MELO3C029649.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACCCTGAGAAGAAGAAGAAGTTGAAGAAAAGGTTTCTTTCCCATTTCTTATTTATCTTTGATTATATTGCTTATGTCTACGTCGATACGTGTATGAAGGACGCATTTTTTTGGCAGTTTGGTATAGTGTTATTGCTATTGTTTTGTTTTATTTTAATTGATTGTTTGGTCCTACTCCTATCCAATTGAAGGGAATTTTAGTTTTTTTTTAATTCATTGTCATTTCTTGTAGAATTTTTTCCGCTCCACAGTTGGATTGTTCTAGAAGTTGAATTCTCCTAGTTTTAATTGTTTATATTCCAGGGAAATGTGCCTTGAAACTATTCTACTGGGATTTATTTCTGAAAGAACTTGCGAATAGATTCATTCGTAGTCTAACGAATAAATAATAATTCTCAAGAACTCCCAAAAAGCATTAATTCTTATTGTGCCAAAAAAACATCTATTAATTGTTTGTTAGTTGAAAAGTTTCATTATCTCATTCAAAACACTTGGAACTTCTTTTTGTAGTTTTGGACTTCTTCAATCACTTTTCAGCTACGACTCAAGTCATTTTCGGTAAGTTTTGTGTTAAGACTTTGTTTAGATCAATCATTTAGACATTTCACATTCACTAGAAGAAATATGGCCTATGTGTTTTGGAATCTACATGAACCGATCTGAAACCAGGTACGTTTTTGTGAACTCGTCAATTCAAGAACTTAGCTATGGTTTGGTTCTTAAGAATTCGTTTAGTTAAGACTTTGAGGGATGAGTTTTGTTGATGTATTGAAGCAGGAGAAATTATATGCGGTAAGGTAGGCGTCTTGTATTATAATATAGAAATGATAATATAGTAAGCGTTTATGGATCATGCGTGCGTTTTATGTAGGCATTTTGTATTTATGTGTTGCCTGTAATATGTTTTGTTTTGTTTAATACATATGTACCTTAATTTTTTTGACAGAAGGAGATTTAGCTAAGGCCCTTGCAGTAAGTTTTCATTTTTCACACTTATGAATTGACATTGGTTTCTATCTCTCTCTCCTTGGATGGCTCATTAACTTTTTTTTTTGCTTTCCATTTTCAAACTCTGTTTGTAATTGTTTTATATTGTTCACTTTTATGGTTTTTGATTATCAATTGCATTCCACGATCGTTCGCTCCTGTTCTATAATTTGTACATTTGAGTCATTATTAAGAAAACCTTTCGCTAAAGAGTTTCATAGGTCATTGATATGGTTGAGCCGAACTACAAAAAAATATAAATGAACTGAAGTAAATGTATCAATAGATAAGATTGCTTTTGATATTTGAACAACATTCTTAGAAATCTATTGATATGTTTTTCAGTGCATTATCATTGATTGTTTAACAAGGCTGATCGATCTTTGTTGTCGTATGGTGCTTGGTCTTGAATATATTCTTTTTCAAGAAGTTGTTCAATGGAAGGTTTGAGAAAGGTGAAAAATTAATTATGGAAGATCTATGCCTTAGTAAACTTTTAAGTTTTGTAATATGTATTTTCTATTTGATTTAGGCTGAGGAAATGAGTGCTTTTGTCTTACTTAAAAGAGGTATGAAGGTGGCTGAGACATTGCCAATCGAAATTACTGGACTGTAAGTTTTGCTAACATAATTTTATTTTACTATTTATGATTGGTATATTTTGCCTTGGATTCTGCTATTCAATACAATTTATTGTAATTAGTTTTTGTTGTATGCTAGCAAGATATATCATTTGAAGTGGTTAGAAAATCTTTGGAGACTTATTATATAATATTAGTCCACACTATTCAGTTTACAAGACTATCGAGTAACTCTTTAGGAAATGAGAAAAATTTTAATGACTATCATTCTCCATGCATTTCTCATTTGAGTTTATTTTATTTAAGTATTTAATTGAAGATGTTCTTTAATTGGAGATTGTTTTATAGTTAACCACTTGAATTAAGGAAGTTTGTTTAATGTTGTGGCGATCTACAAATTTATTGTTATAGTATGTAATTTCATGCGGTGTTTGTTATAATTGTTGATGTCTGTTTCTATCCCCCTTCCCTCCATCTGTCCCATCTCGCCTATGTGTTTATGAATGAATGTTGCATCGCCTGTTCTTTTTGGATTTTGTTCTCTGGATCTTAGCTAGCTTTCCTTACCATTGTTTGCAGATGGGCTTTCGAGTGTTATTGAAATAAAAGGCCAACAGGTTCGAGTGGAGCTTGCATCTCAAATGAATGTTGTCAGAGGCATGTTTTGATTTTGAGCAACAGTTTATTTGATTTAGTGACATTACTTGCATACAGTTTTTTAAGAATATCTGAGAACTGTTAAAGTCTCAAATGGAAGTTAAACATGTGGTATTAACTCTATAATGCTTGTTTTATTTGAGCAGTTGACCACAATTTTATCTCGGATAATATGGCCATTTCAACTCCTCATCGGTAAATATAAGATATAATACATAACTAATCTCCTTTTGTTTGTTTGTTATTTCAAGGTTCTAATGTTTGCTATGTACCAGTGATGCATCTAGATATGGTATGAGAAGTGAAACTTCAATGCATCCTTCTCGAACTCTCCTACATCCAAACATGACGCCAATGAGAGATACTCGAACTCTCGTACATCCAAACATGACGCCAGTGAGAGATATTTGAAGTTAGTTCTCTTTCCATGTTTTTTTTTTATTCTAAATTTCTAATAGTACTATGAGAGTTATTCATATTTTACTATCTGTTTTTGTAGCAACACCAATTCATGATGACATGAGAACACCTATGCGAGATCGAGTTTGGAATCCATATGCACCCATGAGTCTGTTAAGGTAAATTTCATGTTAACTAGTGCACTTGAGATATTAATTAAGATAATGTGGATAACATTGTAGAATATATGTGATGTAGAGGCTCCATAAATTATTGTTATTATAACTATTTTCTATAATTTACTTTTTTGATATTGTCTTACAGTTAGAATCGAGGAACATTTAAATTCAAAAATGACAATTGATAAATTTAAATAGCTTTATGATAAGCTTGAAAGTATTAATGCTATAGCAGATAACTAATGAAGATTTATAGTTTTTAGTTTATTTTTTGAAATAATTCTTGAATGTATATTTGTTGTTTTGTTCTTTCTCCATAATTCTTCTCTTGGTTAGTTTCGTTTTGGAAAATACTTTCATGTTGATTCTTTTATGTGGAATCTGGTTTTTGTGGTTTACATACCCAAGCGACCTTTATGATCTATGTTTGAACCATTATTGGTTGTGATTGTTGAAGACGTAATTTTTCGACTATTGGCTTCCTTAAAGCATACAAGAGTTCATGGACATTATGAAGTTTGCTGTCAAGAAAATACTGCAAAATGTTTTCACAAGGGGTGAGATATAAATTCTGGGTTTTTTTTTTTGTTAAAATAAATTGAGTTACTCATTAGGTTGAATTATTTGCTTGTCTTTACTGTTAGCTTTGATGATCTATCTTTACTGTTAGCTTTGATGATCTATCTTTACTGTGGAAGACTCAACTTAATAACCAATGGCTTCAAAGTTCCATCATCTTTCAAAAATAGCAATGTTCTTGTGGCATATGCTTTTGTTATGCAATTCTTATCTTGATGTGTAGAGTCATACTCTAACATTTCATTTTGTTTTCTGACTAGGTTTTGCAAGAATCTATTGGAGCAGTGAAGCCATATTTACGGCAATTGATTGATTTATAG ATGGAAGACCCTGAGAAGAAGAAGAAGTTGAAGAAAAGGTTTCTTTCCCATTTCTTATTTATCTTTGATTATATTGCTTATGTCTACGTCGATACGTGTATGAAGGACGCATTTTTTTGGCAGTTTGGTATATTTTGGACTTCTTCAATCACTTTTCAGCTACGACTCAAGTCATTTTCGATCAATCATTTAGACATTTCACATTCACTAGAAGAAATATGGCCTATGTGTTTTGGAATCTACATGAACCGATCTGAAACCAGGTACGTTTTTGTGAACTCGTCAATTCAAGAACTTAGCTATGAAGGAGATTTAGCTAAGGCCCTTGCATGCATTATCATTGATTGTTTAACAAGGCTGATCGATCTTTGTTGTCGTATGGTGCTTGGTCTTGAATATATTCTTTTTCAAGAAGTTGTTCAATGGAAGGCTGAGGAAATGAGTGCTTTTGTCTTACTTAAAAGAGGTATGAAGGTGGCTGAGACATTGCCAATCGAAATTACTGGACTATGTTCTTTAATTGGAGATTGTTTTATATTGACCACAATTTTATCTCGGATAATATGGCCATTTCAACTCCTCATCGCAACACCAATTCATGATGACATGAGAACACCTATGCGAGATCGAGTTTGGAATCCATATGCACCCATGAGTCTGTTAAGCTTTGATGATCTATCTTTACTGTTAGCTTTGATGATCTATCTTTACTGTGGAAGACTCAACTTAATAACCAATGGCTTCAAAGTTCCATCATCTTTCAAAAATAGCAATGTTTTGCAAGAATCTATTGGAGCAGTGAAGCCATATTTACGGCAATTGATTGATTTATAG ATGGAAGACCCTGAGAAGAAGAAGAAGTTGAAGAAAAGGTTTCTTTCCCATTTCTTATTTATCTTTGATTATATTGCTTATGTCTACGTCGATACGTGTATGAAGGACGCATTTTTTTGGCAGTTTGGTATATTTTGGACTTCTTCAATCACTTTTCAGCTACGACTCAAGTCATTTTCGATCAATCATTTAGACATTTCACATTCACTAGAAGAAATATGGCCTATGTGTTTTGGAATCTACATGAACCGATCTGAAACCAGGTACGTTTTTGTGAACTCGTCAATTCAAGAACTTAGCTATGAAGGAGATTTAGCTAAGGCCCTTGCATGCATTATCATTGATTGTTTAACAAGGCTGATCGATCTTTGTTGTCGTATGGTGCTTGGTCTTGAATATATTCTTTTTCAAGAAGTTGTTCAATGGAAGGCTGAGGAAATGAGTGCTTTTGTCTTACTTAAAAGAGGTATGAAGGTGGCTGAGACATTGCCAATCGAAATTACTGGACTATGTTCTTTAATTGGAGATTGTTTTATATTGACCACAATTTTATCTCGGATAATATGGCCATTTCAACTCCTCATCGCAACACCAATTCATGATGACATGAGAACACCTATGCGAGATCGAGTTTGGAATCCATATGCACCCATGAGTCTGTTAAGCTTTGATGATCTATCTTTACTGTTAGCTTTGATGATCTATCTTTACTGTGGAAGACTCAACTTAATAACCAATGGCTTCAAAGTTCCATCATCTTTCAAAAATAGCAATGTTTTGCAAGAATCTATTGGAGCAGTGAAGCCATATTTACGGCAATTGATTGATTTATAG MEDPEKKKKLKKRFLSHFLFIFDYIAYVYVDTCMKDAFFWQFGIFWTSSITFQLRLKSFSINHLDISHSLEEIWPMCFGIYMNRSETRYVFVNSSIQELSYEGDLAKALACIIIDCLTRLIDLCCRMVLGLEYILFQEVVQWKAEEMSAFVLLKRGMKVAETLPIEITGLCSLIGDCFILTTILSRIIWPFQLLIATPIHDDMRTPMRDRVWNPYAPMSLLSFDDLSLLLALMIYLYCGRLNLITNGFKVPSSFKNSNVLQESIGAVKPYLRQLIDL
BLAST of MELO3C029649.2 vs. NCBI nr
Match: ONH89815.1 (hypothetical protein PRUPE_8G018000 [Prunus persica]) HSP 1 Score: 55.5 bits (132), Expect = 3.4e-04 Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of MELO3C029649.2 vs. NCBI nr
Match: XP_002305464.2 (putative transcription elongation factor SPT5 homolog 1 [Populus trichocarpa] >XP_024454835.1 putative transcription elongation factor SPT5 homolog 1 [Populus trichocarpa] >PNT41570.1 hypothetical protein POPTR_004G162500v3 [Populus trichocarpa]) HSP 1 Score: 54.7 bits (130), Expect = 5.9e-04 Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 0
BLAST of MELO3C029649.2 vs. NCBI nr
Match: XP_002265283.2 (PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Vitis vinifera] >CBI19960.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 54.7 bits (130), Expect = 5.9e-04 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MELO3C029649.2 vs. NCBI nr
Match: KJB59371.1 (hypothetical protein B456_009G252200 [Gossypium raimondii] >KJB59373.1 hypothetical protein B456_009G252200 [Gossypium raimondii]) HSP 1 Score: 54.7 bits (130), Expect = 5.9e-04 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MELO3C029649.2 vs. NCBI nr
Match: KJB59372.1 (hypothetical protein B456_009G252200 [Gossypium raimondii]) HSP 1 Score: 54.7 bits (130), Expect = 5.9e-04 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MELO3C029649.2 vs. TrEMBL
Match: tr|A0A251MRD7|A0A251MRD7_PRUPE (Transcription elongation factor SPT5 OS=Prunus persica OX=3760 GN=PRUPE_8G018000 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.3e-04 Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of MELO3C029649.2 vs. TrEMBL
Match: tr|A0A1U8K7B9|A0A1U8K7B9_GOSHI (Transcription elongation factor SPT5 OS=Gossypium hirsutum OX=3635 GN=LOC107914125 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.9e-04 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MELO3C029649.2 vs. TrEMBL
Match: tr|A0A0D2TV81|A0A0D2TV81_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G252200 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.9e-04 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MELO3C029649.2 vs. TrEMBL
Match: tr|E0CQN1|E0CQN1_VITVI (Transcription elongation factor SPT5 OS=Vitis vinifera OX=29760 GN=VIT_18s0001g15400 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.9e-04 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of MELO3C029649.2 vs. TrEMBL
Match: tr|A5BMK7|A5BMK7_VITVI (Transcription elongation factor SPT5 OS=Vitis vinifera OX=29760 GN=VITISV_043874 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.9e-04 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |