MELO3C031703.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031703.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	pectinesterase inhibitor-like
Location	chr06 : 12384631 .. 12384856 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGATATTCGTCTTGTGCTAAGAGCTATGATGAAGCTGTTGGTGACATAGAAAATGCTCTAAAGGACTTGGCACTTGGTGACTTTAATGGTGTCAATATTGTAACTTCTAGTGCCATGACCGAGATTGATGATTGTCAGGATAAGTTTATGCAACCACCGAAAGGATACGTCGTTGCTTTTGAAGAATAACAAGACTCTAAATGATATATGCAGCATTATTTTG

mRNA sequence

CAACGATATTCGTCTTGTGCTAAGAGCTATGATGAAGCTGTTGGTGACATAGAAAATGCTCTAAAGGACTTGGCACTTGGTGACTTTAATGGTGTCAATATTGTAACTTCTAGTGCCATGACCGAGATTGATGATTGTCAGGATAAGTTTATGCAACCACCGAAAGGATACGTCGTTGCTTTTGAAGAATAACAAGACTCTAAATGATATATGCAGCATTATTTTG

Coding sequence (CDS)

CAACGATATTCGTCTTGTGCTAAGAGCTATGATGAAGCTGTTGGTGACATAGAAAATGCTCTAAAGGACTTGGCACTTGGTGACTTTAATGGTGTCAATATTGTAACTTCTAGTGCCATGACCGAGATTGATGATTGTCAGGATAAGTTTATGCAACCACCGAAAGGATACGTCGTTGCTTTTGAAGAATAA

Protein sequence

QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPKGYVVAFEE

Homology

[Close]

BLAST of MELO3C031703.2 vs. NCBI nr
Match: XP_008444309.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 8.6e-20
Identity = 50/55 (90.91%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCAKSYDEAVGDIEN  KDLALGDFN VNIVTS AMTEIDDCQDKF QPPK
Sbjct: 92  QRYSSCAKSYDEAVGDIENGQKDLALGDFNAVNIVTSGAMTEIDDCQDKFSQPPK 146

[Close]

BLAST of MELO3C031703.2 vs. NCBI nr
Match: XP_008456812.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCA+SYD AVGDIENA KDLA+GDFNGVNIVTS AMTEIDDCQDKF+QPPK
Sbjct: 92  QRYSSCAESYDGAVGDIENAQKDLAIGDFNGVNIVTSGAMTEIDDCQDKFVQPPK 146

[Close]

BLAST of MELO3C031703.2 vs. NCBI nr
Match: XP_008464144.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19
Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSC +SYDEAVGDIEN  KDLALGDFNGVNIVTS AMTEIDDCQDKF QPPK
Sbjct: 98  QRYSSCVESYDEAVGDIENVQKDLALGDFNGVNIVTSGAMTEIDDCQDKFAQPPK 152

[Close]

BLAST of MELO3C031703.2 vs. NCBI nr
Match: XP_008456811.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-19
Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCA+SYDE VGDIENA KDLALGDFN VNIVTS AMTEIDDCQDKF QPPK
Sbjct: 92  QRYSSCAESYDETVGDIENAQKDLALGDFNAVNIVTSGAMTEIDDCQDKFAQPPK 146

[Close]

BLAST of MELO3C031703.2 vs. NCBI nr
Match: XP_008465572.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-19
Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCA+SYDEA+GDIENA KDLALGDFNGVNIVTSSAMT IDDCQDK  QPPK
Sbjct: 90  QRYSSCAESYDEAIGDIENAQKDLALGDFNGVNIVTSSAMTGIDDCQDKLAQPPK 144

[Close]

BLAST of MELO3C031703.2 vs. TAIR10
Match: AT1G48020.1 (pectin methylesterase inhibitor 1)

HSP 1 Score: 43.9 bits (102), Expect = 4.3e-05
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 3   YSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQD 49
           Y SC   Y+ A+G++E A + LA GD  G+N+  S+A+   D C D
Sbjct: 95  YRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLD 140

[Close]

BLAST of MELO3C031703.2 vs. Swiss-Prot
Match: sp|Q9LNF2|PMEI1_ARATH (Pectinesterase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PMEI1 PE=1 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 7.7e-04
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 3   YSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQD 49
           Y SC   Y+ A+G++E A + LA GD  G+N+  S+A+   D C D
Sbjct: 95  YRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLD 140

[Close]

BLAST of MELO3C031703.2 vs. TrEMBL
Match: tr|A0A1S3B9K9|A0A1S3B9K9_CUCME (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103487678 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.7e-20
Identity = 50/55 (90.91%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCAKSYDEAVGDIEN  KDLALGDFN VNIVTS AMTEIDDCQDKF QPPK
Sbjct: 92  QRYSSCAKSYDEAVGDIENGQKDLALGDFNAVNIVTSGAMTEIDDCQDKFSQPPK 146

[Close]

BLAST of MELO3C031703.2 vs. TrEMBL
Match: tr|A0A1S3C441|A0A1S3C441_CUCME (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103496650 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.4e-20
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCA+SYD AVGDIENA KDLA+GDFNGVNIVTS AMTEIDDCQDKF+QPPK
Sbjct: 92  QRYSSCAESYDGAVGDIENAQKDLAIGDFNGVNIVTSGAMTEIDDCQDKFVQPPK 146

[Close]

BLAST of MELO3C031703.2 vs. TrEMBL
Match: tr|A0A1S3CKV4|A0A1S3CKV4_CUCME (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103502096 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.7e-20
Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSC +SYDEAVGDIEN  KDLALGDFNGVNIVTS AMTEIDDCQDKF QPPK
Sbjct: 98  QRYSSCVESYDEAVGDIENVQKDLALGDFNGVNIVTSGAMTEIDDCQDKFAQPPK 152

[Close]

BLAST of MELO3C031703.2 vs. TrEMBL
Match: tr|A0A1S3C476|A0A1S3C476_CUCME (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103496649 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCA+SYDE VGDIENA KDLALGDFN VNIVTS AMTEIDDCQDKF QPPK
Sbjct: 92  QRYSSCAESYDETVGDIENAQKDLALGDFNAVNIVTSGAMTEIDDCQDKFAQPPK 146

[Close]

BLAST of MELO3C031703.2 vs. TrEMBL
Match: tr|A0A1S3CP37|A0A1S3CP37_CUCME (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103503207 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 1   QRYSSCAKSYDEAVGDIENALKDLALGDFNGVNIVTSSAMTEIDDCQDKFMQPPK 56
           QRYSSCA+SYDEA+GDIENA KDLALGDFNGVNIVTSSAMT IDDCQDK  QPPK
Sbjct: 90  QRYSSCAESYDEAIGDIENAQKDLALGDFNGVNIVTSSAMTGIDDCQDKLAQPPK 144

The following BLAST results are available for this feature:

BLAST of MELO3C031703.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444309.1	8.6e-20	90.91	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
XP_008456812.1	1.1e-19	89.09	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
XP_008464144.1	1.5e-19	89.09	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
XP_008456811.1	2.5e-19	89.09	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
XP_008465572.1	2.5e-19	89.09	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]

BLAST of MELO3C031703.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48020.1	4.3e-05	41.30	pectin methylesterase inhibitor 1	[more]

BLAST of MELO3C031703.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LNF2\|PMEI1_ARATH	7.7e-04	41.30	Pectinesterase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PMEI1 PE=1 SV=1	[more]

BLAST of MELO3C031703.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9K9\|A0A1S3B9K9_CUCME	5.7e-20	90.91	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103487678 PE=4 SV=1	[more]
tr\|A0A1S3C441\|A0A1S3C441_CUCME	7.4e-20	89.09	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103496650 PE=4 SV=1	[more]
tr\|A0A1S3CKV4\|A0A1S3CKV4_CUCME	9.7e-20	89.09	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103502096 PE=4 SV=1	[more]
tr\|A0A1S3C476\|A0A1S3C476_CUCME	1.7e-19	89.09	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103496649 PE=4 SV=1	[more]
tr\|A0A1S3CP37\|A0A1S3CP37_CUCME	1.7e-19	89.09	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103503207 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004857	enzyme inhibitor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR035513	Invertase/methylesterase_inhib
IPR006501	Pectinesterase_inhib_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0046910	pectinesterase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031703.2.1	MELO3C031703.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	TIGRFAM	TIGR01614	TIGR01614	coord: 1..54 e-value: 9.4E-12 score: 42.6
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 3..52 e-value: 1.0E-7 score: 32.3
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	GENE3D	G3DSA:1.20.140.40		coord: 1..60 e-value: 7.1E-15 score: 57.1
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	SUPERFAMILY	SSF101148	Plant invertase/pectin methylesterase inhibitor	coord: 2..53

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031703.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C031703.2	Cucumber (Gy14) v2	cgybmedB492
MELO3C031703.2	Cucumber (Gy14) v1	cgymedB379
MELO3C031703.2	Cucumber (Gy14) v1	cgymedB412
MELO3C031703.2	Cucurbita maxima (Rimu)	cmamedB346
MELO3C031703.2	Cucurbita maxima (Rimu)	cmamedB560
MELO3C031703.2	Cucurbita maxima (Rimu)	cmamedB777
MELO3C031703.2	Cucurbita moschata (Rifu)	cmomedB332
MELO3C031703.2	Cucurbita moschata (Rifu)	cmomedB547
MELO3C031703.2	Cucurbita moschata (Rifu)	cmomedB774
MELO3C031703.2	Cucurbita pepo (Zucchini)	cpemedB234
MELO3C031703.2	Cucurbita pepo (Zucchini)	cpemedB481
MELO3C031703.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C031703.2	Wild cucumber (PI 183967)	cpimedB552
MELO3C031703.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C031703.2	Cucumber (Chinese Long) v2	cumedB534
MELO3C031703.2	Melon (DHL92) v3.6.1	medmedB091
MELO3C031703.2	Bottle gourd (USVL1VR-Ls)	lsimedB280
MELO3C031703.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C031703.2	Watermelon (Charleston Gray)	medwcgB413
MELO3C031703.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C031703.2	Watermelon (97103) v1	medwmB448
MELO3C031703.2	Watermelon (97103) v1	medwmB472
MELO3C031703.2	Silver-seed gourd	carmedB0220
MELO3C031703.2	Silver-seed gourd	carmedB0384
MELO3C031703.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C031703.2	Cucumber (Chinese Long) v3	cucmedB566
MELO3C031703.2	Watermelon (97103) v2	medwmbB421
MELO3C031703.2	Watermelon (97103) v2	medwmbB424
MELO3C031703.2	Wax gourd	medwgoB531
MELO3C031703.2	Wax gourd	medwgoB558