MELO3C030936.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030936.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr04 : 25198075 .. 25199613 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAATACAAGCATAAAATATTCTTCCCAAACACTTATACATAACCCTAGCTTTAGCTCCCTCTATAATATAAGGCAGTATACATGAGAGCTATGGCTATGGCTATGGCTATACCCTAGCGAAGAAAAAGGGTTGGTGAATTAGGGTTGTGCCCAGCTAATATCATATCATATCATAAAAATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCAATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCAACAACAACTACTTTTGGGTGAGATTATACTTATTTAAAACCTCTTTATTTCCTTTTCATTTTTGTTTTTTTATTTATTGGTTTCTAAGTTTTGTTTACAACTACACGATTTCAAATGGTTTAAAATCGTGCTGGTTGTCTCTTTGTCCGAAAATATATAGAAAGAGTACTCTTCTTTATCTCCATGGAAGATTAATATTTTGTTTTGATTAAAATATCATTTTGATCAAATATTTTGAATCTTTTAATATATTTATAATAATTTTGGTTTATTAACTTTTAAAATTATTAATATTTAATATGAGTTTATTATTGTTTATTAAAATAAAGGGGGGGATTTTGTTGATATTTTCTTTATAAATCAACCGAATATATTTACATACTGTGTCTTTTCTATTATAGTTATTATTTAACTAATTTTGATAAGATTTTTAGAAAATAAAATGATCAAAATCCGATAATTAAAAATACATTATGTCATGTAACTATACAAAAATAACATATGGAATTTGATATTATTTTTTATTTCATCATATATGTCTTGACTTTGATACTAACTAACAATTTTTTTGTTGAGGTTTAAAATTAAGGTTCCATTCAATAACTATTTTGTTTATTTATTTTTTCAGAAAGTTCTGCAAAATTAAAATAAAATTATTTCAAACATTTACTTTTGTTATTTAAGATTATGAAATCCGTGAATGATGAGGAATCCTAATAACTAATTAATTAATGGATTAATTTGTTCCTTAATTATTTAATTTTTTCTTTTTTTTCTTTTGGGTTTGGAGTGAAAGGAGGCCGTGGCAAAGAAGAGAATAATAAGACGGCGGAGAGTTGGACTGTTTTAAAGGCTAAAGGGGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAATAACATAATGATAATTACCACTTTCCTCCTCTCTTCCTTTTTATACTTGTTTTAAATTTTCTTTTTTTCGTTCATTTCTATGTGGAATAATATCAAAACCTATTTATATATATATACACACATACATCTTTTTGTTTGAGTAAATTTTTGTAATCCCAAACTACCTCAATTTATCAATATACACGTATATATATACATATATGGATCTTGTTTTAGTTATACAACAATTGGAGTAATAAGATACGAAAAACACATAACAAATTTCATGTTA

mRNA sequence

CTAAAATACAAGCATAAAATATTCTTCCCAAACACTTATACATAACCCTAGCTTTAGCTCCCTCTATAATATAAGGCAGTATACATGAGAGCTATGGCTATGGCTATGGCTATACCCTAGCGAAGAAAAAGGGTTGGTGAATTAGGGTTGTGCCCAGCTAATATCATATCATATCATAAAAATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCAATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCAACAACAACTACTTTTGGTGAAAGGAGGCCGTGGCAAAGAAGAGAATAATAAGACGGCGGAGAGTTGGACTGTTTTAAAGGCTAAAGGGGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAATAACATAATGATAATTACCACTTTCCTCCTCTCTTCCTTTTTATACTTGTTTTAAATTTTCTTTTTTTCGTTCATTTCTATGTGGAATAATATCAAAACCTATTTATATATATATACACACATACATCTTTTTGTTTGAGTAAATTTTTGTAATCCCAAACTACCTCAATTTATCAATATACACGTATATATATACATATATGGATCTTGTTTTAGTTATACAACAATTGGAGTAATAAGATACGAAAAACACATAACAAATTTCATGTTA

Coding sequence (CDS)

ATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCAATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCAACAACAACTACTTTTGGTGAAAGGAGGCCGTGGCAAAGAAGAGAATAATAAGACGGCGGAGAGTTGGACTGTTTTAAAGGCTAAAGGGGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAATAACATAATGATAATTACCACTTTCCTCCTCTCTTCCTTTTTATACTTGTTTTAA

Protein sequence

MGVYACLLISLLLILQTVWISSLSNASNNSFQYESLSNPPLQTHHQQQLLLVKGGRGKEENNKTAESWTVLKAKGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIMIITTFLLSSFLYLF
Homology
[Close]
BLAST of MELO3C030936.2 vs. NCBI nr
Match: KGN58649.1 (hypothetical protein Csa_3G710765 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 9.2e-10
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MGVYACLLISLLLILQTVWISSLSNASNNSFQYESLSNP 40
          MGVYACLLISLLLILQTVWISSLSNASNNSF YESLSNP
Sbjct: 1  MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNP 39

[Close]
BLAST of MELO3C030936.2 vs. TrEMBL
Match: tr|A0A0A0LCI5|A0A0A0LCI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710765 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-10
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MGVYACLLISLLLILQTVWISSLSNASNNSFQYESLSNP 40
          MGVYACLLISLLLILQTVWISSLSNASNNSF YESLSNP
Sbjct: 1  MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNP 39

The following BLAST results are available for this feature:
BLAST of MELO3C030936.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58649.19.2e-1097.44hypothetical protein Csa_3G710765 [Cucumis sativus][more]
BLAST of MELO3C030936.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030936.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030936.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LCI5|A0A0A0LCI5_CUCSA6.1e-1097.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710765 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030936.2.1MELO3C030936.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C030936.2CSPI03G30260Wild cucumber (PI 183967)cpimedB193
MELO3C030936.2Cucsa.177330Cucumber (Gy14) v1cgymedB312
MELO3C030936.2Bhi11G001244Wax gourdmedwgoB375
MELO3C030936.2CsaV3_3G032710Cucumber (Chinese Long) v3cucmedB198
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030936.2Cucumber (Gy14) v1cgymedB311
MELO3C030936.2Cucurbita maxima (Rimu)cmamedB257
MELO3C030936.2Cucurbita maxima (Rimu)cmamedB489
MELO3C030936.2Cucurbita moschata (Rifu)cmomedB239
MELO3C030936.2Cucurbita moschata (Rifu)cmomedB374
MELO3C030936.2Cucurbita moschata (Rifu)cmomedB473
MELO3C030936.2Cucurbita moschata (Rifu)cmomedB476
MELO3C030936.2Cucurbita pepo (Zucchini)cpemedB615
MELO3C030936.2Cucurbita pepo (Zucchini)cpemedB673
MELO3C030936.2Cucumber (Chinese Long) v2cumedB193
MELO3C030936.2Bottle gourd (USVL1VR-Ls)lsimedB273
MELO3C030936.2Watermelon (Charleston Gray)medwcgB309
MELO3C030936.2Watermelon (97103) v1medwmB344
MELO3C030936.2Silver-seed gourdcarmedB0211
MELO3C030936.2Silver-seed gourdcarmedB0822
MELO3C030936.2Watermelon (97103) v2medwmbB305
MELO3C030936.2Cucumber (Gy14) v2cgybmedB173