MELO3C026540 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026540
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Carboxypeptidase A6
Location	chr3 : 23068416 .. 23068685 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCCCGAGTATCTTGACGAAACTGAGTTCCATCCAAAGAGCAACGTAGACAAGCTGGTGTCCATTGATGAATATCTTGAAGGTTACTTGATTGAGAGAAGTAGCAGATATGGAAAGAAGAGGGAGGTGTTTGACCTAGGGATGCAAGAGATGAGAACTTATTTTAGGCTATTTTTGTTGTCATCAGTTTTATTGATGTTCATGTTTTGTTCTAGAATTTCTAAAAACAAGTTCACCAGACCACTTGTTTCTGCCATTTCCATTTGA

mRNA sequence

ATGGGTCCCGAGTATCTTGACGAAACTGAGTTCCATCCAAAGAGCAACGTAGACAAGCTGGTGTCCATTGATGAATATCTTGAAGGTTACTTGATTGAGAGAAGTAGCAGATATGGAAAGAAGAGGGAGGTGTTTGACCTAGGGATGCAAGAGATGAGAACTTATTTTAGGCTATTTTTGTTGTCATCAGTTTTATTGATGTTCATGTTTTGTTCTAGAATTTCTAAAAACAAGTTCACCAGACCACTTGTTTCTGCCATTTCCATTTGA

Coding sequence (CDS)

ATGGGTCCCGAGTATCTTGACGAAACTGAGTTCCATCCAAAGAGCAACGTAGACAAGCTGGTGTCCATTGATGAATATCTTGAAGGTTACTTGATTGAGAGAAGTAGCAGATATGGAAAGAAGAGGGAGGTGTTTGACCTAGGGATGCAAGAGATGAGAACTTATTTTAGGCTATTTTTGTTGTCATCAGTTTTATTGATGTTCATGTTTTGTTCTAGAATTTCTAAAAACAAGTTCACCAGACCACTTGTTTCTGCCATTTCCATTTGA

Protein sequence

MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFLLSSVLLMFMFCSRISKNKFTRPLVSAISI*

Homology

[Close]

BLAST of MELO3C026540 vs. TrEMBL
Match: A0A0A0KFG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358080 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.7e-41
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 60
           MGPEYLDETEF PKSN+DKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL
Sbjct: 346 MGPEYLDETEFRPKSNIDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 405

Query: 61  LSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           LSSVLLMFMFCSRISKNKFTRPLVSAISI
Sbjct: 406 LSSVLLMFMFCSRISKNKFTRPLVSAISI 434

[Close]

BLAST of MELO3C026540 vs. TrEMBL
Match: A0A067KP91_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08094 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.0e-25
Identity = 62/90 (68.89%), Postives = 76/90 (84.44%), Query Frame = 1


Query: 1   MGPEYLDETEFHPK-SNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLF 60
           +GP  LDET+     S ++K VSIDEYL+GYL+ER +RYGKK EV D+GMQE+RTYFRLF
Sbjct: 337 LGPLQLDETQSKASTSGLEKWVSIDEYLDGYLMERRNRYGKKLEVLDVGMQEIRTYFRLF 396

Query: 61  LLSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           LLSSVLL+FMFCSRISK+K +RP+VSAI +
Sbjct: 397 LLSSVLLLFMFCSRISKSKSSRPIVSAIPL 426

[Close]

BLAST of MELO3C026540 vs. TrEMBL
Match: M5XWE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005933mg PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-25
Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNV---DKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFR 60
           +GP  L E   + K++V   DK VSIDEYL+GYL+ERSSRYGKK EV +LGMQE+RTYFR
Sbjct: 347 LGPNQLGEN--YSKTSVPTLDKWVSIDEYLDGYLVERSSRYGKKMEVLELGMQEIRTYFR 406

Query: 61  LFLLSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           LFLLSSVLL+FMFCSRISK K  RP+VSAI++
Sbjct: 407 LFLLSSVLLLFMFCSRISKGKCARPIVSAIAL 436

[Close]

BLAST of MELO3C026540 vs. TrEMBL
Match: B9GQ18_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s01190g PE=4 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-25
Identity = 64/92 (69.57%), Postives = 75/92 (81.52%), Query Frame = 1


Query: 1   MGPEYLDETEFHPK---SNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFR 60
           +GP  LD    H K   S VDK VSIDEYL+GYL+ER +RYGKK EV D+GMQE+RTYFR
Sbjct: 336 LGPLQLDGN--HSKAMASGVDKFVSIDEYLDGYLMERRNRYGKKMEVLDVGMQEIRTYFR 395

Query: 61  LFLLSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           LFLLSSVLL+FMFCSRI+K K +RP+VSA+SI
Sbjct: 396 LFLLSSVLLLFMFCSRIAKGKSSRPIVSALSI 425

[Close]

BLAST of MELO3C026540 vs. TrEMBL
Match: A0A151RZ42_CAJCA (Carboxypeptidase A6 OS=Cajanus cajan GN=KK1_030564 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.5e-25
Identity = 61/83 (73.49%), Postives = 74/83 (89.16%), Query Frame = 1


Query: 10  EFHPKSNV---DKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFLLSSVLL 69
           EF+ K+++   D+LVSIDEYL+GYL+ER +RYGKK EV +LGMQE+RTYFRLFLLSSVLL
Sbjct: 353 EFNSKASMLKLDRLVSIDEYLDGYLMERRNRYGKKMEVLELGMQEIRTYFRLFLLSSVLL 412

Query: 70  MFMFCSRISKNKFTRPLVSAISI 90
           MFMFCSRISK+K TRP+VSAI +
Sbjct: 413 MFMFCSRISKSKCTRPIVSAIPL 435

[Close]

BLAST of MELO3C026540 vs. TAIR10
Match: AT5G42320.1 (AT5G42320.1 Zn-dependent exopeptidases superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-24
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 60
           +GP +LD    +     DK VSIDEYL+GYL+ER +RYGK  EV D+GMQE++TYFRLFL
Sbjct: 295 LGPLHLDG---NTSKAADKWVSIDEYLDGYLVERKNRYGKNMEVIDVGMQEIKTYFRLFL 354

Query: 61  LSSVLLMFMFCSRISKNKFTR 82
           LSSVLLMFMFCSRI+K+K++R
Sbjct: 355 LSSVLLMFMFCSRIAKSKYSR 372

[Close]

BLAST of MELO3C026540 vs. NCBI nr
Match: gi|659129810|ref|XP_008464857.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103502627 [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 3.4e-42
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 60
           MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL
Sbjct: 419 MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 478

Query: 61  LSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           LSSVLLMFMFCSRISKNKFTRPLVSAISI
Sbjct: 479 LSSVLLMFMFCSRISKNKFTRPLVSAISI 507

[Close]

BLAST of MELO3C026540 vs. NCBI nr
Match: gi|449452969|ref|XP_004144231.1| (PREDICTED: metallocarboxypeptidase A-like protein ARB_03789 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 3.8e-41
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 60
           MGPEYLDETEF PKSN+DKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL
Sbjct: 346 MGPEYLDETEFRPKSNIDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 405

Query: 61  LSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           LSSVLLMFMFCSRISKNKFTRPLVSAISI
Sbjct: 406 LSSVLLMFMFCSRISKNKFTRPLVSAISI 434

[Close]

BLAST of MELO3C026540 vs. NCBI nr
Match: gi|657970616|ref|XP_008377071.1| (PREDICTED: carboxypeptidase A2 [Malus domestica])

HSP 1 Score: 128.6 bits (322), Expect = 5.3e-27
Identity = 69/93 (74.19%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNV----DKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYF 60
           +GPE L E   + KS+V    DK VSIDEYLEGYL+ERSSRYGKK EV +LGMQE+RTYF
Sbjct: 367 LGPEQLGEN--YSKSSVPTLLDKWVSIDEYLEGYLVERSSRYGKKMEVLELGMQEIRTYF 426

Query: 61  RLFLLSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           RLFLLSSVLLMFMFCSRISK+K  RP+VSAI+I
Sbjct: 427 RLFLLSSVLLMFMFCSRISKSKCARPIVSAIAI 457

[Close]

BLAST of MELO3C026540 vs. NCBI nr
Match: gi|470109931|ref|XP_004291241.1| (PREDICTED: carboxypeptidase A6 [Fragaria vesca subsp. vesca])

HSP 1 Score: 128.6 bits (322), Expect = 5.3e-27
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNVDKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYFRLFL 60
           +GP  L     + K  VDK VSIDEYL+GYL+ERSSRYGKK EV DLGMQE+RTYFRLFL
Sbjct: 348 LGPNLLGSN--YSKPAVDKWVSIDEYLDGYLVERSSRYGKKTEVLDLGMQEIRTYFRLFL 407

Query: 61  LSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           LSSVLL+FMFCSRISK+KF+RP+VSAI +
Sbjct: 408 LSSVLLLFMFCSRISKSKFSRPIVSAIPL 434

[Close]

BLAST of MELO3C026540 vs. NCBI nr
Match: gi|657970647|ref|XP_008377086.1| (PREDICTED: carboxypeptidase B2-like [Malus domestica])

HSP 1 Score: 126.3 bits (316), Expect = 2.6e-26
Identity = 67/93 (72.04%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 1   MGPEYLDETEFHPKSNV----DKLVSIDEYLEGYLIERSSRYGKKREVFDLGMQEMRTYF 60
           +GP+ L E   + K++V    DK VSIDEYLEGYL+ERSSRYGKK EV +LGMQE+RTYF
Sbjct: 348 LGPDQLGEN--YSKASVPTLLDKWVSIDEYLEGYLVERSSRYGKKMEVLELGMQEIRTYF 407

Query: 61  RLFLLSSVLLMFMFCSRISKNKFTRPLVSAISI 90
           RLFLLSSVLLMFMFCSRISK+K  RP+VSAI+I
Sbjct: 408 RLFLLSSVLLMFMFCSRISKSKCARPIVSAIAI 438

The following BLAST results are available for this feature:

BLAST of MELO3C026540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFG6_CUCSA	2.7e-41	97.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358080 PE=4 SV=1	[more]
A0A067KP91_JATCU	2.0e-25	68.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08094 PE=4 SV=1	[more]
M5XWE2_PRUPE	2.7e-25	69.57	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005933mg PE=4 SV=1	[more]
B9GQ18_POPTR	3.5e-25	69.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s01190g PE=4 SV=2	[more]
A0A151RZ42_CAJCA	4.5e-25	73.49	Carboxypeptidase A6 OS=Cajanus cajan GN=KK1_030564 PE=4 SV=1	[more]

BLAST of MELO3C026540 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42320.1	2.0e-24	65.43	Zn-dependent exopeptidases superfamily protein	[more]

BLAST of MELO3C026540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129810\|ref\|XP_008464857.1\|	3.4e-42	100.00	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103502627 [Cucumis me...	[more]
gi\|449452969\|ref\|XP_004144231.1\|	3.8e-41	97.75	PREDICTED: metallocarboxypeptidase A-like protein ARB_03789 [Cucumis sativus]	[more]
gi\|657970616\|ref\|XP_008377071.1\|	5.3e-27	74.19	PREDICTED: carboxypeptidase A2 [Malus domestica]	[more]
gi\|470109931\|ref\|XP_004291241.1\|	5.3e-27	73.03	PREDICTED: carboxypeptidase A6 [Fragaria vesca subsp. vesca]	[more]
gi\|657970647\|ref\|XP_008377086.1\|	2.6e-26	72.04	PREDICTED: carboxypeptidase B2-like [Malus domestica]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004181	metallocarboxypeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026540T1	MELO3C026540T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026540	Carg21874	Silver-seed gourd	carmeB0216

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026540	Wild cucumber (PI 183967)	cpimeB286
MELO3C026540	Wild cucumber (PI 183967)	cpimeB464
MELO3C026540	Cucumber (Chinese Long) v2	cumeB466
MELO3C026540	Watermelon (Charleston Gray)	mewcgB296
MELO3C026540	Watermelon (Charleston Gray)	mewcgB298
MELO3C026540	Watermelon (97103) v1	mewmB301
MELO3C026540	Cucurbita pepo (Zucchini)	cpemeB090
MELO3C026540	Cucurbita pepo (Zucchini)	cpemeB763
MELO3C026540	Bottle gourd (USVL1VR-Ls)	lsimeB470
MELO3C026540	Cucumber (Gy14) v2	cgybmeB246
MELO3C026540	Cucumber (Gy14) v2	cgybmeB406
MELO3C026540	Silver-seed gourd	carmeB0135
MELO3C026540	Silver-seed gourd	carmeB0356
MELO3C026540	Silver-seed gourd	carmeB0362
MELO3C026540	Cucumber (Chinese Long) v3	cucmeB475
MELO3C026540	Watermelon (97103) v2	mewmbB303
MELO3C026540	Wax gourd	mewgoB342
MELO3C026540	Melon (DHL92) v3.5.1	memeB126
MELO3C026540	Cucumber (Gy14) v1	cgymeB080
MELO3C026540	Cucurbita maxima (Rimu)	cmameB164
MELO3C026540	Cucurbita maxima (Rimu)	cmameB518
MELO3C026540	Cucurbita maxima (Rimu)	cmameB726
MELO3C026540	Cucurbita moschata (Rifu)	cmomeB153
MELO3C026540	Cucurbita moschata (Rifu)	cmomeB717