   MASSSRLPKHNWTKEEEIGLIECLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSK 60
           MAS SR PKH WTKEEE   +ECLVELV++GGWRSDNGT + GY  QL RMMA K+P + 
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  V-HVSTIDNQIKLLKRMFHAIVEMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKG 120
           +   STID  +K LK+ +HAI EM GP+C+GFGWN+E +CI+AE+++FD W+KSH AAKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LFNKSFLHYDELSYVFSKDRATGGRTESFADVGSNDPTGY-ETFATVAASDTDFQPMYNQ 180
           L +KSF +YD+LSYVF KDRATG R+E+F +VGSN    + +T     + D D   MY+Q
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 181 RLNMSPGELMGTKTARVSEGRYVSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
            ++MSP E+ G +  + SE R  SS SK+KRG +  ++ +V+ + +E+GN QL  IA+
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIAD 238

[Close]

BLAST of MELO3C031993.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.9e-48
Identity = 105/216 (48.61%), Postives = 142/216 (65.74%), Query Frame = 0


Query: 23  CLVELVNAGGWRSDNGTCRLGYQNQLARMMAFKIPNSKVHVST-IDNQIKLLKRMFHAIV 82
           C +ELV+ GGW+SDNGT R GY  QL RMMA K+   +V  +T ID +IK LKR F AI 
Sbjct: 340 CGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIA 399

Query: 83  EMYGPTCNGFGWNDEQKCIVAEKEVFDDWVKSHLAAKGLFNKSFLHYDELSYVFSKDRAT 142
           EM GP C+GFGWNDE+KCIVAEKE+FD+WV+S  AAKGL N  F +YDEL+YVF +DRAT
Sbjct: 400 EMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRAT 459

Query: 143 GGRTESFADVGSNDP-TGYETFATVAASDTDFQPMYNQRLNMSPGELMGTKTARVSEGRY 202
           G   E+FADVGSN+P  GY+ F  +   + DF P+Y++ +++   ++  ++ +       
Sbjct: 460 GRFAETFADVGSNEPGGGYDRF-DMGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXX 519

Query: 203 VSSGSKQKRGGQDTDSGDVLCTAVEYGNVQLNRIAE 237
                 +KRG Q     + +  A++  N QL +IAE
Sbjct: 520 XXXXXXRKRGSQRDFDVEAIHLALDQTNEQLRQIAE 554

The following BLAST results are available for this feature:

BLAST of MELO3C031993.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34114.1	8.3e-100	76.27	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008459131.1	3.5e-90	71.19	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]
XP_008466949.1	1.7e-81	76.56	PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]	[more]
XP_008441954.1	9.2e-67	53.78	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
ADN33754.1	4.3e-48	48.61	retrotransposon protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C031993.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30140.1	6.7e-11	29.14	unknown protein	[more]
AT4G02210.1	4.5e-07	25.71	unknown protein	[more]

BLAST of MELO3C031993.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C031993.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCB5\|E5GCB5_CUCME	5.5e-100	76.27	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	2.3e-90	71.19	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]
tr\|A0A1S3CTN6\|A0A1S3CTN6_CUCME	1.1e-81	76.56	uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=...	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	6.1e-67	53.78	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|E5GBB2\|E5GBB2_CUCME	2.9e-48	48.61	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024752	Myb/SANT-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031993.2.1	MELO3C031993.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 11..108 e-value: 1.1E-6 score: 29.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..217
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 9..152
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 9..152

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031993.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C031993.2	Cucumber (Gy14) v2	cgybmedB492
MELO3C031993.2	Cucumber (Gy14) v1	cgymedB379
MELO3C031993.2	Cucumber (Gy14) v1	cgymedB412
MELO3C031993.2	Cucurbita maxima (Rimu)	cmamedB151
MELO3C031993.2	Cucurbita maxima (Rimu)	cmamedB346
MELO3C031993.2	Cucurbita maxima (Rimu)	cmamedB777
MELO3C031993.2	Cucurbita moschata (Rifu)	cmomedB139
MELO3C031993.2	Cucurbita moschata (Rifu)	cmomedB332
MELO3C031993.2	Cucurbita moschata (Rifu)	cmomedB774
MELO3C031993.2	Cucurbita pepo (Zucchini)	cpemedB234
MELO3C031993.2	Cucurbita pepo (Zucchini)	cpemedB481
MELO3C031993.2	Cucurbita pepo (Zucchini)	cpemedB764
MELO3C031993.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C031993.2	Wild cucumber (PI 183967)	cpimedB552
MELO3C031993.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C031993.2	Cucumber (Chinese Long) v2	cumedB534
MELO3C031993.2	Melon (DHL92) v3.6.1	medmedB091
MELO3C031993.2	Bottle gourd (USVL1VR-Ls)	lsimedB280
MELO3C031993.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C031993.2	Watermelon (Charleston Gray)	medwcgB413
MELO3C031993.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C031993.2	Watermelon (97103) v1	medwmB448
MELO3C031993.2	Watermelon (97103) v1	medwmB472
MELO3C031993.2	Silver-seed gourd	carmedB0307
MELO3C031993.2	Silver-seed gourd	carmedB0384
MELO3C031993.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C031993.2	Cucumber (Chinese Long) v3	cucmedB566
MELO3C031993.2	Watermelon (97103) v2	medwmbB421
MELO3C031993.2	Watermelon (97103) v2	medwmbB424
MELO3C031993.2	Wax gourd	medwgoB531
MELO3C031993.2	Wax gourd	medwgoB558