MELO3C031122.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031122.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Basic helix-loop-helix transcription factor
Location	chr05 : 2781565 .. 2782827 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTATTATTGGAGAGAGCAACTCAACAGTCAGTCAAAACCCCATCTGACATTTACTCAATGTTAAACCAACCAACCAATAATCAGACCAACAAACTTTCAAGACCCATTTGTTTCACTTTCACCATAATATTGAAAATTATGAAGATGAGAAAAAACGAAAGTGAGTTATGAATTTTAATGGAAGGAATATTGCAATTTGCTGTTCAATCTGTTGAATGGACTTATTCTCTCTTCTGGCGTTTCTCTACTCAACAAAGGTATCATCTAATATATTATCAATTCTCTCTACTTTATAATGCAATTTAAGTTGTTACAATCCTTGTTTATAATCAAAATCAGGATGTTGGTTTGGGGAGATGGCTTCTACAATGGCCCTATCAAGACCACCAAGACCCTCCACCCTGCCGCCGCCGCCCAACAACAACACCAACAACATCAACATTCTGCCTCTCTTTCACTTCACAGAACCCATCAGCTTACGGATCTCTATAACTCCTTATCCGCCTCCGACACCCTCCGTCGCCCCACCTCCGCCGCTCTCTCCCCCGAGGACTTGACTGAGACTGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGGTTCGGGTGCGTTAACTTACAATAACTAAGTCTCCTCTAGTTGTAACTATGTGAATTTTGTTTTTGTTTTCGAAAATTGTTGCATTTGTTTTCTCGTGATTTCTTATCGATAAATGAAAGTAGTCTATAGAATTAATTTTCAAAAACAAAAATGCTTACCAAACCATACATTGATTATGAGTTATCTTCTATTTTACATGAAACAAGAAACTTTACGATGGATTTATATATACATATTATATATAAATGCAGATTGCCTGGAAAGGCATATTGCAAGAAGAAACATGTGTGGATAACAGGTGCAAATGAGATTGACAGTAAAATTTTCTCTAGAGCCATTCTTGCTAAGGTATATTCACTTGTGATCTCTACAACTCTATTTTCTAATCCTTTCTCCAACCTTTTAGAAGTTGATTACACTTTCATTACATTATTTCCCTTTTAACTCTTATATATATGCACCAAAATTTCTTAAACTAACAAATTAAATTCTAGGCTTATCATATAATAATATCTTATTCAATGATTATGTATCGTTTCACATCCTTTACAACACGATTCATATAATCAATTTTTGCACAACAATTTGGCATCTTAATTTATGTGAATAATTGACATATATGTCTTTGAAAATATTAGCTATTGCGTTAA

mRNA sequence

AAGTTATTATTGGAGAGAGCAACTCAACAGTCAGTCAAAACCCCATCTGACATTTACTCAATGTTAAACCAACCAACCAATAATCAGACCAACAAACTTTCAAGACCCATTTGTTTCACTTTCACCATAATATTGAAAATTATGAAGATGAGAAAAAACGAAAGTGAGTTATGAATTTTAATGGAAGGAATATTGCAATTTGCTGTTCAATCTGTTGAATGGACTTATTCTCTCTTCTGGCGTTTCTCTACTCAACAAAGGATGTTGGTTTGGGGAGATGGCTTCTACAATGGCCCTATCAAGACCACCAAGACCCTCCACCCTGCCGCCGCCGCCCAACAACAACACCAACAACATCAACATTCTGCCTCTCTTTCACTTCACAGAACCCATCAGCTTACGGATCTCTATAACTCCTTATCCGCCTCCGACACCCTCCGTCGCCCCACCTCCGCCGCTCTCTCCCCCGAGGACTTGACTGAGACTGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGGTTCGGATTGCCTGGAAAGGCATATTGCAAGAAGAAACATGTGTGGATAACAGGTGCAAATGAGATTGACAGTAAAATTTTCTCTAGAGCCATTCTTGCTAAGCTATTGCGTTAA

Coding sequence (CDS)

ATGGAAGGAATATTGCAATTTGCTGTTCAATCTGTTGAATGGACTTATTCTCTCTTCTGGCGTTTCTCTACTCAACAAAGGATGTTGGTTTGGGGAGATGGCTTCTACAATGGCCCTATCAAGACCACCAAGACCCTCCACCCTGCCGCCGCCGCCCAACAACAACACCAACAACATCAACATTCTGCCTCTCTTTCACTTCACAGAACCCATCAGCTTACGGATCTCTATAACTCCTTATCCGCCTCCGACACCCTCCGTCGCCCCACCTCCGCCGCTCTCTCCCCCGAGGACTTGACTGAGACTGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGGTTCGGATTGCCTGGAAAGGCATATTGCAAGAAGAAACATGTGTGGATAACAGGTGCAAATGAGATTGACAGTAAAATTTTCTCTAGAGCCATTCTTGCTAAGCTATTGCGTTAA

Protein sequence

MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAAAQQQHQQHQHSASLSLHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAKLLR

Homology

[Close]

BLAST of MELO3C031122.2 vs. NCBI nr
Match: XP_008449448.1 (PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis melo])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120
           XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL
Sbjct: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120

Query: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           PGKAYCKKKHVWITGANEIDSKIFSRAILAK
Sbjct: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 151

[Close]

BLAST of MELO3C031122.2 vs. NCBI nr
Match: XP_008449449.1 (PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis melo])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120
           XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL
Sbjct: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120

Query: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           PGKAYCKKKHVWITGANEIDSKIFSRAILAK
Sbjct: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 151

[Close]

BLAST of MELO3C031122.2 vs. NCBI nr
Match: XP_004140222.2 (PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 3.8e-69
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHP AXXXXXXXXXX
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHP-AXXXXXXXXXX 60

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120
           XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL
Sbjct: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120

Query: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           PGKAYCKKKHVWITGANEI+SKIFSRAILAK
Sbjct: 121 PGKAYCKKKHVWITGANEIESKIFSRAILAK 150

[Close]

BLAST of MELO3C031122.2 vs. NCBI nr
Match: XP_011657519.1 (PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 3.8e-69
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHP AXXXXXXXXXX
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHP-AXXXXXXXXXX 60

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120
           XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL
Sbjct: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120

Query: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           PGKAYCKKKHVWITGANEI+SKIFSRAILAK
Sbjct: 121 PGKAYCKKKHVWITGANEIESKIFSRAILAK 150

[Close]

BLAST of MELO3C031122.2 vs. NCBI nr
Match: XP_022995859.1 (basic helix-loop-helix protein A [Cucurbita maxima])

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 127/165 (76.97%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAA--------XX 60
           MEG+LQ AVQSVEWTYSL+WRFSTQ R+LVWGDGFYNGPIKTTKTLHPAA          
Sbjct: 1   MEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQ 60

Query: 61  XXXXXXXXXXXXXXXHRTHQLTDLYNSLSASDT------LRRPTSAALSPEDLTETEWFY 120
              XXXXXXXX     RTHQL DLYNSLSA+D+      LRRP SAALSPEDLTE+EWFY
Sbjct: 61  LQQXXXXXXXXSLSLQRTHQLRDLYNSLSAADSSTHAHPLRRP-SAALSPEDLTESEWFY 120

Query: 121 LLCLSFSFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           LLCLSFSFPPG GLPGKA+ K KHVWITGANEIDSKIFSRAILAK
Sbjct: 121 LLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 164

[Close]

BLAST of MELO3C031122.2 vs. TAIR10
Match: AT4G09820.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 181.4 bits (459), Expect = 4.2e-46
Identity = 87/152 (57.24%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           ++G+L+ AVQSV+WTYS+FW+F  QQR+LVWG+G+YNG IKT KT  PA           
Sbjct: 20  LQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPA---------EV 79

Query: 61  XXXXXXXHRTHQLTDLYNSLSASD-TLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFG 120
                   R+ QL +LY +L A + T       ALSPEDLTETEWFYL+C+SFSFPP  G
Sbjct: 80  TAEEAALERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSG 139

Query: 121 LPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           +PGKAY ++KHVW++GANE+DSK FSRAILAK
Sbjct: 140 MPGKAYARRKHVWLSGANEVDSKTFSRAILAK 162

[Close]

BLAST of MELO3C031122.2 vs. TAIR10
Match: AT1G63650.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-30
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 0


Query: 5   LQFAVQSVEWTYSLFWRFS-TQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXXXXX 64
           L  +V++++W+Y +FW  S +Q  +L WGDG+YNG IKT KT+  A              
Sbjct: 17  LAVSVRNIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAA---------EVKID 76

Query: 65  XXXXHRTHQLTDLYNSLS--------ASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFP 124
                R+ QL +LY SLS        +S   RR ++AALSPEDLT+TEW+YL+C+SF F 
Sbjct: 77  QLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFN 136

Query: 125 PGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
            G G+PG A    + +W+  A   DSK+F+R++LAK
Sbjct: 137 IGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAK 163

[Close]

BLAST of MELO3C031122.2 vs. TAIR10
Match: AT5G41315.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-30
Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = 0


Query: 5   LQFAVQSVEWTYSLFWRFS-TQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXXXXX 64
           L  +V++++W+Y +FW  S +Q  +L WGDG+YNG IKT KT+  +              
Sbjct: 18  LAVSVRNIQWSYGIFWSVSASQSGVLEWGDGYYNGDIKTRKTIQAS---------EIKAD 77

Query: 65  XXXXHRTHQLTDLYNSLS-----------ASDTLRRPTSAALSPEDLTETEWFYLLCLSF 124
                R+ QL++LY SLS            S   RR ++AALSPEDL +TEW+YL+C+SF
Sbjct: 78  QLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSF 137

Query: 125 SFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
            F  G G+PG+ +   + +W+  A+  DSK+FSR++LAK
Sbjct: 138 VFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAK 167

[Close]

BLAST of MELO3C031122.2 vs. TAIR10
Match: AT4G00480.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-19
Identity = 52/164 (31.71%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 5   LQFAVQSVEWTYSLFWRFS-TQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXXXXX 64
           L  AV+SV+W+Y++FW  S TQ  +L WG+G YNG +K  K  + +              
Sbjct: 27  LALAVRSVQWSYAIFWSSSLTQPGVLEWGEGCYNGDMKKRKKSYES------------HY 86

Query: 65  XXXXHRTHQLTDLYNSLSASDT----------------LRRPTSAALSPEDLTETEWFYL 124
                ++ +L  LY S+   D+                    TS  LSP+DL++ EW+YL
Sbjct: 87  KYGLQKSKELRKLYLSMLEGDSGTTVSTTHDNLNDXXXXCHSTSMMLSPDDLSDEEWYYL 146

Query: 125 LCLSFSFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           + +S+ F P   LPG+A    + +W+  A   ++K+FSR++LA+
Sbjct: 147 VSMSYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLAR 178

[Close]

BLAST of MELO3C031122.2 vs. TAIR10
Match: AT1G32640.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10
Identity = 41/137 (29.93%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 14  WTYSLFWRFS---TQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXXXXXXXXXHRT 73
           WTY++FW+ S   +   +L WGDG+Y G          ++                 +R 
Sbjct: 83  WTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSS------SPPFSTPADQEYRK 142

Query: 74  HQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGLPGKAYCKKKH 133
             L +L NSL +      P+  A+  E++T+TEWF+L+ ++ SF  G GL GKA+     
Sbjct: 143 KVLREL-NSLISGGV--APSDDAVD-EEVTDTEWFFLVSMTQSFACGAGLAGKAFATGNA 202

Query: 134 VWITGANEIDSKIFSRA 148
           VW++G++++      RA
Sbjct: 203 VWVSGSDQLSGSGCERA 209

[Close]

BLAST of MELO3C031122.2 vs. Swiss-Prot
Match: sp|E3SXU5|BHLHM_PEA (Truncated basic helix-loop-helix protein A OS=Pisum sativum OX=3888 GN=BHLH PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-46
Identity = 92/154 (59.74%), Postives = 112/154 (72.73%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           ++ +LQ AVQSV+WTYSLFW+   QQ +LVWGDG+YNG IKT KT+ P            
Sbjct: 13  LQNMLQAAVQSVQWTYSLFWQICPQQLILVWGDGYYNGAIKTRKTVQP---------MEV 72

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDT---LRRPTSAALSPEDLTETEWFYLLCLSFSFPPG 120
                   R+ QL +LY SLSA +T    RRP  A+LSPEDLTE+EWFYL+C+SFSFPPG
Sbjct: 73  SAEEASLQRSQQLRELYESLSAGETNPPTRRP-CASLSPEDLTESEWFYLMCVSFSFPPG 132

Query: 121 FGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
            GLPGKAY +++HVW+TGANE+DSK FSRAILAK
Sbjct: 133 VGLPGKAYARRQHVWLTGANEVDSKTFSRAILAK 156

[Close]

BLAST of MELO3C031122.2 vs. Swiss-Prot
Match: sp|E3SXU4|BHLHW_PEA (Basic helix-loop-helix protein A OS=Pisum sativum OX=3888 GN=BHLH PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-46
Identity = 92/154 (59.74%), Postives = 112/154 (72.73%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           ++ +LQ AVQSV+WTYSLFW+   QQ +LVWGDG+YNG IKT KT+ P            
Sbjct: 13  LQNMLQAAVQSVQWTYSLFWQICPQQLILVWGDGYYNGAIKTRKTVQP---------MEV 72

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDT---LRRPTSAALSPEDLTETEWFYLLCLSFSFPPG 120
                   R+ QL +LY SLSA +T    RRP  A+LSPEDLTE+EWFYL+C+SFSFPPG
Sbjct: 73  SAEEASLQRSQQLRELYESLSAGETNPPTRRP-CASLSPEDLTESEWFYLMCVSFSFPPG 132

Query: 121 FGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
            GLPGKAY +++HVW+TGANE+DSK FSRAILAK
Sbjct: 133 VGLPGKAYARRQHVWLTGANEVDSKTFSRAILAK 156

[Close]

BLAST of MELO3C031122.2 vs. Swiss-Prot
Match: sp|Q9FT81|TT8_ARATH (Transcription factor TT8 OS=Arabidopsis thaliana OX=3702 GN=TT8 PE=1 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 7.5e-45
Identity = 87/152 (57.24%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           ++G+L+ AVQSV+WTYS+FW+F  QQR+LVWG+G+YNG IKT KT  PA           
Sbjct: 20  LQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPA---------EV 79

Query: 61  XXXXXXXHRTHQLTDLYNSLSASD-TLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFG 120
                   R+ QL +LY +L A + T       ALSPEDLTETEWFYL+C+SFSFPP  G
Sbjct: 80  TAEEAALERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSG 139

Query: 121 LPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           +PGKAY ++KHVW++GANE+DSK FSRAILAK
Sbjct: 140 MPGKAYARRKHVWLSGANEVDSKTFSRAILAK 162

[Close]

BLAST of MELO3C031122.2 vs. Swiss-Prot
Match: sp|Q9CAD0|EGL1_ARATH (Transcription factor EGL1 OS=Arabidopsis thaliana OX=3702 GN=BHLH2 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.6e-29
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 0


Query: 5   LQFAVQSVEWTYSLFWRFS-TQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXXXXX 64
           L  +V++++W+Y +FW  S +Q  +L WGDG+YNG IKT KT+  A              
Sbjct: 17  LAVSVRNIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAA---------EVKID 76

Query: 65  XXXXHRTHQLTDLYNSLS--------ASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFP 124
                R+ QL +LY SLS        +S   RR ++AALSPEDLT+TEW+YL+C+SF F 
Sbjct: 77  QLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFN 136

Query: 125 PGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
            G G+PG A    + +W+  A   DSK+F+R++LAK
Sbjct: 137 IGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAK 163

[Close]

BLAST of MELO3C031122.2 vs. Swiss-Prot
Match: sp|Q9FN69|GL3_ARATH (Transcription factor GLABRA 3 OS=Arabidopsis thaliana OX=3702 GN=GL3 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.6e-29
Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = 0


Query: 5   LQFAVQSVEWTYSLFWRFS-TQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXXXXX 64
           L  +V++++W+Y +FW  S +Q  +L WGDG+YNG IKT KT+  +              
Sbjct: 18  LAVSVRNIQWSYGIFWSVSASQSGVLEWGDGYYNGDIKTRKTIQAS---------EIKAD 77

Query: 65  XXXXHRTHQLTDLYNSLS-----------ASDTLRRPTSAALSPEDLTETEWFYLLCLSF 124
                R+ QL++LY SLS            S   RR ++AALSPEDL +TEW+YL+C+SF
Sbjct: 78  QLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSF 137

Query: 125 SFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
            F  G G+PG+ +   + +W+  A+  DSK+FSR++LAK
Sbjct: 138 VFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAK 167

[Close]

BLAST of MELO3C031122.2 vs. TrEMBL
Match: tr|A0A1S3BLF6|A0A1S3BLF6_CUCME (basic helix-loop-helix protein A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491332 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-71
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120
           XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL
Sbjct: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120

Query: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           PGKAYCKKKHVWITGANEIDSKIFSRAILAK
Sbjct: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 151

[Close]

BLAST of MELO3C031122.2 vs. TrEMBL
Match: tr|A0A1S3BM28|A0A1S3BM28_CUCME (basic helix-loop-helix protein A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491332 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-71
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120
           XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL
Sbjct: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFGL 120

Query: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           PGKAYCKKKHVWITGANEIDSKIFSRAILAK
Sbjct: 121 PGKAYCKKKHVWITGANEIDSKIFSRAILAK 151

[Close]

BLAST of MELO3C031122.2 vs. TrEMBL
Match: tr|A0A0A0KEC0|A0A0A0KEC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409990 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHP AXXXXXXXXXX
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHP-AXXXXXXXXXX 60

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFG 120
           XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFG
Sbjct: 61  XXXXXXXHRTHQLTDLYNSLSASDTLRRPTSAALSPEDLTETEWFYLLCLSFSFPPGFG 118

[Close]

BLAST of MELO3C031122.2 vs. TrEMBL
Match: tr|A0A075LVT4|A0A075LVT4_POPPZ (Basic helix-loop-helix transcription factor OS=Populus tremula x Populus tremuloides OX=47664 GN=bHLH131 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 8.6e-46
Identity = 97/157 (61.78%), Postives = 114/157 (72.61%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           ++ +LQ AVQSV+WTYSLFW+   QQ +LVWGDG+YNGPIKT KT+ P            
Sbjct: 9   LQTMLQAAVQSVQWTYSLFWQMCPQQGILVWGDGYYNGPIKTRKTVQP---------MEV 68

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDT---LRRPTSAALSPEDLTETEWFYLLCLSFSFPPG 120
                   R+ QL +LY+SLS  +T    RRP  AALSPEDLTETEWFYL+C+SFSFPPG
Sbjct: 69  TTEEASLQRSQQLRELYDSLSIGETNQPARRP-CAALSPEDLTETEWFYLMCVSFSFPPG 128

Query: 121 FGLPGKAYCKKKHVWITGANEIDSKIFSRAILAKLLR 155
            GLPGKAY ++KHVW+TGANEIDSK FSRAILAK  R
Sbjct: 129 VGLPGKAYARRKHVWLTGANEIDSKTFSRAILAKSAR 155

[Close]

BLAST of MELO3C031122.2 vs. TrEMBL
Match: tr|A0A218W954|A0A218W954_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025373 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 95/155 (61.29%), Postives = 114/155 (73.55%), Query Frame = 0


Query: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAXXXXXXXXXX 60
           ++  LQ AVQSV+WTYSLFW+   QQ +L+WGDG+YNGPIKT KT+ P            
Sbjct: 10  LQSTLQAAVQSVKWTYSLFWQICPQQGILIWGDGYYNGPIKTRKTVQP---------MEV 69

Query: 61  XXXXXXXHRTHQLTDLYNSLSASDT----LRRPTSAALSPEDLTETEWFYLLCLSFSFPP 120
                   R+ QL +LY+SLSA +T     RRP SAALSPEDLTETEWFYL+C+SFSFPP
Sbjct: 70  SAEEASLQRSQQLRELYDSLSACETNQPPARRP-SAALSPEDLTETEWFYLMCVSFSFPP 129

Query: 121 GFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 152
           G GLPGKAY +++HVW+TGANE+DSK FSRAILAK
Sbjct: 130 GVGLPGKAYSRRQHVWLTGANEVDSKTFSRAILAK 154

The following BLAST results are available for this feature:

BLAST of MELO3C031122.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449448.1	1.8e-71	100.00	PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis melo]	[more]
XP_008449449.1	1.8e-71	100.00	PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis melo]	[more]
XP_004140222.2	3.8e-69	98.68	PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis sativus]	[more]
XP_011657519.1	3.8e-69	98.68	PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis sativus]	[more]
XP_022995859.1	1.9e-57	76.97	basic helix-loop-helix protein A [Cucurbita maxima]	[more]

BLAST of MELO3C031122.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09820.1	4.2e-46	57.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G63650.1	4.2e-30	42.31	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G41315.1	4.2e-30	40.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00480.2	4.4e-19	31.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G32640.1	1.3e-10	29.93	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

BLAST of MELO3C031122.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|E3SXU5\|BHLHM_PEA	2.3e-46	59.74	Truncated basic helix-loop-helix protein A OS=Pisum sativum OX=3888 GN=BHLH PE=3...	[more]
sp\|E3SXU4\|BHLHW_PEA	2.3e-46	59.74	Basic helix-loop-helix protein A OS=Pisum sativum OX=3888 GN=BHLH PE=3 SV=1	[more]
sp\|Q9FT81\|TT8_ARATH	7.5e-45	57.24	Transcription factor TT8 OS=Arabidopsis thaliana OX=3702 GN=TT8 PE=1 SV=2	[more]
sp\|Q9CAD0\|EGL1_ARATH	7.6e-29	42.31	Transcription factor EGL1 OS=Arabidopsis thaliana OX=3702 GN=BHLH2 PE=1 SV=1	[more]
sp\|Q9FN69\|GL3_ARATH	7.6e-29	40.25	Transcription factor GLABRA 3 OS=Arabidopsis thaliana OX=3702 GN=GL3 PE=1 SV=1	[more]

BLAST of MELO3C031122.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BLF6\|A0A1S3BLF6_CUCME	1.2e-71	100.00	basic helix-loop-helix protein A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
tr\|A0A1S3BM28\|A0A1S3BM28_CUCME	1.2e-71	100.00	basic helix-loop-helix protein A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
tr\|A0A0A0KEC0\|A0A0A0KEC0_CUCSA	1.3e-49	99.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409990 PE=4 SV=1	[more]
tr\|A0A075LVT4\|A0A075LVT4_POPPZ	8.6e-46	61.78	Basic helix-loop-helix transcription factor OS=Populus tremula x Populus tremulo...	[more]
tr\|A0A218W954\|A0A218W954_PUNGR	1.1e-45	61.29	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025373 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025610	MYC/MYB_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0044699	single-organism process
biological_process	GO:0009987	cellular process
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031122.2.1	MELO3C031122.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025610	Transcription factor MYC/MYB N-terminal	PFAM	PF14215	bHLH-MYC_N	coord: 5..151 e-value: 2.3E-33 score: 115.8
None	No IPR available	PANTHER	PTHR11514	MYC	coord: 3..151
None	No IPR available	PANTHER	PTHR11514:SF93	TRANSCRIPTION FACTOR TT8	coord: 3..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C031122.2	Csa6G409990	Cucumber (Chinese Long) v2	cumedB469
MELO3C031122.2	CSPI06G21980	Wild cucumber (PI 183967)	cpimedB478
MELO3C031122.2	CmaCh02G018030	Cucurbita maxima (Rimu)	cmamedB659
MELO3C031122.2	CmoCh02G018490	Cucurbita moschata (Rifu)	cmomedB646
MELO3C031122.2	Lsi05G009260	Bottle gourd (USVL1VR-Ls)	lsimedB377
MELO3C031122.2	Cp4.1LG05g01810	Cucurbita pepo (Zucchini)	cpemedB828
MELO3C031122.2	CsGy6G021270	Cucumber (Gy14) v2	cgybmedB425
MELO3C031122.2	Cla006058	Watermelon (97103) v1	medwmB400
MELO3C031122.2	ClCG07G000220	Watermelon (Charleston Gray)	medwcgB391
MELO3C031122.2	Cla97C07G128490	Watermelon (97103) v2	medwmbB393
MELO3C031122.2	Bhi05G000251	Wax gourd	medwgoB480
MELO3C031122.2	CsaV3_6G037080	Cucumber (Chinese Long) v3	cucmedB488

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C031122.2	Cucumber (Gy14) v1	cgymedB327
MELO3C031122.2	Cucurbita maxima (Rimu)	cmamedB549
MELO3C031122.2	Cucurbita maxima (Rimu)	cmamedB555
MELO3C031122.2	Cucurbita moschata (Rifu)	cmomedB538
MELO3C031122.2	Cucurbita moschata (Rifu)	cmomedB543
MELO3C031122.2	Cucurbita pepo (Zucchini)	cpemedB276
MELO3C031122.2	Cucurbita pepo (Zucchini)	cpemedB280
MELO3C031122.2	Silver-seed gourd	carmedB0758