MELO3C029057.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C029057.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionImportin subunit alpha
Locationchr01 : 18403449 .. 18404931 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCATAATCTAATAGGTGAGTTGAGTGGTGGAGGATCTGCTATGCTTGCAGCGAGGGGGAAAGGTCTCTTGTCTTGGATTGAAGATGACAGTTTAATTGTGGATGAAACAGCCACTGCAATTCCTGAGGTAATCAGTTGGTTATTAGTATTTCTTTGTGTTGAGAATAATATAAAGTAGTACTTTTTGATTAGTGAAAACCATTTTTGATATGTTTTGTAGATAGTTTCATTTTTTTTGTGCTATTATAACTATTTCTCTACTTTTTTTGTACTGACTTTGTATTCTTTCATTTGTTCTGAAAGTAGTTATTTCTATTAAAAAATGCTGGGAACCTAAGCATAAAATCTTAAATATGAATCATACTGTGTTCAAGAAAAAATAATTAGAATGTTTATTTATTTTTTATTTTTTTGGATAACACCACTATTACTTGATTTGCTTAATAACATCATTTCCTATTCTTGCACAGGCTGTGTGGGCCTTAGGTAATGTTGCTGGTGACTCTCCAAGTTGTAGGGATCTTGTTCATAGCCATTGTGCACTAGTGTCGTTACTTGGTCAACTAAATGAGCACTCAAAATTATCCATGCTGAGAAATGCAACATGGACTTTATCTAATTTCTGTCGTGGGAAGCTCCCAACTCCTTTTGATCAGGTTTATTTCAGTTAACCTTTCGAATTCAAGATCCAACTTTGAGTTTCTTCTAATATTTAGAACTGTTTTGGTGGTCACTTTATGTTTGGTTCTTTTGTTTGGCAATGAAAAGACTATTATGGTGGTGACTATTTATCAAAACTTGACTTGGTTTTTGAAAAACATGAATAGAAAGTTGATAACAAAGCAAGAAATGTAGATGTGGTCACTTATTAGATGCTTGGATTTTTTTTATGCACTTATATTTTTCAAGTAACTAAAGGAGAATTTGTTCATGGGAAGTTAACAAAATCTTGCCTTTGTTTGGAACTATCATATCATCCTCATCTTTCGTAACTAACTGTGATTATGATATTGTTGGATTAAAGAATTACTTGAATGCTCAGTATTTTGGTGAGATTGGTATTGGTACTCCCCCTCAAAAGTTTAGTAATCAAATGTGAATATTTCTACTAGCAACTAGGTCATAACATTATTATTTATCAATTCAACCATCTTGATGTATTTTACAGGGAGCTATCACTAAACAAATGACTGCAATAGAAGAAATAGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTGTGACAAGATCTTGAAGATGGTCATTTGTGAAGCGTTCTAGTTTGTTATTAGTGCAGTTTTAGTTATTGCTTTCTCAATATATTCTTTTTCTTTCTTTCTTTCTTTTTTTCCAAAGGATGATCAGTGTAATAATTAAGCTTCATAATTTCTTTGTGTTTGGAACCAAGTTGTATATAAATGTACAAATTATTAAGATTTCATTTTGTATATGTACAAGTAAACTATTTCATTTTTAA

mRNA sequence

AAGCATAATCTAATAGGTGAGTTGAGTGGTGGAGGATCTGCTATGCTTGCAGCGAGGGGGAAAGGTCTCTTGTCTTGGATTGAAGATGACAGTTTAATTGTGGATGAAACAGCCACTGCAATTCCTGAGGCTGTGTGGGCCTTAGGTAATGTTGCTGGTGACTCTCCAAGTTGTAGGGATCTTGTTCATAGCCATTGTGCACTAGTGTCGTTACTTGGTCAACTAAATGAGCACTCAAAATTATCCATGCTGAGAAATGCAACATGGACTTTATCTAATTTCTGTCGTGGGAAGCTCCCAACTCCTTTTGATCAGGGAGCTATCACTAAACAAATGACTGCAATAGAAGAAATAGTTGCAAGTGAGTACAATTAGCCAGACCCTCATCTTTGTGACAAGATCTTGAAGATGGTCATTTGTGAAGCGTTCTAGTTTGTTATTAGTGCAGTTTTAGTTATTGCTTTCTCAATATATTCTTTTTCTTTCTTTCTTTCTTTTTTTCCAAAGGATGATCAGTGTAATAATTAAGCTTCATAATTTCTTTGTGTTTGGAACCAAGTTGTATATAAATGTACAAATTATTAAGATTTCATTTTGTATATGTACAAGTAAACTATTTCATTTTTAA

Coding sequence (CDS)

ATGCTTGCAGCGAGGGGGAAAGGTCTCTTGTCTTGGATTGAAGATGACAGTTTAATTGTGGATGAAACAGCCACTGCAATTCCTGAGGCTGTGTGGGCCTTAGGTAATGTTGCTGGTGACTCTCCAAGTTGTAGGGATCTTGTTCATAGCCATTGTGCACTAGTGTCGTTACTTGGTCAACTAAATGAGCACTCAAAATTATCCATGCTGAGAAATGCAACATGGACTTTATCTAATTTCTGTCGTGGGAAGCTCCCAACTCCTTTTGATCAGGGAGCTATCACTAAACAAATGACTGCAATAGAAGAAATAGTTGCAAGTGAGTACAATTAG

Protein sequence

MLAARGKGLLSWIEDDSLIVDETATAIPEAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTPFDQGAITKQMTAIEEIVASEYN
Homology
[Close]
BLAST of MELO3C029057.2 vs. NCBI nr
Match: KHG26190.1 (Importin subunit alpha-1 -like protein [Gossypium arboreum])

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 179 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 238

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 239 FEQ--VTPALPALERLVHS 255

[Close]
BLAST of MELO3C029057.2 vs. NCBI nr
Match: KJB12652.1 (hypothetical protein B456_002G029800, partial [Gossypium raimondii])

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 233 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 292

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 293 FEQ--VTPALPALERLVHS 309

[Close]
BLAST of MELO3C029057.2 vs. NCBI nr
Match: XP_012453286.1 (PREDICTED: importin subunit alpha-2-like isoform X2 [Gossypium raimondii] >XP_017642736.1 PREDICTED: importin subunit alpha-2-like isoform X2 [Gossypium arboreum] >KJB12653.1 hypothetical protein B456_002G029800 [Gossypium raimondii] >KJB12654.1 hypothetical protein B456_002G029800 [Gossypium raimondii])

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 177 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 236

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 237 FEQ--VTPALPALERLVHS 253

[Close]
BLAST of MELO3C029057.2 vs. NCBI nr
Match: XP_012453283.1 (PREDICTED: importin subunit alpha-2-like isoform X1 [Gossypium raimondii] >XP_017642734.1 PREDICTED: importin subunit alpha-2-like isoform X1 [Gossypium arboreum] >XP_017642735.1 PREDICTED: importin subunit alpha-2-like isoform X1 [Gossypium arboreum] >KJB12655.1 hypothetical protein B456_002G029800 [Gossypium raimondii])

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 177 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 236

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 237 FEQ--VTPALPALERLVHS 253

[Close]
BLAST of MELO3C029057.2 vs. NCBI nr
Match: XP_016724293.1 (PREDICTED: importin subunit alpha-2-like isoform X1 [Gossypium hirsutum])

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 177 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 236

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 237 FEQ--VTPALPALERLVHS 253

[Close]
BLAST of MELO3C029057.2 vs. TAIR10
Match: AT4G16143.1 (importin alpha isoform 2)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-24
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 18  LIVDETATAIPEAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTL 77
           L+  ++     +AVWALGNVAGDSP CRDLV    AL+ LL QLNEH+KLSMLRNATWTL
Sbjct: 171 LLASQSDDVREQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTL 230

Query: 78  SNFCRGKLPTPFDQGAITKQMTAIEEIVAS 108
           SNFCRGK   PFDQ  +   + A+E ++ S
Sbjct: 231 SNFCRGKPQPPFDQ--VRPALPALERLIHS 258

[Close]
BLAST of MELO3C029057.2 vs. TAIR10
Match: AT3G06720.1 (importin alpha isoform 1)

HSP 1 Score: 104.0 bits (258), Expect = 6.1e-23
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGNVAGDSP CRDLV    AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK    
Sbjct: 177 QAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPH 236

Query: 89  FDQGAITKQMTAIEEIVASE 109
           FDQ  +   + A+E ++ S+
Sbjct: 237 FDQ--VKPALPALERLIHSD 254

[Close]
BLAST of MELO3C029057.2 vs. TAIR10
Match: AT1G02690.2 (importin alpha isoform 6)

HSP 1 Score: 97.8 bits (242), Expect = 4.3e-21
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGNVAGDSP CRD V S  A++SLL Q +EHSKLSMLRNATWTLSNFCRGK P P
Sbjct: 181 QAVWALGNVAGDSPKCRDHVLSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFCRGK-PQP 240

Query: 89  FDQGAITKQMTAIEEIVAS 108
             +      + A+E ++ S
Sbjct: 241 AFEQQTKAALPALERLLHS 258

[Close]
BLAST of MELO3C029057.2 vs. TAIR10
Match: AT5G49310.1 (importin alpha isoform 5)

HSP 1 Score: 84.7 bits (208), Expect = 3.8e-17
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +A+W LGNVAGDS  CRD V +  A + LL QLN H+ LS+LRNATWTLSNF RGK   P
Sbjct: 175 QAIWGLGNVAGDSIQCRDFVLNSGAFIPLLHQLNNHATLSILRNATWTLSNFFRGKPSPP 234

Query: 89  FD 91
           FD
Sbjct: 235 FD 236

[Close]
BLAST of MELO3C029057.2 vs. TAIR10
Match: AT1G09270.1 (importin alpha isoform 4)

HSP 1 Score: 68.2 bits (165), Expect = 3.7e-12
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 

Query: 57  LLGQLNEHSKLSMLRNATWTLSNFCRGKLPTPFDQ 92
           LL QLNE+SKLSMLRNATWTLSNFCRGK PTPF+Q
Sbjct: 212 LLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFEQ 246

[Close]
BLAST of MELO3C029057.2 vs. Swiss-Prot
Match: sp|F4JL11|IMPA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana OX=3702 GN=IMPA2 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-23
Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 18  LIVDETATAIPEAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTL 77
           L+  ++     +AVWALGNVAGDSP CRDLV    AL+ LL QLNEH+KLSMLRNATWTL
Sbjct: 171 LLASQSDDVREQAVWALGNVAGDSPRCRDLVLGQGALIPLLSQLNEHAKLSMLRNATWTL 230

Query: 78  SNFCRGKLPTPFDQGAITKQMTAIEEIVAS 108
           SNFCRGK   PFDQ  +   + A+E ++ S
Sbjct: 231 SNFCRGKPQPPFDQ--VRPALPALERLIHS 258

[Close]
BLAST of MELO3C029057.2 vs. Swiss-Prot
Match: sp|Q96321|IMPA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=IMPA1 PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGNVAGDSP CRDLV    AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK    
Sbjct: 177 QAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPH 236

Query: 89  FDQGAITKQMTAIEEIVASE 109
           FDQ  +   + A+E ++ S+
Sbjct: 237 FDQ--VKPALPALERLIHSD 254

[Close]
BLAST of MELO3C029057.2 vs. Swiss-Prot
Match: sp|Q9SLX0|IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0155601 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-20
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGNVAGDSP CRDLV +   L  LL QLNEH+KLSMLRNATWTLSNFCRGK    
Sbjct: 183 QAVWALGNVAGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPN 242

Query: 89  FDQGAITKQMTAIEEIVASE 109
           F+Q  +   ++A++ ++ S+
Sbjct: 243 FEQ--VKPALSALQRLIHSQ 260

[Close]
BLAST of MELO3C029057.2 vs. Swiss-Prot
Match: sp|Q9FWY7|IMPA6_ARATH (Importin subunit alpha-6 OS=Arabidopsis thaliana OX=3702 GN=IMPA6 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-19
Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGNVAGDSP CRD V S  A++SLL Q +EHSKLSMLRNATWTLSNFCRGK    
Sbjct: 181 QAVWALGNVAGDSPKCRDHVLSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFCRGKPQPA 240

Query: 89  FDQ 92
           F+Q
Sbjct: 241 FEQ 243

[Close]
BLAST of MELO3C029057.2 vs. Swiss-Prot
Match: sp|Q9FJ09|IMPA5_ARATH (Importin subunit alpha-5 OS=Arabidopsis thaliana OX=3702 GN=IMPA5 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.9e-16
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +A+W LGNVAGDS  CRD V +  A + LL QLN H+ LS+LRNATWTLSNF RGK   P
Sbjct: 175 QAIWGLGNVAGDSIQCRDFVLNSGAFIPLLHQLNNHATLSILRNATWTLSNFFRGKPSPP 234

Query: 89  FD 91
           FD
Sbjct: 235 FD 236

[Close]
BLAST of MELO3C029057.2 vs. TrEMBL
Match: tr|A0A0D2NHI1|A0A0D2NHI1_GOSRA (Importin subunit alpha OS=Gossypium raimondii OX=29730 GN=B456_002G029800 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 177 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 236

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 237 FEQ--VTPALPALERLVHS 253

[Close]
BLAST of MELO3C029057.2 vs. TrEMBL
Match: tr|A0A0B0PMH7|A0A0B0PMH7_GOSAR (Importin subunit alpha OS=Gossypium arboreum OX=29729 GN=F383_09269 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 179 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 238

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 239 FEQ--VTPALPALERLVHS 255

[Close]
BLAST of MELO3C029057.2 vs. TrEMBL
Match: tr|A0A1U8MFE7|A0A1U8MFE7_GOSHI (Importin subunit alpha OS=Gossypium hirsutum OX=3635 GN=LOC107936134 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 177 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 236

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 237 FEQ--VTPALPALERLVHS 253

[Close]
BLAST of MELO3C029057.2 vs. TrEMBL
Match: tr|A0A1U8MFF8|A0A1U8MFF8_GOSHI (Importin subunit alpha OS=Gossypium hirsutum OX=3635 GN=LOC107936134 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 177 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 236

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 237 FEQ--VTPALPALERLVHS 253

[Close]
BLAST of MELO3C029057.2 vs. TrEMBL
Match: tr|A0A0D2QZS7|A0A0D2QZS7_GOSRA (Importin subunit alpha OS=Gossypium raimondii OX=29730 GN=B456_002G029800 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 29  EAVWALGNVAGDSPSCRDLVHSHCALVSLLGQLNEHSKLSMLRNATWTLSNFCRGKLPTP 88
           +AVWALGN+AGDSP CRDLV SH AL+ LL QLNEH+KLSMLRNATWTLSNFCRGK   P
Sbjct: 177 QAVWALGNIAGDSPRCRDLVLSHGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPP 236

Query: 89  FDQGAITKQMTAIEEIVAS 108
           F+Q  +T  + A+E +V S
Sbjct: 237 FEQ--VTPALPALERLVHS 253

The following BLAST results are available for this feature:
BLAST of MELO3C029057.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KHG26190.15.5e-2269.62Importin subunit alpha-1 -like protein [Gossypium arboreum][more]
KJB12652.15.5e-2269.62hypothetical protein B456_002G029800, partial [Gossypium raimondii][more]
XP_012453286.15.5e-2269.62PREDICTED: importin subunit alpha-2-like isoform X2 [Gossypium raimondii] >XP_01... [more]
XP_012453283.15.5e-2269.62PREDICTED: importin subunit alpha-2-like isoform X1 [Gossypium raimondii] >XP_01... [more]
XP_016724293.15.5e-2269.62PREDICTED: importin subunit alpha-2-like isoform X1 [Gossypium hirsutum][more]
BLAST of MELO3C029057.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16143.11.4e-2460.00importin alpha isoform 2[more]
AT3G06720.16.1e-2365.00importin alpha isoform 1[more]
AT1G02690.24.3e-2163.29importin alpha isoform 6[more]
AT5G49310.13.8e-1764.52importin alpha isoform 5[more]
AT1G09270.13.7e-1288.57importin alpha isoform 4[more]
BLAST of MELO3C029057.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4JL11|IMPA2_ARATH2.6e-2360.00Importin subunit alpha-2 OS=Arabidopsis thaliana OX=3702 GN=IMPA2 PE=1 SV=1[more]
sp|Q96321|IMPA1_ARATH1.1e-2165.00Importin subunit alpha-1 OS=Arabidopsis thaliana OX=3702 GN=IMPA1 PE=1 SV=2[more]
sp|Q9SLX0|IMA1B_ORYSJ1.2e-2061.25Importin subunit alpha-1b OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g01556... [more]
sp|Q9FWY7|IMPA6_ARATH1.3e-1974.60Importin subunit alpha-6 OS=Arabidopsis thaliana OX=3702 GN=IMPA6 PE=2 SV=1[more]
sp|Q9FJ09|IMPA5_ARATH6.9e-1664.52Importin subunit alpha-5 OS=Arabidopsis thaliana OX=3702 GN=IMPA5 PE=2 SV=1[more]
BLAST of MELO3C029057.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0D2NHI1|A0A0D2NHI1_GOSRA3.6e-2269.62Importin subunit alpha OS=Gossypium raimondii OX=29730 GN=B456_002G029800 PE=3 S... [more]
tr|A0A0B0PMH7|A0A0B0PMH7_GOSAR3.6e-2269.62Importin subunit alpha OS=Gossypium arboreum OX=29729 GN=F383_09269 PE=3 SV=1[more]
tr|A0A1U8MFE7|A0A1U8MFE7_GOSHI3.6e-2269.62Importin subunit alpha OS=Gossypium hirsutum OX=3635 GN=LOC107936134 PE=3 SV=1[more]
tr|A0A1U8MFF8|A0A1U8MFF8_GOSHI3.6e-2269.62Importin subunit alpha OS=Gossypium hirsutum OX=3635 GN=LOC107936134 PE=3 SV=1[more]
tr|A0A0D2QZS7|A0A0D2QZS7_GOSRA3.6e-2269.62Importin subunit alpha OS=Gossypium raimondii OX=29730 GN=B456_002G029800 PE=3 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR000225Armadillo
IPR011989ARM-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006606 protein import into nucleus
biological_process GO:0015031 protein transport
biological_process GO:0006810 transport
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029057.2.1MELO3C029057.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 15..109
e-value: 7.8E-24
score: 86.0
IPR000225ArmadilloPFAMPF00514Armcoord: 53..82
e-value: 7.9E-5
score: 22.5
NoneNo IPR availablePANTHERPTHR23316:SF53IMPORTIN SUBUNIT ALPHA-3-RELATEDcoord: 29..107
NoneNo IPR availablePANTHERPTHR23316IMPORTIN ALPHAcoord: 29..107
IPR016024Armadillo-type foldSUPERFAMILYSSF48371ARM repeatcoord: 24..94

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C029057.2Silver-seed gourdcarmedB0184
MELO3C029057.2Silver-seed gourdcarmedB0330
MELO3C029057.2Silver-seed gourdcarmedB0888
MELO3C029057.2Silver-seed gourdcarmedB0958
MELO3C029057.2Cucumber (Chinese Long) v3cucmedB099
MELO3C029057.2Cucumber (Chinese Long) v3cucmedB537
MELO3C029057.2Watermelon (97103) v2medwmbB162
MELO3C029057.2Watermelon (97103) v2medwmbB165
MELO3C029057.2Wax gourdmedwgoB223
MELO3C029057.2Wax gourdmedwgoB232
MELO3C029057.2Cucumber (Gy14) v2cgybmedB083
MELO3C029057.2Cucumber (Gy14) v2cgybmedB466
MELO3C029057.2Cucumber (Gy14) v1cgymedB150
MELO3C029057.2Cucumber (Gy14) v1cgymedB609
MELO3C029057.2Cucurbita maxima (Rimu)cmamedB101
MELO3C029057.2Cucurbita maxima (Rimu)cmamedB588
MELO3C029057.2Cucurbita maxima (Rimu)cmamedB643
MELO3C029057.2Cucurbita moschata (Rifu)cmomedB092
MELO3C029057.2Cucurbita moschata (Rifu)cmomedB522
MELO3C029057.2Cucurbita moschata (Rifu)cmomedB579
MELO3C029057.2Cucurbita moschata (Rifu)cmomedB631
MELO3C029057.2Cucurbita pepo (Zucchini)cpemedB262
MELO3C029057.2Cucurbita pepo (Zucchini)cpemedB319
MELO3C029057.2Cucurbita pepo (Zucchini)cpemedB716
MELO3C029057.2Cucurbita pepo (Zucchini)cpemedB816
MELO3C029057.2Cucurbita pepo (Zucchini)cpemedB882
MELO3C029057.2Wild cucumber (PI 183967)cpimedB096
MELO3C029057.2Wild cucumber (PI 183967)cpimedB524
MELO3C029057.2Cucumber (Chinese Long) v2cumedB096
MELO3C029057.2Cucumber (Chinese Long) v2cumedB510
MELO3C029057.2Melon (DHL92) v3.6.1medmedB041
MELO3C029057.2Bottle gourd (USVL1VR-Ls)lsimedB068
MELO3C029057.2Bottle gourd (USVL1VR-Ls)lsimedB102
MELO3C029057.2Watermelon (Charleston Gray)medwcgB186
MELO3C029057.2Watermelon (Charleston Gray)medwcgB191
MELO3C029057.2Watermelon (97103) v1medwmB231
MELO3C029057.2Watermelon (97103) v1medwmB244