MELO3C030284.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030284.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr03 : 24833839 .. 24834374 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTCTTGGAGTCCAAGCCAAAAGAGTTCTTTAAAGTTCAACCTATTCTAATATTTATTTACATAATTCTATATATTTCTCTCTTATCCTTATCTAAAAGAATTCTCTAGAATTCTTTATTCTAAAAAATCGCTAAGATATTTTTAGGTTTCTTCTTTAGTTTACATAATTCTAGAATTTTAATATACTCATTTAATATCTCTAGAAGATTCTAGTTAGTGTTGCTATATACTTTAACATAAACATACATCTATTTTTATTCAGGTTCTAACGTCATTACGAACACTGAATAGCATTAAGGACCCTTCATCAGCTGGTCGTGCATTTCCCCAACGCATTGAAAGGAAACCTAAATCCGACGACAGCTTTATTGTCAAGAAGATCAAAAGCATTCGGGCAAAACTGTGTCGTTTTTTTTGTTTGTGCTAAATGACATTTTGCCATTCTTTCCTTGGTTCTTTTCAAGTTTAGAGCATTAGTATATGATGTAGTTTGTTATAAATTAACTTAATATATTCTTCTGTTTTAGCAA

mRNA sequence

ATGAATTTCTTGGAGTCCAAGCCAAAAGAGTTCTTTAAAGTTCTAACGTCATTACGAACACTGAATAGCATTAAGGACCCTTCATCAGCTGGTCGTGCATTTCCCCAACGCATTGAAAGGAAACCTAAATCCGACGACAGCTTTATTGTCAAGAAGATCAAAAGCATTCGGGCAAAACTGTGTCGTTTTTTTTGTTTGTGCTAAATGACATTTTGCCATTCTTTCCTTGGTTCTTTTCAAGTTTAGAGCATTAGTATATGATGTAGTTTGTTATAAATTAACTTAATATATTCTTCTGTTTTAGCAA

Coding sequence (CDS)

ATGAATTTCTTGGAGTCCAAGCCAAAAGAGTTCTTTAAAGTTCTAACGTCATTACGAACACTGAATAGCATTAAGGACCCTTCATCAGCTGGTCGTGCATTTCCCCAACGCATTGAAAGGAAACCTAAATCCGACGACAGCTTTATTGTCAAGAAGATCAAAAGCATTCGGGCAAAACTGTGTCGTTTTTTTTGTTTGTGCTAA

Protein sequence

MNFLESKPKEFFKVLTSLRTLNSIKDPSSAGRAFPQRIERKPKSDDSFIVKKIKSIRAKLCRFFCLC
Homology
[Close]
BLAST of MELO3C030284.2 vs. NCBI nr
Match: KGN47559.1 (hypothetical protein Csa_6G361210 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 15  LTSLRTLNSIKDPSSAGRAFPQRIERKPKSDDSFIVKKIKSIRAKLCRF-FCLC 68
           +   +T NS K+ S AGRA P+R +RK KSD+SFIVKKI+S RAKLCRF F +C
Sbjct: 52  IKGFKTYNSRKNYSPAGRALPERPKRKHKSDNSFIVKKIRSTRAKLCRFLFNIC 105

[Close]
BLAST of MELO3C030284.2 vs. TrEMBL
Match: tr|A0A0A0KFH5|A0A0A0KFH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361210 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-06
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 15  LTSLRTLNSIKDPSSAGRAFPQRIERKPKSDDSFIVKKIKSIRAKLCRF-FCLC 68
           +   +T NS K+ S AGRA P+R +RK KSD+SFIVKKI+S RAKLCRF F +C
Sbjct: 52  IKGFKTYNSRKNYSPAGRALPERPKRKHKSDNSFIVKKIRSTRAKLCRFLFNIC 105

The following BLAST results are available for this feature:
BLAST of MELO3C030284.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47559.12.0e-0661.11hypothetical protein Csa_6G361210 [Cucumis sativus][more]
BLAST of MELO3C030284.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030284.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030284.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFH5|A0A0A0KFH5_CUCSA1.3e-0661.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361210 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030284.2.1MELO3C030284.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C030284.2Csa6G361210Cucumber (Chinese Long) v2cumedB447
MELO3C030284.2CsGy6G018270Cucumber (Gy14) v2cgybmedB405
MELO3C030284.2CsaV3_6G031730Cucumber (Chinese Long) v3cucmedB465
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030284.2Cucurbita maxima (Rimu)cmamedB179
MELO3C030284.2Cucurbita maxima (Rimu)cmamedB819
MELO3C030284.2Cucurbita moschata (Rifu)cmomedB169
MELO3C030284.2Cucurbita moschata (Rifu)cmomedB814
MELO3C030284.2Cucurbita pepo (Zucchini)cpemedB113
MELO3C030284.2Cucurbita pepo (Zucchini)cpemedB899
MELO3C030284.2Wild cucumber (PI 183967)cpimedB456
MELO3C030284.2Bottle gourd (USVL1VR-Ls)lsimedB490
MELO3C030284.2Watermelon (Charleston Gray)medwcgB289
MELO3C030284.2Watermelon (97103) v1medwmB296
MELO3C030284.2Silver-seed gourdcarmedB0139
MELO3C030284.2Silver-seed gourdcarmedB0221
MELO3C030284.2Watermelon (97103) v2medwmbB290
MELO3C030284.2Wax gourdmedwgoB341