Cp4.1LG05g01810 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g01810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBHLH transcription factor
LocationCp4.1LG05 : 64191 .. 64921 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATCAAAATGGAAGGGTTGTTGCAGTTGGCGGTGCAATCCGTGGAGTGGACTTACTCTCTCTACTGGCGATTCTCCACTCAACACCGGTACTTCAAACTATGCATACATATTACTAGCTGCTTTTAGTTTCTTTGAGTTCTTCACAGATCTATCTCTCCACTTCATAATACTATACTATACTATATTGAATCATCGGATTATGGTTTATGACTGAATGATCAGGGTGTTGGTTTGGGGAGATGGGTTCTACAACGGACCCATCAAGACCACCAAGACGTTGCACCCCGCAGCTGCCACCGACTTCACCGGCCACCACCAGCAGCAGCAGCAACAACAACTACAACTACAACTACAAGCAGCCTCTCTGTCTCTTCAAAGAACCCATCAGCTCAGGGATCTTTACAACTCCTTATCCGCCGCCGACAGTAGCACTCACACCCACCCCCTCCGCCGCCCCTCTGCCGCCCTCTCTCCCGAGGACTTGACGGAGTCCGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGACTCGGGTAAGCTTTCTGGTTACTAATGCTCTAATTTCAAATCAATTTTATTTTTCTTTCTTTAAAAAGGAAAAAAAAATTACTTATACAGATTGCCTGGGAAGGCATTTGCGAAGAACAAACATGTGTGGATTACAGGTGCTAATGAGATTGATAGCAAAATTTTCTCCAGAGCTATTCTTGCTAAG

mRNA sequence

ATGTTGATCAAAATGGAAGGGTTGTTGCAGTTGGCGGTGCAATCCGTGGAGTGGACTTACTCTCTCTACTGGCGATTCTCCACTCAACACCGGGTGTTGGTTTGGGGAGATGGGTTCTACAACGGACCCATCAAGACCACCAAGACGTTGCACCCCGCAGCTGCCACCGACTTCACCGGCCACCACCAGCAGCAGCAGCAACAACAACTACAACTACAACTACAAGCAGCCTCTCTGTCTCTTCAAAGAACCCATCAGCTCAGGGATCTTTACAACTCCTTATCCGCCGCCGACAGTAGCACTCACACCCACCCCCTCCGCCGCCCCTCTGCCGCCCTCTCTCCCGAGGACTTGACGGAGTCCGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGACTCGGATTGCCTGGGAAGGCATTTGCGAAGAACAAACATGTGTGGATTACAGGTGCTAATGAGATTGATAGCAAAATTTTCTCCAGAGCTATTCTTGCTAAG

Coding sequence (CDS)

ATGTTGATCAAAATGGAAGGGTTGTTGCAGTTGGCGGTGCAATCCGTGGAGTGGACTTACTCTCTCTACTGGCGATTCTCCACTCAACACCGGGTGTTGGTTTGGGGAGATGGGTTCTACAACGGACCCATCAAGACCACCAAGACGTTGCACCCCGCAGCTGCCACCGACTTCACCGGCCACCACCAGCAGCAGCAGCAACAACAACTACAACTACAACTACAAGCAGCCTCTCTGTCTCTTCAAAGAACCCATCAGCTCAGGGATCTTTACAACTCCTTATCCGCCGCCGACAGTAGCACTCACACCCACCCCCTCCGCCGCCCCTCTGCCGCCCTCTCTCCCGAGGACTTGACGGAGTCCGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGACTCGGATTGCCTGGGAAGGCATTTGCGAAGAACAAACATGTGTGGATTACAGGTGCTAATGAGATTGATAGCAAAATTTTCTCCAGAGCTATTCTTGCTAAG

Protein sequence

MLIKMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEWFYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK
Homology
[Close]
BLAST of Cp4.1LG05g01810 vs. Swiss-Prot
Match: BHLHM_PEA (Truncated basic helix-loop-helix protein A OS=Pisum sativum GN=BHLH PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-50
Identity = 97/167 (58.08%), Postives = 123/167 (73.65%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           K++ +LQ AVQSV+WTYSL+W+   Q  +LVWGDG+YNG IKT KT+ P           
Sbjct: 12  KLQNMLQAAVQSVQWTYSLFWQICPQQLILVWGDGYYNGAIKTRKTVQP----------- 71

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++ A   SLQR+ QLR+LY SLSA +++    P RRP A+LSPEDLTESEW
Sbjct: 72  --------MEVSAEEASLQRSQQLRELYESLSAGETNP---PTRRPCASLSPEDLTESEW 131

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKA+A+ +HVW+TGANE+DSK FSRAILAK
Sbjct: 132 FYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFSRAILAK 156

[Close]
BLAST of Cp4.1LG05g01810 vs. Swiss-Prot
Match: BHLHW_PEA (Basic helix-loop-helix protein A OS=Pisum sativum GN=BHLH PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-50
Identity = 97/167 (58.08%), Postives = 123/167 (73.65%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           K++ +LQ AVQSV+WTYSL+W+   Q  +LVWGDG+YNG IKT KT+ P           
Sbjct: 12  KLQNMLQAAVQSVQWTYSLFWQICPQQLILVWGDGYYNGAIKTRKTVQP----------- 71

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++ A   SLQR+ QLR+LY SLSA +++    P RRP A+LSPEDLTESEW
Sbjct: 72  --------MEVSAEEASLQRSQQLRELYESLSAGETNP---PTRRPCASLSPEDLTESEW 131

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKA+A+ +HVW+TGANE+DSK FSRAILAK
Sbjct: 132 FYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFSRAILAK 156

[Close]
BLAST of Cp4.1LG05g01810 vs. Swiss-Prot
Match: TT8_ARATH (Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.5e-46
Identity = 91/167 (54.49%), Postives = 118/167 (70.66%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           +++GLL+ AVQSV+WTYS++W+F  Q RVLVWG+G+YNG IKT KT  PA  T       
Sbjct: 19  ELQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVT------- 78

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                       A   +L+R+ QLR+LY +L A +S++      R   ALSPEDLTE+EW
Sbjct: 79  ------------AEEAALERSQQLRELYETLLAGESTSEA----RACTALSPEDLTETEW 138

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPP  G+PGKA+A+ KHVW++GANE+DSK FSRAILAK
Sbjct: 139 FYLMCVSFSFPPPSGMPGKAYARRKHVWLSGANEVDSKTFSRAILAK 162

[Close]
BLAST of Cp4.1LG05g01810 vs. Swiss-Prot
Match: GL3_ARATH (Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30
Identity = 71/169 (42.01%), Postives = 107/169 (63.31%), Query Frame = 1 

Query: 9   LQLAVQSVEWTYSLYWRFS-TQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQ 68
           L ++V++++W+Y ++W  S +Q  VL WGDG+YNG IKT KT+  +              
Sbjct: 18  LAVSVRNIQWSYGIFWSVSASQSGVLEWGDGYYNGDIKTRKTIQAS-------------- 77

Query: 69  QQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTH-----THPLRRPSA-ALSPEDLTES 128
                +++A  L L+R+ QL +LY SLS A+SS+      +   RR SA ALSPEDL ++
Sbjct: 78  -----EIKADQLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADT 137

Query: 129 EWFYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           EW+YL+C+SF F  G G+PG+ FA  + +W+  A+  DSK+FSR++LAK
Sbjct: 138 EWYYLVCMSFVFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAK 167

[Close]
BLAST of Cp4.1LG05g01810 vs. Swiss-Prot
Match: EGL1_ARATH (Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.4e-30
Identity = 71/166 (42.77%), Postives = 105/166 (63.25%), Query Frame = 1 

Query: 9   LQLAVQSVEWTYSLYWRFS-TQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQ 68
           L ++V++++W+Y ++W  S +Q  VL WGDG+YNG IKT KT+  A              
Sbjct: 17  LAVSVRNIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAA-------------- 76

Query: 69  QQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTH--THPLRRPSA-ALSPEDLTESEWF 128
                +++   L L+R+ QLR+LY SLS A+SS    +   RR SA ALSPEDLT++EW+
Sbjct: 77  -----EVKIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWY 136

Query: 129 YLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           YL+C+SF F  G G+PG A +  + +W+  A   DSK+F+R++LAK
Sbjct: 137 YLVCMSFVFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAK 163

[Close]
BLAST of Cp4.1LG05g01810 vs. TrEMBL
Match: A0A0K0M5B0_CAMSI (BHLH transcription factor MYC1 OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-49
Identity = 98/167 (58.68%), Postives = 125/167 (74.85%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           +++ +LQ AVQ+V+WTYSL+W+   Q  +LVWGDG+YNG IKT KT+ P           
Sbjct: 8   RLQSMLQTAVQTVQWTYSLFWQLCPQQGILVWGDGYYNGAIKTRKTVQP----------- 67

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++ A   SLQR+ QLR+LY+SLSA +S+  T   RRP AALSPEDLTESEW
Sbjct: 68  --------MEVSAEEASLQRSQQLRELYDSLSAGESNQQT---RRPCAALSPEDLTESEW 127

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKA+AK +HVW+TGANE+DSK+FSRAILAK
Sbjct: 128 FYLMCVSFSFPPGVGLPGKAYAKRQHVWLTGANEVDSKVFSRAILAK 152

[Close]
BLAST of Cp4.1LG05g01810 vs. TrEMBL
Match: A0A0S3SS24_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G236400 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-49
Identity = 99/167 (59.28%), Postives = 122/167 (73.05%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           K++ +LQ AVQSV WTYSL+W+   Q  +LVWGDG+YNG IKT KT+ P           
Sbjct: 8   KLQSMLQAAVQSVHWTYSLFWQLCPQQVILVWGDGYYNGAIKTRKTVQP----------- 67

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++ A   SLQR+ QLR+LY SLSA +++    P RRP AALSPEDLTESEW
Sbjct: 68  --------MEVSAEEASLQRSQQLRELYESLSAGETNP---PTRRPCAALSPEDLTESEW 127

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKAFA+ +HVW+TGANE+DSK FSRAILAK
Sbjct: 128 FYLMCVSFSFPPGVGLPGKAFARRQHVWLTGANEVDSKTFSRAILAK 152

[Close]
BLAST of Cp4.1LG05g01810 vs. TrEMBL
Match: A0A0L9TWZ8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g116600 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-49
Identity = 99/167 (59.28%), Postives = 122/167 (73.05%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           K++ +LQ AVQSV WTYSL+W+   Q  +LVWGDG+YNG IKT KT+ P           
Sbjct: 8   KLQSMLQAAVQSVHWTYSLFWQLCPQQVILVWGDGYYNGAIKTRKTVQP----------- 67

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++ A   SLQR+ QLR+LY SLSA +++    P RRP AALSPEDLTESEW
Sbjct: 68  --------MEVSAEEASLQRSQQLRELYESLSAGETNP---PTRRPCAALSPEDLTESEW 127

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKAFA+ +HVW+TGANE+DSK FSRAILAK
Sbjct: 128 FYLMCVSFSFPPGVGLPGKAFARRQHVWLTGANEVDSKTFSRAILAK 152

[Close]
BLAST of Cp4.1LG05g01810 vs. TrEMBL
Match: A0A067JCD9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21943 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-48
Identity = 97/167 (58.08%), Postives = 124/167 (74.25%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           +++ +LQ AVQSV+WTYSL+W+   Q  +LVWGDG+YNG IKT KT+ P           
Sbjct: 9   RLQSMLQAAVQSVQWTYSLFWQICPQQGILVWGDGYYNGAIKTRKTVQP----------- 68

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++ A  +SLQR+ QLR+LY SLSA +++    P RRP AALSPEDLTESEW
Sbjct: 69  --------MEVSAEEVSLQRSQQLRELYESLSAGETN---QPARRPCAALSPEDLTESEW 128

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKA+++ +HVW+TGANEIDSK FSRAILAK
Sbjct: 129 FYLMCVSFSFPPGVGLPGKAYSRRQHVWLTGANEIDSKTFSRAILAK 153

[Close]
BLAST of Cp4.1LG05g01810 vs. TrEMBL
Match: A0A075LVT4_9ROSI (Basic helix-loop-helix transcription factor OS=Populus tremula x Populus tremuloides GN=bHLH131 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-48
Identity = 97/167 (58.08%), Postives = 123/167 (73.65%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           +++ +LQ AVQSV+WTYSL+W+   Q  +LVWGDG+YNGPIKT KT+ P           
Sbjct: 8   RLQTMLQAAVQSVQWTYSLFWQMCPQQGILVWGDGYYNGPIKTRKTVQP----------- 67

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++     SLQR+ QLR+LY+SLS  +++    P RRP AALSPEDLTE+EW
Sbjct: 68  --------MEVTTEEASLQRSQQLRELYDSLSIGETN---QPARRPCAALSPEDLTETEW 127

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKA+A+ KHVW+TGANEIDSK FSRAILAK
Sbjct: 128 FYLMCVSFSFPPGVGLPGKAYARRKHVWLTGANEIDSKTFSRAILAK 152

[Close]
BLAST of Cp4.1LG05g01810 vs. TAIR10
Match: AT4G09820.1 (AT4G09820.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-47
Identity = 91/167 (54.49%), Postives = 118/167 (70.66%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           +++GLL+ AVQSV+WTYS++W+F  Q RVLVWG+G+YNG IKT KT  PA  T       
Sbjct: 19  ELQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVT------- 78

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                       A   +L+R+ QLR+LY +L A +S++      R   ALSPEDLTE+EW
Sbjct: 79  ------------AEEAALERSQQLRELYETLLAGESTSEA----RACTALSPEDLTETEW 138

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPP  G+PGKA+A+ KHVW++GANE+DSK FSRAILAK
Sbjct: 139 FYLMCVSFSFPPPSGMPGKAYARRKHVWLSGANEVDSKTFSRAILAK 162

[Close]
BLAST of Cp4.1LG05g01810 vs. TAIR10
Match: AT5G41315.1 (AT5G41315.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 134.0 bits (336), Expect = 8.5e-32
Identity = 71/169 (42.01%), Postives = 107/169 (63.31%), Query Frame = 1 

Query: 9   LQLAVQSVEWTYSLYWRFS-TQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQ 68
           L ++V++++W+Y ++W  S +Q  VL WGDG+YNG IKT KT+  +              
Sbjct: 18  LAVSVRNIQWSYGIFWSVSASQSGVLEWGDGYYNGDIKTRKTIQAS-------------- 77

Query: 69  QQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTH-----THPLRRPSA-ALSPEDLTES 128
                +++A  L L+R+ QL +LY SLS A+SS+      +   RR SA ALSPEDL ++
Sbjct: 78  -----EIKADQLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADT 137

Query: 129 EWFYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           EW+YL+C+SF F  G G+PG+ FA  + +W+  A+  DSK+FSR++LAK
Sbjct: 138 EWYYLVCMSFVFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAK 167

[Close]
BLAST of Cp4.1LG05g01810 vs. TAIR10
Match: AT1G63650.1 (AT1G63650.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 2.5e-31
Identity = 71/166 (42.77%), Postives = 105/166 (63.25%), Query Frame = 1 

Query: 9   LQLAVQSVEWTYSLYWRFS-TQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQ 68
           L ++V++++W+Y ++W  S +Q  VL WGDG+YNG IKT KT+  A              
Sbjct: 17  LAVSVRNIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAA-------------- 76

Query: 69  QQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTH--THPLRRPSA-ALSPEDLTESEWF 128
                +++   L L+R+ QLR+LY SLS A+SS    +   RR SA ALSPEDLT++EW+
Sbjct: 77  -----EVKIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWY 136

Query: 129 YLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           YL+C+SF F  G G+PG A +  + +W+  A   DSK+F+R++LAK
Sbjct: 137 YLVCMSFVFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAK 163

[Close]
BLAST of Cp4.1LG05g01810 vs. TAIR10
Match: AT4G00480.2 (AT4G00480.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21
Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 1 

Query: 9   LQLAVQSVEWTYSLYWRFS-TQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQ 68
           L LAV+SV+W+Y+++W  S TQ  VL WG+G YNG +K  K         +  H++    
Sbjct: 27  LALAVRSVQWSYAIFWSSSLTQPGVLEWGEGCYNGDMKKRKK-------SYESHYKY--- 86

Query: 69  QQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTH---THP--------LRRPSAALSPE 128
                        LQ++ +LR LY S+   DS T    TH             S  LSP+
Sbjct: 87  ------------GLQKSKELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPD 146

Query: 129 DLTESEWFYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           DL++ EW+YL+ +S+ F P   LPG+A A  + +W+  A   ++K+FSR++LA+
Sbjct: 147 DLSDEEWYYLVSMSYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLAR 178

[Close]
BLAST of Cp4.1LG05g01810 vs. TAIR10
Match: AT1G32640.1 (AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 42/152 (27.63%), Postives = 74/152 (48.68%), Query Frame = 1 

Query: 18  WTYSLYWRFSTQHR---VLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQQQLQLQL 77
           WTY+++W+ S       VL WGDG+Y G          +++  F+    Q+ ++++    
Sbjct: 83  WTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFSTPADQEYRKKV---- 142

Query: 78  QAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEWFYLLCLSFSFP 137
                       LR+L + +S   +         PS     E++T++EWF+L+ ++ SF 
Sbjct: 143 ------------LRELNSLISGGVA---------PSDDAVDEEVTDTEWFFLVSMTQSFA 202

Query: 138 PGLGLPGKAFAKNKHVWITGANEIDSKIFSRA 167
            G GL GKAFA    VW++G++++      RA
Sbjct: 203 CGAGLAGKAFATGNAVWVSGSDQLSGSGCERA 209

[Close]
BLAST of Cp4.1LG05g01810 vs. NCBI nr
Match: gi|659097110|ref|XP_008449448.1| (PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.9e-62
Identity = 131/167 (78.44%), Postives = 139/167 (83.23%), Query Frame = 1 

Query: 5   MEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQ 64
           MEG+LQ AVQSVEWTYSL+WRFSTQ R+LVWGDGFYNGPIKTTKTLHPAAA        Q
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAAA-------Q 60

Query: 65  QQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRP-SAALSPEDLTESEW 124
           QQ QQ Q    +ASLSL RTHQL DLYNSLSA+D+      LRRP SAALSPEDLTE+EW
Sbjct: 61  QQHQQHQ---HSASLSLHRTHQLTDLYNSLSASDT------LRRPTSAALSPEDLTETEW 120

Query: 125 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYLLCLSFSFPPG GLPGKA+ K KHVWITGANEIDSKIFSRAILAK
Sbjct: 121 FYLLCLSFSFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 151

[Close]
BLAST of Cp4.1LG05g01810 vs. NCBI nr
Match: gi|659097112|ref|XP_008449449.1| (PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.9e-62
Identity = 131/167 (78.44%), Postives = 139/167 (83.23%), Query Frame = 1 

Query: 5   MEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQ 64
           MEG+LQ AVQSVEWTYSL+WRFSTQ R+LVWGDGFYNGPIKTTKTLHPAAA        Q
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAAA-------Q 60

Query: 65  QQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRP-SAALSPEDLTESEW 124
           QQ QQ Q    +ASLSL RTHQL DLYNSLSA+D+      LRRP SAALSPEDLTE+EW
Sbjct: 61  QQHQQHQ---HSASLSLHRTHQLTDLYNSLSASDT------LRRPTSAALSPEDLTETEW 120

Query: 125 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYLLCLSFSFPPG GLPGKA+ K KHVWITGANEIDSKIFSRAILAK
Sbjct: 121 FYLLCLSFSFPPGFGLPGKAYCKKKHVWITGANEIDSKIFSRAILAK 151

[Close]
BLAST of Cp4.1LG05g01810 vs. NCBI nr
Match: gi|778716191|ref|XP_011657519.1| (PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 3.3e-62
Identity = 130/167 (77.84%), Postives = 139/167 (83.23%), Query Frame = 1 

Query: 5   MEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQ 64
           MEG+LQ AVQSVEWTYSL+WRFSTQ R+LVWGDGFYNGPIKTTKTLHPAAA       QQ
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAAA------QQ 60

Query: 65  QQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRP-SAALSPEDLTESEW 124
           QQQ Q      +ASLSL RTHQL DLYNSLSA+D+      LRRP SAALSPEDLTE+EW
Sbjct: 61  QQQHQ-----HSASLSLHRTHQLTDLYNSLSASDT------LRRPTSAALSPEDLTETEW 120

Query: 125 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYLLCLSFSFPPG GLPGKA+ K KHVWITGANEI+SKIFSRAILAK
Sbjct: 121 FYLLCLSFSFPPGFGLPGKAYCKKKHVWITGANEIESKIFSRAILAK 150

[Close]
BLAST of Cp4.1LG05g01810 vs. NCBI nr
Match: gi|778716187|ref|XP_004140222.2| (PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 3.3e-62
Identity = 130/167 (77.84%), Postives = 139/167 (83.23%), Query Frame = 1 

Query: 5   MEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQ 64
           MEG+LQ AVQSVEWTYSL+WRFSTQ R+LVWGDGFYNGPIKTTKTLHPAAA       QQ
Sbjct: 1   MEGILQFAVQSVEWTYSLFWRFSTQQRMLVWGDGFYNGPIKTTKTLHPAAAA------QQ 60

Query: 65  QQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRP-SAALSPEDLTESEW 124
           QQQ Q      +ASLSL RTHQL DLYNSLSA+D+      LRRP SAALSPEDLTE+EW
Sbjct: 61  QQQHQ-----HSASLSLHRTHQLTDLYNSLSASDT------LRRPTSAALSPEDLTETEW 120

Query: 125 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYLLCLSFSFPPG GLPGKA+ K KHVWITGANEI+SKIFSRAILAK
Sbjct: 121 FYLLCLSFSFPPGFGLPGKAYCKKKHVWITGANEIESKIFSRAILAK 150

[Close]
BLAST of Cp4.1LG05g01810 vs. NCBI nr
Match: gi|751361154|gb|AJF46885.1| (bHLH transcription factor MYC1 [Camellia sinensis])

HSP 1 Score: 203.0 bits (515), Expect = 4.2e-49
Identity = 98/167 (58.68%), Postives = 125/167 (74.85%), Query Frame = 1 

Query: 4   KMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQ 63
           +++ +LQ AVQ+V+WTYSL+W+   Q  +LVWGDG+YNG IKT KT+ P           
Sbjct: 8   RLQSMLQTAVQTVQWTYSLFWQLCPQQGILVWGDGYYNGAIKTRKTVQP----------- 67

Query: 64  QQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEW 123
                   +++ A   SLQR+ QLR+LY+SLSA +S+  T   RRP AALSPEDLTESEW
Sbjct: 68  --------MEVSAEEASLQRSQQLRELYDSLSAGESNQQT---RRPCAALSPEDLTESEW 127

Query: 124 FYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 171
           FYL+C+SFSFPPG+GLPGKA+AK +HVW+TGANE+DSK+FSRAILAK
Sbjct: 128 FYLMCVSFSFPPGVGLPGKAYAKRQHVWLTGANEVDSKVFSRAILAK 152

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g01810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BHLHM_PEA1.3e-5058.08Truncated basic helix-loop-helix protein A OS=Pisum sativum GN=BHLH PE=4 SV=1[more]
BHLHW_PEA1.3e-5058.08Basic helix-loop-helix protein A OS=Pisum sativum GN=BHLH PE=3 SV=1[more]
TT8_ARATH2.5e-4654.49Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2[more]
GL3_ARATH1.5e-3042.01Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1 SV=1[more]
EGL1_ARATH4.4e-3042.77Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1 SV=1[more]
BLAST of Cp4.1LG05g01810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0K0M5B0_CAMSI2.9e-4958.68BHLH transcription factor MYC1 OS=Camellia sinensis PE=2 SV=1[more]
A0A0S3SS24_PHAAN6.5e-4959.28Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G236400 PE=... [more]
A0A0L9TWZ8_PHAAN6.5e-4959.28Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g116600 PE=4 SV=1[more]
A0A067JCD9_JATCU1.1e-4858.08Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21943 PE=4 SV=1[more]
A0A075LVT4_9ROSI1.5e-4858.08Basic helix-loop-helix transcription factor OS=Populus tremula x Populus tremulo... [more]
BLAST of Cp4.1LG05g01810 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G09820.11.4e-4754.49 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G41315.18.5e-3242.01 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G63650.12.5e-3142.77 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G00480.21.0e-2135.06 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G32640.11.3e-1127.63 Basic helix-loop-helix (bHLH) DNA-binding family protein[more]
BLAST of Cp4.1LG05g01810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097110|ref|XP_008449448.1|1.9e-6278.44PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis melo][more]
gi|659097112|ref|XP_008449449.1|1.9e-6278.44PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis melo][more]
gi|778716191|ref|XP_011657519.1|3.3e-6277.84PREDICTED: basic helix-loop-helix protein A isoform X2 [Cucumis sativus][more]
gi|778716187|ref|XP_004140222.2|3.3e-6277.84PREDICTED: basic helix-loop-helix protein A isoform X1 [Cucumis sativus][more]
gi|751361154|gb|AJF46885.1|4.2e-4958.68bHLH transcription factor MYC1 [Camellia sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025610MYC/MYB_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0044238 primary metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g01810.1Cp4.1LG05g01810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025610Transcription factor MYC/MYB N-terminalPFAMPF14215bHLH-MYC_Ncoord: 9..170
score: 2.3
NoneNo IPR availablePANTHERPTHR11514MYCcoord: 9..51
score: 7.5E-48coord: 71..170
score: 7.5
NoneNo IPR availablePANTHERPTHR11514:SF37TRANSCRIPTION FACTOR EGL1-RELATEDcoord: 9..51
score: 7.5E-48coord: 71..170
score: 7.5