MELO3C028665.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C028665.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMyb/SANT-like DNA-binding domain protein
Locationchr01 : 3415820 .. 3418177 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCATGCCCCAGACCTTGTGTGTCACCAGAGTACGAGAATGGATCGAAGATGTTTTGCCATTCTGTGCCACCTACTGAGGACCATTGTTGGACTAACGTCGACGGAAGTCGTCGATGTTGGGGAGATGGTAGTAATGTTCCTCCACATTCTTGCGCACGACATGAAAAGTTGTGTCATTCAACGGGAGTTCATGCGGTCAGGTGAAACAATTTTTCGTTATTTCAACATGGTCTTGTTGGCCGTTATTCGACTTCATGACGAGTTTTTGAAAAAACCACAACCAATGCCTAACTGTTGCACAGATCAAAGATGAAGGTGGTTTGAGGTACACATTTGTCTCGAACTACGTACTTCCAACACAACGACGTTAGTTCTTCTCAATAATTTTTAGTTATGCGTTGCGGAATTGCCTAGGTGCATTAGATGGAATGTACATAAAAGTCAACATTCCAACAAGTGACCGGGCTAGGTATAGAACATGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACACGAAAGAAGATTTCGTTTACATACTTGTCGGTTGGGAAGGATCAGCTGAGGACTCACGCATCCTTCATAATGCCATTTCAAGACCTAATGGCCTGAAGGTGCCCAAGGGTAACTACCAATGGCATTGTACGTATAAATGCAATTTTGCAATTAACAGCTGCGATATTTTAATCGTGCAATGTGATCACAGGCTATTACTACCTGGTTGATGCTGGGTACCAAAATGCAGAGGGTTTCCTAGCATCCTATAGAGGACAACGCTACTACTTACAGGAATAGCTTGGCACTAAAAATGCACCTTCAACGTCGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCTTAATGTAATCGAAAGAGCATTCAATGTCTTGAAGGGTCGATAGGTGATACTGCAGGAAAAGTCATACTACCATATAGAAGTCCAATGTCGCACAATACTCGCATGTTGTCTCCTCCATAACCTTATTAATAGAGAGATGACAAACTTTTATATAGAAGACGACATAGATGAGGTTGATTCCACCCACGCAACTACTATCGTCGATGACATACATTACATAGAGACGTCCAATTAGTGAACTCAGTGGAGGACGACCTTGTTGAAGAAATGTTTAGTGACTGGAATTTGCGTAACCAGTAGAACAATTAAATATTCATCGTTCATTTTCATACTTCAGTAGTGATTGCACTGGGTCTTATTTTGTCATAGTTTTCAGAATATATTTGTTTTGAATGTATTGATTACGCAAATAAATTAATGGAAAACTATTTTTCAGAACGAGTTGAAGGTACTATGTATGTAATCATAGGAAATTAATGAAACTAACATGTTTGTGTTTGATTTCTAGCATGGCAAGTTCATCGAGATTACCTTAGCACAATTGGAATAAAGAGAAAGAGGCAGGCCTCGTGCAGTTAGTCAATGCTGGTGGGTGAAGGTCCGACAACGAAACGTTTAGGCCCAGGTACCTAAATCAGCTGGCGAGAATGATAGCCTTCAAGATCCCAGGTTCTAACGTCCATGCTTCAACGATCAATAGCCGAGTAAAATTGTTGAAGAGAATGTTTCATGCACTTGCGAAGATGCGTGGCCCAACTTGCAATGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAAAGAAAGAAGTCCTCGACGAATGGGTTAAGGTGCGTTACTAGTCATTTGAACAATTACTTTAGTATATTTAAAAAAATGGACTAACAATTTAGTATTGCACTTGTACAGAGTCATCCAACGGCCAAAGGCCTCCTCAATAAGTCGTTTCCCCACTATGACAAATTATCGTACGTGTTTGCAAAGATCGTTTAACGAGAGGCTGGACCAAGACTTTTGCAGATGTTGGGTCAAATGATCCTGCTGGGTACGAGGCATTTGTCGCTGACGCAGCGTCGCATACAGACTTCCAGCTAATATACATTCAAGGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAACCGTTTGGGTAAGGTAAGGTCGGTATGTTTCGAGCGGGTCTAAGCGAAAACATAGAGGACAGGCCGCAAACAGTGGGAAAGTAATTCGCACTGCGATTGAGTACATAAATGAACAACTTAACCGCATTGCTGAATGACCTATCCTACAACGTCATGACGCAAGCCAAACACATCAAGAGGTTGTCCGACAGTTGGAGGCCATCTCTGAGCCGACATTGATGGATAGGTGTCGCTTAATGAGTATACTTATGCGTAACGTCAACGACATGGAAGCTTTCTTTGAAGTTCCCAACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACTGA

mRNA sequence

ATGATTCATGCCCCAGACCTTGTGTGTCACCAGAGTACGAGAATGGATCGAAGATGTTTTGCCATTCTGTGCCACCTACTGAGGACCATTGTTGGACTAACGTCGACGGAAGTCGTCGATGTTGGGGAGATGGTAGTAATGTTCCTCCACATTCTTGCGCACGACATGAAAAGTTGTGTCATTCAACGGGAGTTCATGCGGTCAGAACGAGTTGAAGGTACTATGTCCGACAACGAAACGTTTAGGCCCAGGTACCTAAATCAGCTGGCGAGAATGATAGCCTTCAAGATCCCAGGTTCTAACGTCCATGCTTCAACGATCAATAGCCGAGTAAAATTGTTGAAGAGAATGTTTCATGCACTTGCGAAGATGCGTGGCCCAACTTGCAATGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAAAGAAAGAAGTCCTCGACGAATGGGTTAAGAGTCATCCAACGGCCAAAGGCCTCCTCAATAAGTCGTTTCCCCACTATGACAAATTATCAGGCTGGACCAAGACTTTTGCAGATGTTGGGTCAAATGATCCTGCTGGGTACGAGGCATTTGTCGCTGACGCAGCGTCGCATACAGACTTCCAGCTAATATACATTCAAGGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAACCGTTTGGTTGGAGGCCATCTCTGAGCCGACATTGATGGATAGGTGTCGCTTAATGAGTATACTTATGCGTAACGTCAACGACATGGAAGCTTTCTTTGAAGTTCCCAACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACTGA

Coding sequence (CDS)

ATGATTCATGCCCCAGACCTTGTGTGTCACCAGAGTACGAGAATGGATCGAAGATGTTTTGCCATTCTGTGCCACCTACTGAGGACCATTGTTGGACTAACGTCGACGGAAGTCGTCGATGTTGGGGAGATGGTAGTAATGTTCCTCCACATTCTTGCGCACGACATGAAAAGTTGTGTCATTCAACGGGAGTTCATGCGGTCAGAACGAGTTGAAGGTACTATGTCCGACAACGAAACGTTTAGGCCCAGGTACCTAAATCAGCTGGCGAGAATGATAGCCTTCAAGATCCCAGGTTCTAACGTCCATGCTTCAACGATCAATAGCCGAGTAAAATTGTTGAAGAGAATGTTTCATGCACTTGCGAAGATGCGTGGCCCAACTTGCAATGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAAAGAAAGAAGTCCTCGACGAATGGGTTAAGAGTCATCCAACGGCCAAAGGCCTCCTCAATAAGTCGTTTCCCCACTATGACAAATTATCAGGCTGGACCAAGACTTTTGCAGATGTTGGGTCAAATGATCCTGCTGGGTACGAGGCATTTGTCGCTGACGCAGCGTCGCATACAGACTTCCAGCTAATATACATTCAAGGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAACCGTTTGGTTGGAGGCCATCTCTGAGCCGACATTGATGGATAGGTGTCGCTTAATGAGTATACTTATGCGTAACGTCAACGACATGGAAGCTTTCTTTGAAGTTCCCAACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACTGA

Protein sequence

MIHAPDLVCHQSTRMDRRCFAILCHLLRTIVGLTSTEVVDVGEMVVMFLHILAHDMKSCVIQREFMRSERVEGTMSDNETFRPRYLNQLARMIAFKIPGSNVHASTINSRVKLLKRMFHALAKMRGPTCNGFGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLSGWTKTFADVGSNDPAGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTRTVWLEAISEPTLMDRCRLMSILMRNVNDMEAFFEVPNNMKYPYCSIILQEN
Homology
[Close]
BLAST of MELO3C028665.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 280.8 bits (717), Expect = 5.0e-72
Identity = 151/272 (55.51%), Postives = 173/272 (63.60%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNVHASTINSRVKLLKRMFHALAKMRGPTCNGF 132
           G  SDN TFRP YLNQLARM+AFKIPGSN+HASTI+SR+KL+KRMFHALA+MRGP C+GF
Sbjct: 387 GWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGF 446

Query: 133 GWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFADV 192
           GWNDE+KCIVA+KEV D+W  SHP AKGLLNKSF HYD+LS          G  ++FAD+
Sbjct: 447 GWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADI 506

Query: 193 GSNDPAGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTRTV------------------ 252
           GSNDP GY+A  ADA   TDF  +Y  GLNMSPD+LM TRT                   
Sbjct: 507 GSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPG 566

Query: 253 -------------------------W------------------LEAISEPTLMDRCRLM 274
                                    W                  LEAI E TLMDRCRLM
Sbjct: 567 HATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLM 626


HSP 2 Score: 65.9 bits (159), Expect = 2.5e-07
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 29 TIVGLTSTEVVDVGEMVVMFLHILAHDMKSCVIQREFMRS 69
          TI GLTSTEVVDV EMV MFLHILAHD+KS VI+REFMRS
Sbjct: 57 TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 96

[Close]
BLAST of MELO3C028665.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 5.7e-60
Identity = 115/163 (70.55%), Postives = 132/163 (80.98%), Query Frame = 0 

Query: 71  VEGTMSDNETFRPRYLNQLARMIAFKIPGSNVHASTINSRVKLLKRMFHALAKMRGPTCN 130
           V G  SDN TFRP YLNQLARM+AFKIPGSN+HASTI+SR+KL+KRMFHALA+MRGP C+
Sbjct: 26  VGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCS 85

Query: 131 GFGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFA 190
           GFGWNDE+KCIVA+KEV D+WVKSHPTAKGLLNKSF HYD+LS          G  ++FA
Sbjct: 86  GFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 145

Query: 191 DVGSNDPAGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTRT 224
           D+GSNDP GY+AF ADA   TDF  +Y   LNMSPD+LM TRT
Sbjct: 146 DIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSPDDLMETRT 188

[Close]
BLAST of MELO3C028665.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 109/161 (67.70%), Postives = 124/161 (77.02%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNVHASTINSRVKLLKRMFHALAKMRGPTCNGF 132
           G  SDN TF P YLNQLARM+AFKIPG N+HASTI+SR+KLLKRMFHALA+MRGP C+GF
Sbjct: 28  GWRSDNGTFHPGYLNQLARMMAFKIPGCNIHASTIDSRIKLLKRMFHALAEMRGPNCSGF 87

Query: 133 GWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFADV 192
           GWNDE+KCIVA+KE       SHP AKGLLNKSF HYD+LS          G  + FAD+
Sbjct: 88  GWNDEKKCIVAEKE-------SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADI 147

Query: 193 GSNDPAGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTRT 224
           GSNDPAGY+AFVADAA  T+F  +Y   LNMSPD+LM TRT
Sbjct: 148 GSNDPAGYDAFVADAAPDTNFSPMYSPRLNMSPDDLMETRT 181

[Close]
BLAST of MELO3C028665.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 6.8e-37
Identity = 80/162 (49.38%), Postives = 112/162 (69.14%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNV-HASTINSRVKLLKRMFHALAKMRGPTCNG 132
           G  SDN TF+P YL QL RM+A K+PG+N+  +STI+  VK LK+ +HA+A+MRGP+C+G
Sbjct: 32  GWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSG 91

Query: 133 FGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFAD 192
           FGWN+E +CI+A++++ D W+KSHP AKGLL+KSFP+YD LS            ++TF +
Sbjct: 92  FGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPN 151

Query: 193 VGSNDPAGYEAFVADAASH-TDFQLIYIQGLNMSPDELMGTR 223
           VGSN    +   +    SH  D   +Y QG++MSPDE+ G R
Sbjct: 152 VGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIR 193

[Close]
BLAST of MELO3C028665.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35
Identity = 81/162 (50.00%), Postives = 109/162 (67.28%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNVHAST-INSRVKLLKRMFHALAKMRGPTCNG 132
           G  SDN TFRP YL QL RM+A K+ G  V A+T I+ R+K LKR F A+A+M GP C+G
Sbjct: 349 GWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSG 408

Query: 133 FGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFAD 192
           FGWNDE+KCIVA+KE+ D WV+S P AKGLLN  FP+YD+L+           + +TFAD
Sbjct: 409 FGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFAD 468

Query: 193 VGSNDP-AGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTR 223
           VGSN+P  GY+ F      + DF  +Y +G+++  D++  +R
Sbjct: 469 VGSNEPGGGYDRFDM-GDGNEDFPPVYSRGVDILQDDVRASR 509


HSP 2 Score: 107.1 bits (266), Expect = 9.8e-20
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 1  MIHAPDLVCHQSTRMDRRCFAILCHLLRTIVGLTSTEVVDVGEMVVMFLHILAHDMKSCV 60
          MIH  DLVC QSTRMDRR FAILCHLLR + GL+STE+VDV EMV MFLH+LAHD+K+ V
Sbjct: 1  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 61 IQREFMRS 69
          IQ+EF+RS
Sbjct: 61 IQQEFVRS 68

[Close]
BLAST of MELO3C028665.2 vs. TAIR10
Match: AT4G02210.1 (unknown protein)

HSP 1 Score: 43.1 bits (100), Expect = 3.2e-04
Identity = 21/66 (31.82%), Postives = 37/66 (56.06%), Query Frame = 0 

Query: 107 INSRVKLLKRMFHALAKMRGPTCNGFGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSF 166
           + +R K L+ +F ++  +     +GF W+D ++ +VA   V DE++K HP ++    KS 
Sbjct: 66  LKNRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSI 125

Query: 167 PHYDKL 173
           P Y  L
Sbjct: 126 PCYKDL 129

[Close]
BLAST of MELO3C028665.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72
Identity = 151/272 (55.51%), Postives = 173/272 (63.60%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNVHASTINSRVKLLKRMFHALAKMRGPTCNGF 132
           G  SDN TFRP YLNQLARM+AFKIPGSN+HASTI+SR+KL+KRMFHALA+MRGP C+GF
Sbjct: 387 GWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGF 446

Query: 133 GWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFADV 192
           GWNDE+KCIVA+KEV D+W  SHP AKGLLNKSF HYD+LS          G  ++FAD+
Sbjct: 447 GWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADI 506

Query: 193 GSNDPAGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTRTV------------------ 252
           GSNDP GY+A  ADA   TDF  +Y  GLNMSPD+LM TRT                   
Sbjct: 507 GSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPG 566

Query: 253 -------------------------W------------------LEAISEPTLMDRCRLM 274
                                    W                  LEAI E TLMDRCRLM
Sbjct: 567 HATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLM 626


HSP 2 Score: 65.9 bits (159), Expect = 1.7e-07
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 29 TIVGLTSTEVVDVGEMVVMFLHILAHDMKSCVIQREFMRS 69
          TI GLTSTEVVDV EMV MFLHILAHD+KS VI+REFMRS
Sbjct: 57 TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRS 96

[Close]
BLAST of MELO3C028665.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.8e-60
Identity = 115/163 (70.55%), Postives = 132/163 (80.98%), Query Frame = 0 

Query: 71  VEGTMSDNETFRPRYLNQLARMIAFKIPGSNVHASTINSRVKLLKRMFHALAKMRGPTCN 130
           V G  SDN TFRP YLNQLARM+AFKIPGSN+HASTI+SR+KL+KRMFHALA+MRGP C+
Sbjct: 26  VGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCS 85

Query: 131 GFGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFA 190
           GFGWNDE+KCIVA+KEV D+WVKSHPTAKGLLNKSF HYD+LS          G  ++FA
Sbjct: 86  GFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 145

Query: 191 DVGSNDPAGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTRT 224
           D+GSNDP GY+AF ADA   TDF  +Y   LNMSPD+LM TRT
Sbjct: 146 DIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSPDDLMETRT 188

[Close]
BLAST of MELO3C028665.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 109/161 (67.70%), Postives = 124/161 (77.02%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNVHASTINSRVKLLKRMFHALAKMRGPTCNGF 132
           G  SDN TF P YLNQLARM+AFKIPG N+HASTI+SR+KLLKRMFHALA+MRGP C+GF
Sbjct: 28  GWRSDNGTFHPGYLNQLARMMAFKIPGCNIHASTIDSRIKLLKRMFHALAEMRGPNCSGF 87

Query: 133 GWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFADV 192
           GWNDE+KCIVA+KE       SHP AKGLLNKSF HYD+LS          G  + FAD+
Sbjct: 88  GWNDEKKCIVAEKE-------SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAEIFADI 147

Query: 193 GSNDPAGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTRT 224
           GSNDPAGY+AFVADAA  T+F  +Y   LNMSPD+LM TRT
Sbjct: 148 GSNDPAGYDAFVADAAPDTNFSPMYSPRLNMSPDDLMETRT 181

[Close]
BLAST of MELO3C028665.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.5e-37
Identity = 80/162 (49.38%), Postives = 112/162 (69.14%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNV-HASTINSRVKLLKRMFHALAKMRGPTCNG 132
           G  SDN TF+P YL QL RM+A K+PG+N+  +STI+  VK LK+ +HA+A+MRGP+C+G
Sbjct: 32  GWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSG 91

Query: 133 FGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFAD 192
           FGWN+E +CI+A++++ D W+KSHP AKGLL+KSFP+YD LS            ++TF +
Sbjct: 92  FGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPN 151

Query: 193 VGSNDPAGYEAFVADAASH-TDFQLIYIQGLNMSPDELMGTR 223
           VGSN    +   +    SH  D   +Y QG++MSPDE+ G R
Sbjct: 152 VGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIR 193

[Close]
BLAST of MELO3C028665.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 81/162 (50.00%), Postives = 109/162 (67.28%), Query Frame = 0 

Query: 73  GTMSDNETFRPRYLNQLARMIAFKIPGSNVHAST-INSRVKLLKRMFHALAKMRGPTCNG 132
           G  SDN TFRP YL QL RM+A K+ G  V A+T I+ R+K LKR F A+A+M GP C+G
Sbjct: 349 GWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSG 408

Query: 133 FGWNDEQKCIVAKKEVLDEWVKSHPTAKGLLNKSFPHYDKLS----------GWTKTFAD 192
           FGWNDE+KCIVA+KE+ D WV+S P AKGLLN  FP+YD+L+           + +TFAD
Sbjct: 409 FGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFAD 468

Query: 193 VGSNDP-AGYEAFVADAASHTDFQLIYIQGLNMSPDELMGTR 223
           VGSN+P  GY+ F      + DF  +Y +G+++  D++  +R
Sbjct: 469 VGSNEPGGGYDRFDM-GDGNEDFPPVYSRGVDILQDDVRASR 509


HSP 2 Score: 107.1 bits (266), Expect = 6.5e-20
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 1  MIHAPDLVCHQSTRMDRRCFAILCHLLRTIVGLTSTEVVDVGEMVVMFLHILAHDMKSCV 60
          MIH  DLVC QSTRMDRR FAILCHLLR + GL+STE+VDV EMV MFLH+LAHD+K+ V
Sbjct: 1  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 61 IQREFMRS 69
          IQ+EF+RS
Sbjct: 61 IQQEFVRS 68

The following BLAST results are available for this feature:
BLAST of MELO3C028665.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34114.15.0e-7255.51retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008466949.15.7e-6070.55PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo][more]
XP_008459131.12.3e-5367.70PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo][more]
XP_008441954.16.8e-3749.38PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
ADN33754.11.7e-3550.00retrotransposon protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C028665.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02210.13.2e-0431.82unknown protein[more]
BLAST of MELO3C028665.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C028665.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GCB5|E5GCB5_CUCME3.3e-7255.51Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3CTN6|A0A1S3CTN6_CUCME3.8e-6070.55uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=... [more]
tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME1.5e-5367.70uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=... [more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME4.5e-3749.38uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
tr|E5GBB2|E5GBB2_CUCME1.1e-3550.00Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028665.2.1MELO3C028665.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31704:SF62SUBFAMILY NOT NAMEDcoord: 76..172
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 76..172

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C028665.2Wax gourdmedwgoB212
MELO3C028665.2Wax gourdmedwgoB236
MELO3C028665.2Cucumber (Gy14) v2cgybmedB085
MELO3C028665.2Cucumber (Gy14) v2cgybmedB464
MELO3C028665.2Cucumber (Gy14) v2cgybmedB465
MELO3C028665.2Cucumber (Gy14) v1cgymedB321
MELO3C028665.2Cucumber (Gy14) v1cgymedB322
MELO3C028665.2Cucurbita maxima (Rimu)cmamedB107
MELO3C028665.2Cucurbita maxima (Rimu)cmamedB534
MELO3C028665.2Cucurbita maxima (Rimu)cmamedB590
MELO3C028665.2Cucurbita moschata (Rifu)cmomedB096
MELO3C028665.2Cucurbita moschata (Rifu)cmomedB521
MELO3C028665.2Cucurbita moschata (Rifu)cmomedB577
MELO3C028665.2Cucurbita pepo (Zucchini)cpemedB261
MELO3C028665.2Cucurbita pepo (Zucchini)cpemedB317
MELO3C028665.2Cucurbita pepo (Zucchini)cpemedB721
MELO3C028665.2Wild cucumber (PI 183967)cpimedB097
MELO3C028665.2Wild cucumber (PI 183967)cpimedB521
MELO3C028665.2Wild cucumber (PI 183967)cpimedB523
MELO3C028665.2Cucumber (Chinese Long) v2cumedB097
MELO3C028665.2Cucumber (Chinese Long) v2cumedB509
MELO3C028665.2Melon (DHL92) v3.6.1medmedB040
MELO3C028665.2Bottle gourd (USVL1VR-Ls)lsimedB067
MELO3C028665.2Bottle gourd (USVL1VR-Ls)lsimedB101
MELO3C028665.2Watermelon (Charleston Gray)medwcgB190
MELO3C028665.2Watermelon (97103) v1medwmB233
MELO3C028665.2Silver-seed gourdcarmedB0204
MELO3C028665.2Silver-seed gourdcarmedB1047
MELO3C028665.2Cucumber (Chinese Long) v3cucmedB100
MELO3C028665.2Cucumber (Chinese Long) v3cucmedB535
MELO3C028665.2Cucumber (Chinese Long) v3cucmedB536
MELO3C028665.2Watermelon (97103) v2medwmbB164