Carg21874 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21874
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Carboxypeptidase
Location	Cucurbita_argyrosperma_scaffold_111 : 116917 .. 122380 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAGCAGCAGATGGCCCTATCAGTTAGCTGTTCAAATTCTTTCTAAGAATGTTTCTTACAAAGCTATTGGGGATGATAATTGTGAAGGCTGCATGATCCACACCGTTCAACCTGCTGAAATTTCCATTTCTTTTCCCTTCTTTCATTTCATCATTTCCATTAAAGCTTTGCAACAATGGATCCTCTGTTGAACTCGAACTAAACCCACGATCTACTGTCCCTCTGTTTCTGCCGTATGGGTCGCTCTCTCTGTTCTCTCTTTCCCCTGTTCTGGATCTTCTTCTGCTTCTTCACATGTTTCAATTGTCTTCTCGTTACTGCTGAGGATCCTGACGGCAATAGATTAACTCCAATCAATCGCGATCTTTATCATTCTAGGTTTGTAATTCTTCTGATTCGGATTCATACACTTCTTTCGTAATTTTACTGCATCGATGATCGTTATCGTCGCTTTTCTCTCTGGAATTTGGGCATTTCATCATACAAACTCTATGCAGATTCTCTGTTGTAATTTTTGTTCTGGAATTTTGATTTAGTTGGCTATTTTAACGAGTCTGATACTGTTCTCTGCCGATCCAAGTTTTTGTAGGGTTTCATATTAGGTCATTTATCTTTGTTGAAGATTAACTTAGCATTCATATGGTTTGAATACTTTCAAGGGGTTTTTGTAATGGTGATCTATTCATTTAACAATGGTATACTTGATTCTTTCTGAATGTTTTCCCATTTTGTTGGATGATTGGATCTTGCAGTGTTGATTTGATGAAGGAGATAAAAGCTTTGGTCCATCGACACCCTGATAAGCTGACTGTATGTTCTTGTTGTTGGTTCTCCTTAATTCAGGCATGATGCTTTGGTTTGGTTACTTACTTTGATTATTTAAGCAGATAGAGACATTGGAGGCTAGAAATAAGGGCTATTTTGCAGAAATTCCTGTTGTTACATATTGCCATGGAAGGAATAAAGTTAATGACATGTCAAAATTCCGGATACTTCTTGTAAGTTTTGTGTTGAATTGCATACTCGTTTGACCTTCTAGGCTTTTATTCCTGTAAGACGTCAGTTGGGGAGGGAAACAAAATATTCCTGTGTGAAAACCTCTCCTTAGTAGATGCGTTTTAAAACCGTGAGGCAGACGGTGATATGTAATGGGCCAAAGCGGAGAATATTTACTCGTGGTAGGCTTGGGCTGTTACAAATGATATCAGAGCTAGACATGGGCGGTGTGCCAACGAGGACGCTGGCCCCCAGGGGTGGATTGTAAGATCCCATATCGGTTGGAGAGGGGAATGAAGCATTCCTTATAAGGGTGTGAAGACCTCTCCCTAGTAGATATGTTTTAAAACCGTTGCTGGACTTAGTGATCTAAACTAAAATAGGCTTACTTCATAGATCAGTTTTTTCTTTCTTTTCTTTTCTTTTCCTCCTTAAGGATTAAGGGAACATATCATCTCAGATTGGAAATTTGCTGGTGTTCTTGACAGATGATTCCTCCTTGTCTTCCAGAGTTTTGGACAGCATGGAAGGGAGCTCATAACAACAGAACTTGCACTGAGAATTCTTTTAATCTTGAGTGAAGAACAGTTGCTGCCCCACATGGATCGAGCTTCCTTAAGCAACACACTTGACAAGCTTGTCATTAAGGCATGTATAACACTCCAAGCTCACCGTTAGTAGATATTGTCCTCTTTCGGCTTTTCCTTTCGAATTTTCCCTCAAAATTTTTAAAACGCATTTGCTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTTTCTGTGGGAGCGTAGGCTGCAACTTTTTACATAGATAAGTGGAATAAATTAACGGCGTGTAAAGTTTTTGATTCTATAATTTTAGGAAAGTTACAGATAATCACACAGGATGCCTTCTCTTCCAGCTAACCTCTGGCTTTCTTTTTAAGTAGCAATGAAGTCCATGCAGTTAAGCCTGCATTGTAGTTAATACCCACATTTTTCTGCTCTTAATACTTGGTACTTGTGTTCATGCTTGAGCTTGAACATTGATCACCTCTATATTTATCAAGTTCTTCGATGTGGGTCGTGACAGATAGATTGATTATTAATGTATGGCCCCTTTATGGAAGAAATCTATGCTCTAACTGATATTGGTGCTTCAAACTTGAATCACATTTTTGTGTATGCATAAATGATGTTCTTGCTTATGTATGTTGTCAGGTGGTGCCAATGGAAAACTTAAACGGGCGCAGGCTCGTCGAGGACGGGGATCTATGTGAAAGAAGAAATGGTAATGCAGCTGGTTTACTCCATTATATGGTCATACATGGTCTCATGCCTGAGTTTGTGTTCTATGGCAGGGAGAGGTGTTGATTTGAATAGGAATTGGAGCGTCGATTGGGGTAAAAAGGAGAAGGTTGGTATCTATCTTCTGAGTTGCACTAGGAAAAAAATGTACAAAAAATGAAGAAGAGTATATTTGTGAGATCCCACGTCGGTTGGAGAGGGGAATGAAACATTTCTTATAAGGGTGTGGAGACCTTTCCTTAGTAGATGCATTTTAAAACGTGAGGCTGACGACGATACGTAATGGGCCAAAGCGAACAATAGATACTAGCGGTAGGCTTTGGCTGTTATAAATGGTATCGGAACCAATCACTGGACGGTGCGGGTCACAGGTCGGAGTAGAGCTAGACCCTCTCCATAGTAGATGCATTTTAAAACCGTGAGGCTGATGATGATACGTAACGGGCCAAATCGGACATCTGCTAGCAGTGAGCTTGAGTTGTTACAAATGGTATGAGAGCCAGACATCAGGTGGTGTGTCAGCAAGAACGCTGGGTCCCTAAGGGGGGTGGATTGTGAGATCCCACATTGATTGGGGAGGGGAACAAAGCATTCCTTAGAAGGGTGTAGAAACCTTTTCTTAGTAGGCCCATTTTAAAACCGTGAGGCTGACGGCAAAACGTAACGACCCAAAGTGGACAATATCTATTAGCAGTGGACTTGAGCTGTTACACCATTTTAGCCGTTTGGTAAGGTTTTATATTTCTCTCTTCAATTCCAACATTTTAGCTCTCCTTCTCCCTGTTGCAGGATTATAATCCTTACGAGGAAAATCCTGGATTTGCACCTTTCAGCGAACCAGAAACTCAAATGATGCGAAAACTTGCCTTAACATTTGATCCACATATATGGGTCAATGTGCATTCAGGCATGGAGGTAAGAAACAATACTAACTGAATGAAAATGGAACTCAAATTGTGTGTGGCATTCAATTTTGAAAGCCATTGCTGGGATTTTTCCATGCACATTTCATACAACTTGCTGCTTTTGATTCTCACTTCAATAGGCTTTGTTCATGCCTTATGACCATAAGAACACAACTCCTGATGGCCAAATTGCTCAACAAATGAAACTTCTGCTTCAAGAACTCAACAATCTCCATTGCCACCAGCGCTGCATGATTGGATCGGGCGGAGGTTCGGTCGGGTTAGTTTACTTCTTCATTAACTCTTTCTTTATTGTTTAGTAGGTAGGAATGTTCATGAATTGAATCGAGTTTGGACAATATTTCGGACCTAATTAATTGCTTGAATTGCAAGTTTTTTTCCAACCCAAACAAAACCCAACCAACACCAGTCCAATGATAAACCTAGTCCAACCCAACCCATAAAATATTTTGGATGAGTTAGTTCTGGTTGTTTGGATCATTTATTCATACTTTTTATTTTTAATATAAAATATTATCTATTTTTAACATTATTAAGATTTAAATGGTTACATATCTATTTTTAAACCTTATTAAGATTTAAATGACAATTTAAGAATTTATTGTTGAGTGCTTTTAGAGAATAAATAATAAATAAAATAATTATGAAATTAAATATATATCTATTTATTCTATAAAAAAAAAAAAAGAAGTATTTCTTTTTTCAAAATTAACACTCATGAACTAACTTAGATGGGTTAATATCAAATCCAACATGGCATAATTAGTTGATAAATACTGATTGATTTGAAGTAAATAATAAAAAAAAAAGTGTCTAACTAGATGAATAATGTGGCATGTATCTAAGCAAACAAGCAGATTATAACAATTTATACTTGATTTCATTTGAAATAAACTCAAAATCACCTTAAATTTATTATTCTTCAAAGATCCTAACAAAATGGTAAGAAAAGTTTTAAGCTTTAATTGATACAACTTTGCCCGGTAATGGGTATTTTTACTAAAATTTAAACACTAAATAGACAACTATCTATTATTTTGCAAGGAATCCAAACTTTTAGATGCCTCTAGGCTTAGTCTTGAAGGCTAATTGGTTTGAAGTTTTTGTTCTTTTAATTGAGAATTCCTTAGTTATTGCTCTTTGGGTCTGAAATACTTCCAGCATAATTGTTGTTTCTTAAGGTATCTGGCACATGGGACAGCCACAGATTTCATGTTTGACAAAGCAAGAATTCCCATGGCTTTCACTTTTGAGGTCTGTCAAGTCTGAACTGCTATCTAAACTTGCATGAACTAATCTTGGTTTTGGCCTTAAAATAAGCCTCTCTCTTCATCATGCTATCATATCAGATATATGGATACGAAGCTGCCTCACCAAAAGACTGCTTTAGAATGTTCAATCCCACAGATCCCACTACCTTCAATGTATGTGACATCTCCTGCTATCTATCTTGATCACTAAATGTCCATGGAAATCCTTAGCTGAATGCAATTTTCTTCTTTGTTTTTAGAGGGTTCTCGGCGACTGGTCTGCTGCGTTTTTTACAATTTTTAAGCTCGGTCCGGAGTACCTTGACAAGACCGAGCTCCGTTCAAGGGACAACTTAGACAGGCTGGTGTCGATTGATGATTATCTTGAAGGTTACTTGATTGAGAGGAGTAGCAGATATGGGAAGAAGAGGGAGGTGTTTGAGCTAGGGATGCAAGAAATGAGAACTTATTTTAGGCTATTTTTGTTGTCGTCAGTTTTATTGATGTTCATGTTTTGTTCCAGACTTTCTAAGAACAAGTTTAGACCACTTGTTTCTGCTATTTCCCTTTGACAGATACATTCAGAAAGATGTGTTTAATTTCTGGACTCCATATGTTTATCGCCACACTTACTCTAAACAAGTACAGATGATTGAGTTCTATCGACCTACGTCGAAGTTTCTATCTTTAAATGATACAAAAACAGACTGATTTAACAGATCATTCAAAGAAAGAAAAGAACTGAAAAGAACTCACATATTGAGGTCCTTGGATCAATGATTTCTTCTGCATTTTACTCAATATTGCAACCTATCGACCTCTATCGTTAAACGATACAAAAAAAGACTGATTTAGCATATTATGCAAAGAAAGAAAAGAACTCACATATTGAGGTCCTTGGATCAACTATTTCTTCTGCATTTTACTGTATGACATAAGAATGGTGAATATGTTATATAAACAATAATACAAGAATTATCAATAGATGGGAA

mRNA sequence

AGCAGCAGCAGATGGCCCTATCAGTTAGCTGTTCAAATTCTTTCTAAGAATGTTTCTTACAAAGCTATTGGGGATGATAATTGTGAAGGCTGCATGATCCACACCGTTCAACCTGCTGAAATTTCCATTTCTTTTCCCTTCTTTCATTTCATCATTTCCATTAAAGCTTTGCAACAATGGATCCTCTGTTGAACTCGAACTAAACCCACGATCTACTGTCCCTCTGTTTCTGCCGTATGGGTCGCTCTCTCTGTTCTCTCTTTCCCCTGTTCTGGATCTTCTTCTGCTTCTTCACATGTTTCAATTGTCTTCTCGTTACTGCTGAGGATCCTGACGGCAATAGATTAACTCCAATCAATCGCGATCTTTATCATTCTAGTGTTGATTTGATGAAGGAGATAAAAGCTTTGGTCCATCGACACCCTGATAAGCTGACTGTGGTGCCAATGGAAAACTTAAACGGGCGCAGGCTCGTCGAGGACGGGGATCTATGTGAAAGAAGAAATGGTAATGCAGCTGGTTTACTCCATTATATGGTCATACATGGTCTCATGCCTGAGTTTGTGTTCTATGGCAGGGAGAGGTATCTGGCACATGGGACAGCCACAGATTTCATGTTTGACAAAGCAAGAATTCCCATGGCTTTCACTTTTGAGATATATGGATACGAAGCTGCCTCACCAAAAGACTGCTTTAGAATGTTCAATCCCACAGATCCCACTACCTTCAATAGGGTTCTCGGCGACTGGTCTGCTGCGTTTTTTACAATTTTTAAGCTCGGTCCGGAGTACCTTGACAAGACCGAGCTCCGTTCAAGGGACAACTTAGACAGGCTGGTGTCGATTGATGATTATCTTGAAGGTTACTTGATTGAGAGGAGTAGCAGATATGGGAAGAAGAGGGAGGTGTTTGAGCTAGGGATGCAAGAAATGAGAACTTATTTTAGGCTATTTTTGTTGTCGTCAGTTTTATTGATGTTCATGTTTTGTTCCAGACTTTCTAAGAACAAGTTTAGACCACTTGTTTCTGCTATTTCCCTTTGACAGATACATTCAGAAAGATGTGTTTAATTTCTGGACTCCATATGTTTATCGCCACACTTACTCTAAACAAGTACAGATGATTGAGTTCTATCGACCTACGTCGAAGTTTCTATCTTTAAATGATACAAAAACAGACTGATTTAACAGATCATTCAAAGAAAGAAAAGAACTGAAAAGAACTCACATATTGAGGTCCTTGGATCAATGATTTCTTCTGCATTTTACTCAATATTGCAACCTATCGACCTCTATCGTTAAACGATACAAAAAAAGACTGATTTAGCATATTATGCAAAGAAAGAAAAGAACTCACATATTGAGGTCCTTGGATCAACTATTTCTTCTGCATTTTACTGTATGACATAAGAATGGTGAATATGTTATATAAACAATAATACAAGAATTATCAATAGATGGGAA

Coding sequence (CDS)

ATGGGTCGCTCTCTCTGTTCTCTCTTTCCCCTGTTCTGGATCTTCTTCTGCTTCTTCACATGTTTCAATTGTCTTCTCGTTACTGCTGAGGATCCTGACGGCAATAGATTAACTCCAATCAATCGCGATCTTTATCATTCTAGTGTTGATTTGATGAAGGAGATAAAAGCTTTGGTCCATCGACACCCTGATAAGCTGACTGTGGTGCCAATGGAAAACTTAAACGGGCGCAGGCTCGTCGAGGACGGGGATCTATGTGAAAGAAGAAATGGTAATGCAGCTGGTTTACTCCATTATATGGTCATACATGGTCTCATGCCTGAGTTTGTGTTCTATGGCAGGGAGAGGTATCTGGCACATGGGACAGCCACAGATTTCATGTTTGACAAAGCAAGAATTCCCATGGCTTTCACTTTTGAGATATATGGATACGAAGCTGCCTCACCAAAAGACTGCTTTAGAATGTTCAATCCCACAGATCCCACTACCTTCAATAGGGTTCTCGGCGACTGGTCTGCTGCGTTTTTTACAATTTTTAAGCTCGGTCCGGAGTACCTTGACAAGACCGAGCTCCGTTCAAGGGACAACTTAGACAGGCTGGTGTCGATTGATGATTATCTTGAAGGTTACTTGATTGAGAGGAGTAGCAGATATGGGAAGAAGAGGGAGGTGTTTGAGCTAGGGATGCAAGAAATGAGAACTTATTTTAGGCTATTTTTGTTGTCGTCAGTTTTATTGATGTTCATGTTTTGTTCCAGACTTTCTAAGAACAAGTTTAGACCACTTGTTTCTGCTATTTCCCTTTGA

Protein sequence

MGRSLCSLFPLFWIFFCFFTCFNCLLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVHRHPDKLTVVPMENLNGRRLVEDGDLCERRNGNAAGLLHYMVIHGLMPEFVFYGRERYLAHGTATDFMFDKARIPMAFTFEIYGYEAASPKDCFRMFNPTDPTTFNRVLGDWSAAFFTIFKLGPEYLDKTELRSRDNLDRLVSIDDYLEGYLIERSSRYGKKREVFELGMQEMRTYFRLFLLSSVLLMFMFCSRLSKNKFRPLVSAISL

Homology

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BLAST of Carg21874 vs. NCBI nr
Match: XP_022946458.1 (metallocarboxypeptidase A-like protein ARB_03789 isoform X2 [Cucurbita moschata])

HSP 1 Score: 376.7 bits (966), Expect = 6.5e-101
Identity = 248/433 (57.27%), Postives = 251/433 (57.97%), Query Frame = 0


Query: 1   MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH 60
           MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH
Sbjct: 1   MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH 60

Query: 61  RHPDKLT----------------------------------------------------- 120
           RHPDKLT                                                     
Sbjct: 61  RHPDKLTIETMEARNKGYFAEIPVVTYCHGRNKVNDMSKFRILLSFGQHGRELITTELAL 120

Query: 121 ------------------------------VVPMENLNGRRLVEDGDLCERRNGNAAGL- 180
                                         VVPMENLNGRRLVED DLCERRNG    L 
Sbjct: 121 RILLILSEEQLLPHMDRASLSNTLDKLVIKVVPMENLNGRRLVEDRDLCERRNGRGVDLN 180

Query: 181 --------------------------------------------LHYMVIHGLMPEFVFY 240
                                                       +   V  G+   F+ Y
Sbjct: 181 RNWSVDWGKKEKDYNPYEENPGFAPFSEPETQMMRKLALTFDPHIWVNVHSGMEALFMPY 240

Query: 241 -------------------------------------GRERYLAHGTATDFMFDKARIPM 269
                                                G   YLAHGTATDFMFDKARIPM
Sbjct: 241 DHKNTTPDGQIAQQMKLLLQELNNLHCHQRCMIGSGGGSVGYLAHGTATDFMFDKARIPM 300

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BLAST of Carg21874 vs. NCBI nr
Match: XP_023546094.1 (putative metallocarboxypeptidase ecm14 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 1.9e-100
Identity = 245/433 (56.58%), Postives = 251/433 (57.97%), Query Frame = 0


Query: 1   MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH 60
           MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH
Sbjct: 1   MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH 60

Query: 61  RHPDKLTV---------------------------------------------------- 120
           RHPDKLT+                                                    
Sbjct: 61  RHPDKLTIETMEARNKGYFAEIPVVTYCHGRNKVNDMSKFRILLSFGQHGRELITTELAL 120

Query: 121 -------------------------------VPMENLNGRRLVEDGDLCERRNGNAAGL- 180
                                          VPMENLNGRRLVEDGDLCERRNG    L 
Sbjct: 121 RILLILSEEQLLPHMDRASLSNTLDKLVIKMVPMENLNGRRLVEDGDLCERRNGRGVDLN 180

Query: 181 --------------------------------------------LHYMVIHGLMPEFVFY 240
                                                       +   V  G+   F+ Y
Sbjct: 181 RNWSVDWGKKEKDYNPYEENPGFAPFSEPETQMMRKLALTFDPHIWVNVHSGMEALFMPY 240

Query: 241 -------------------------------------GRERYLAHGTATDFMFDKARIPM 269
                                                G   YLAHGTATDFMFDKAR+PM
Sbjct: 241 DHKNTTPDGQIVQQMKLLLQELNNLHCHQRCMIGSGGGSVGYLAHGTATDFMFDKARVPM 300

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BLAST of Carg21874 vs. NCBI nr
Match: XP_022946457.1 (metallocarboxypeptidase A-like protein TRV_02598 isoform X1 [Cucurbita moschata])

HSP 1 Score: 374.0 bits (959), Expect = 4.2e-100
Identity = 248/444 (55.86%), Postives = 252/444 (56.76%), Query Frame = 0


Query: 1   MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH 60
           MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH
Sbjct: 1   MGRSLCXXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVH 60

Query: 61  RHPDKLT----------------------------------------------------- 120
           RHPDKLT                                                     
Sbjct: 61  RHPDKLTIETMEARNKGYFAEIPVVTYCHGRNKVNDMSKFRILLSFGQHGRELITTELAL 120

Query: 121 ------------------------------VVPMENLNGRRLVEDGDLCERRNGNAAGL- 180
                                         VVPMENLNGRRLVED DLCERRNG    L 
Sbjct: 121 RILLILSEEQLLPHMDRASLSNTLDKLVIKVVPMENLNGRRLVEDRDLCERRNGRGVDLN 180

Query: 181 --------------------------------------------LHYMVIHGLMPEFVFY 240
                                                       +   V  G+   F+ Y
Sbjct: 181 RNWSVDWGKKEKDYNPYEENPGFAPFSEPETQMMRKLALTFDPHIWVNVHSGMEALFMPY 240

Query: 241 GRE------------------------------------------------RYLAHGTAT 269
             +                                                RYLAHGTAT
Sbjct: 241 DHKNTTPDGQIAQQMKLLLQELNNLHCHQRCMIGSGGGSVGKQADYNNLYLRYLAHGTAT 300

[Close]

BLAST of Carg21874 vs. NCBI nr
Match: XP_022999691.1 (metallocarboxypeptidase A-like protein ARB_03789 isoform X1 [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 4.4e-97
Identity = 243/435 (55.86%), Postives = 249/435 (57.24%), Query Frame = 0


Query: 1   MGRSLC--XXXXXXXXXXXXXXXXXXXLVTAEDPDGNRLTPINRDLYHSSVDLMKEIKAL 60
           MGRSLC  XXXXXXXXXXXXXXXXXXXLV AEDPDGNRLTPI+RDLYHSSVDLMKEIKAL
Sbjct: 1   MGRSLCXXXXXXXXXXXXXXXXXXXXXLVNAEDPDGNRLTPIDRDLYHSSVDLMKEIKAL 60

Query: 61  VHRHPDKLT--------------------------------------------------- 120
           VHRHPDKLT                                                   
Sbjct: 61  VHRHPDKLTIETMEARNKGYFAEIPVVTYCHGRNKVNDMSKFRILLSFGQHGRELITTEL 120

Query: 121 --------------------------------VVPMENLNGRRLVEDGDLCERRNGNAAG 180
                                           VVPMENLNGRRLVEDGDLCERRNG    
Sbjct: 121 ALRILLILSEEQLLPHMDRASLSNTLDKLVIKVVPMENLNGRRLVEDGDLCERRNGRGVD 180

Query: 181 L---------------------------------------------LHYMVIHGLMPEFV 240
           L                                             +   V  G+   F+
Sbjct: 181 LNRNWSVDWGKKEKDYNPYEENPGFAPFSEPETQMMRKLALTFDPHIWVNVHSGMEALFM 240

Query: 241 FY-------------------------------------GRERYLAHGTATDFMFDKARI 269
            Y                                     G   YLAHGTATDFMFDKARI
Sbjct: 241 PYDHKNTTPDSQIAQQMKLLLEELNTLHCHQRCMIGSGGGSVGYLAHGTATDFMFDKARI 300

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BLAST of Carg21874 vs. NCBI nr
Match: XP_008464857.1 (PREDICTED: LOW QUALITY PROTEIN: metallocarboxypeptidase A-like protein TRV_02598 [Cucumis melo])

HSP 1 Score: 321.6 bits (823), Expect = 2.5e-84
Identity = 199/408 (48.77%), Postives = 214/408 (52.45%), Query Frame = 0


Query: 27  VTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVHRHPDKLT------------------- 86
           VTA+DPD  RLTPIN DLYHSSVDLMKEI+ALVHRHPDKLT                   
Sbjct: 102 VTADDPD--RLTPINHDLYHSSVDLMKEIEALVHRHPDKLTIETMKSKNKGYAAEIPVVT 161

Query: 87  ------------------------------------------------------------ 146
                                                                       
Sbjct: 162 YRRGRNNIDDTSKFRILLSFGQHGRELITTEVALRILLILSEEHLLPHMDRASLNNTLDK 221

Query: 147 ----VVPMENLNGRRLVEDGDLCERRNGNAAGL--------------------------- 206
               VVPMENLNGRRLVE GDLCERRNG    L                           
Sbjct: 222 LVIKVVPMENLNGRRLVEGGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGFAPF 281

Query: 207 ------------------LHYMVIHGLMPEFVFY-------------------------- 266
                             +   V  G+   F+ Y                          
Sbjct: 282 SEPETQIMRKIALRFDPHIWVNVHSGMEALFMPYDHKNTTPDGEIAQQMKLLLEELNHLH 341

Query: 267 -----------GRERYLAHGTATDFMFDKARIPMAFTFEIYGYEAASPKDCFRMFNPTDP 269
                      G   YLAHGTATDFMFDKAR+PMAFTFEIYG EAAS KDCFRMFNPTDP
Sbjct: 342 CHSRCMIGSGGGSVGYLAHGTATDFMFDKARVPMAFTFEIYGDEAASSKDCFRMFNPTDP 401

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BLAST of Carg21874 vs. TAIR10
Match: AT5G42320.1 (Zn-dependent exopeptidases superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 118/280 (42.14%), Postives = 148/280 (52.86%), Query Frame = 0


Query: 64  DKLTV--VPMENLNGRRLVEDGDLCERRNGNAAGL------------------------- 123
           DKL +  VP+EN NGR+ VE GDLCERRNG    L                         
Sbjct: 94  DKLVIKMVPIENPNGRKRVESGDLCERRNGRGVDLNRNWGVDWGKKEKDYDPSEENPGTA 153

Query: 124 --------------------LHYMVIHGLMPEFVFY------------------------ 183
                               +   V  G+   F+ Y                        
Sbjct: 154 PFSEPETQIMRKLAISFDPHIWINVHSGMEALFMPYDHKNITPEGLPSQKMRTLLEKLNK 213

Query: 184 -------------GRERYLAHGTATDFMFDKARIPMAFTFEIYGYEAASPKDCFRMFNPT 243
                        G   YLAHGTATD+++D  + PMAFTFEIYG    + +DCF+MFNP 
Sbjct: 214 FHCHDRCMIGSGGGSVGYLAHGTATDYIYDVVKAPMAFTFEIYGDNQTASRDCFKMFNPV 273

Query: 244 DPTTFNRVLGDWSAAFFTIFKLGPEYLDKTELRSRDNLDRLVSIDDYLEGYLIERSSRYG 260
           D   F RVL DWSAAFFTIF+LGP +LD    ++    D+ VSID+YL+GYL+ER +RYG
Sbjct: 274 DLPNFKRVLNDWSAAFFTIFQLGPLHLDGNTSKA---ADKWVSIDEYLDGYLVERKNRYG 333

[Close]

BLAST of Carg21874 vs. TrEMBL
Match: tr|A0A1S3CMF4|A0A1S3CMF4_CUCME (LOW QUALITY PROTEIN: metallocarboxypeptidase A-like protein TRV_02598 OS=Cucumis melo OX=3656 GN=LOC103502627 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.6e-84
Identity = 199/408 (48.77%), Postives = 214/408 (52.45%), Query Frame = 0


Query: 27  VTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVHRHPDKLT------------------- 86
           VTA+DPD  RLTPIN DLYHSSVDLMKEI+ALVHRHPDKLT                   
Sbjct: 102 VTADDPD--RLTPINHDLYHSSVDLMKEIEALVHRHPDKLTIETMKSKNKGYAAEIPVVT 161

Query: 87  ------------------------------------------------------------ 146
                                                                       
Sbjct: 162 YRRGRNNIDDTSKFRILLSFGQHGRELITTEVALRILLILSEEHLLPHMDRASLNNTLDK 221

Query: 147 ----VVPMENLNGRRLVEDGDLCERRNGNAAGL--------------------------- 206
               VVPMENLNGRRLVE GDLCERRNG    L                           
Sbjct: 222 LVIKVVPMENLNGRRLVEGGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGFAPF 281

Query: 207 ------------------LHYMVIHGLMPEFVFY-------------------------- 266
                             +   V  G+   F+ Y                          
Sbjct: 282 SEPETQIMRKIALRFDPHIWVNVHSGMEALFMPYDHKNTTPDGEIAQQMKLLLEELNHLH 341

Query: 267 -----------GRERYLAHGTATDFMFDKARIPMAFTFEIYGYEAASPKDCFRMFNPTDP 269
                      G   YLAHGTATDFMFDKAR+PMAFTFEIYG EAAS KDCFRMFNPTDP
Sbjct: 342 CHSRCMIGSGGGSVGYLAHGTATDFMFDKARVPMAFTFEIYGDEAASSKDCFRMFNPTDP 401

[Close]

BLAST of Carg21874 vs. TrEMBL
Match: tr|A0A0A0KFG6|A0A0A0KFG6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358080 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.7e-84
Identity = 198/408 (48.53%), Postives = 216/408 (52.94%), Query Frame = 0


Query: 27  VTAEDPDGNRLTPINRDLYHSSVDLMKEIKALVHRHPDKLT------------------- 86
           V+A+DP  NRLTPINRDLYHSSVDLMKEI+ALVHRH DKLT                   
Sbjct: 29  VSADDP--NRLTPINRDLYHSSVDLMKEIEALVHRHSDKLTIETMKSKNKGYAAEIPVVT 88

Query: 87  ------------------------------------------------------------ 146
                                                                       
Sbjct: 89  YRHGRNNIDDTSKFRILLSFGQHGRELITTEVALRILLILSEEHLLPHMDRASLNNTLAK 148

Query: 147 ----VVPMENLNGRRLVEDGDLCERRNGNAAGL--------------------------- 206
               VVPMENLNGRRLVE GDLCERRNG    L                           
Sbjct: 149 LVIKVVPMENLNGRRLVEGGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGFAPF 208

Query: 207 ------------------LHYMVIHGLMPEFVFY-------------------------- 266
                             +   V  G+   F+ Y                          
Sbjct: 209 SEPETQIMRKLALRFDPHIWVNVHSGMEALFMPYDHKNITPDGEISQQMKLLLEELNILH 268

Query: 267 -----------GRERYLAHGTATDFMFDKARIPMAFTFEIYGYEAASPKDCFRMFNPTDP 269
                      G   YLAHGTATDFMFDKAR+PMAFTFEIYG EAA+ KDCFRMFNPTDP
Sbjct: 269 CHSRCMIGSGGGSVGYLAHGTATDFMFDKARVPMAFTFEIYGDEAATSKDCFRMFNPTDP 328

[Close]

BLAST of Carg21874 vs. TrEMBL
Match: tr|W9RJ73|W9RJ73_9ROSA (Carboxypeptidase A6 OS=Morus notabilis OX=981085 GN=L484_024882 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 169/398 (42.46%), Postives = 189/398 (47.49%), Query Frame = 0


Query: 37  LTPINRDLYHSSVDLMKEIKALVHRHPDKLT----------------------------- 96
           LTPINRDLYHSS DLM+EIKALV+RHPDKLT                             
Sbjct: 38  LTPINRDLYHSSEDLMEEIKALVNRHPDKLTLETVKSRNKGYQADVKVVTFCRRRQESDD 97

Query: 97  ------------------------------------------------------VVPMEN 156
                                                                 VVPMEN
Sbjct: 98  KSKFRILLSFGQHGRELITSELALRILTILSEEQFLPDLDPTSLNSTLDKFIIKVVPMEN 157

Query: 157 LNGRRLVEDGDLCERRNGNAAGL------------------------------------- 216
            NGR LVE GDLCERRNG    L                                     
Sbjct: 158 SNGRELVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGTAPFSEPETQIMRK 217

Query: 217 --------LHYMVIHGLMPEFVFY------------------------------------ 269
                   +   V  G+   F+ Y                                    
Sbjct: 218 LGISFDPHIWVNVHSGMEALFMPYDHKNTTPDGIASQQMKLLLKKLNHLHCDERCMIGSG 277

[Close]

BLAST of Carg21874 vs. TrEMBL
Match: tr|A0A2P6PZH3|A0A2P6PZH3_ROSCH (Putative carboxypeptidase A OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0304271 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64
Identity = 172/398 (43.22%), Postives = 194/398 (48.74%), Query Frame = 0


Query: 37  LTPINRDLYHSSVDLMKEIKALVHRHPDKLT----------------------------- 96
           LTPI+RDLYHSS DLM+EIKALV RH DKLT                             
Sbjct: 39  LTPIDRDLYHSSGDLMEEIKALVLRHKDKLTLDTIKAQNKGYSAEIAVVTYSRRRQEADD 98

Query: 97  ------------------------------------------------------VVPMEN 156
                                                                 VVPMEN
Sbjct: 99  KPRFRILLSFGQHGRELITSEVALRILSILCIEKFLPNLDQASLDQTLDNLVIKVVPMEN 158

Query: 157 LNGRRLVEDGDLCERRNGNAAGLLH----------------------------------- 216
           LNGRRLVE GDLCERRNG    L                                     
Sbjct: 159 LNGRRLVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGTAPFSEPEAQIMRK 218

Query: 217 ---------YMVIH-GLMPEFVFY------------------------------------ 269
                    ++ IH G+   F+ Y                                    
Sbjct: 219 IAVSFDPHIWVNIHSGMEALFMPYDHKNTTPDGVPSQKMKSLLEELNHLHCQKRCMIGSG 278

[Close]

BLAST of Carg21874 vs. TrEMBL
Match: tr|A0A067KP91|A0A067KP91_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08094 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.4e-64
Identity = 163/405 (40.25%), Postives = 198/405 (48.89%), Query Frame = 0


Query: 31  DPDGNRLTPINRDLYHSSVDLMKEIKALVHRHPDKLT----------------------- 90
           +   +  TPINRDLYH+SVDL+++IKALVHRHPDKLT                       
Sbjct: 22  EKSNSTFTPINRDLYHASVDLLEQIKALVHRHPDKLTVETIETENKGYQAEITVVTYCRS 81

Query: 91  ------------------------------------------------------------ 150
                                                                       
Sbjct: 82  RRESDDRSKFRILLSFGQHGRELITTELALRILSILSEEQFLPNISPASLNSTLDKLVIK 141

Query: 151 VVPMENLNGRRLVEDGDLCERRNGNAAGLLH----------------------------- 210
           VVPMENLNGR+LVE+GDLCERRNG    L                               
Sbjct: 142 VVPMENLNGRKLVEEGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGTGPFSEPE 201

Query: 211 ---------------YMVIH-GLMPEFVFY------------------------------ 269
                          ++ +H G+   F+ Y                              
Sbjct: 202 TQIMRKLALSFDPHVWVNVHSGMEALFMPYDHKNTTPDGLPSRRMRSLLSELNQIHCHKR 261

The following BLAST results are available for this feature:

BLAST of Carg21874 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946458.1	6.5e-101	57.27	metallocarboxypeptidase A-like protein ARB_03789 isoform X2 [Cucurbita moschata]	[more]
XP_023546094.1	1.9e-100	56.58	putative metallocarboxypeptidase ecm14 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022946457.1	4.2e-100	55.86	metallocarboxypeptidase A-like protein TRV_02598 isoform X1 [Cucurbita moschata]	[more]
XP_022999691.1	4.4e-97	55.86	metallocarboxypeptidase A-like protein ARB_03789 isoform X1 [Cucurbita maxima]	[more]
XP_008464857.1	2.5e-84	48.77	PREDICTED: LOW QUALITY PROTEIN: metallocarboxypeptidase A-like protein TRV_02598...	[more]

BLAST of Carg21874 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42320.1	1.2e-51	42.14	Zn-dependent exopeptidases superfamily protein	[more]

BLAST of Carg21874 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg21874 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CMF4\|A0A1S3CMF4_CUCME	1.6e-84	48.77	LOW QUALITY PROTEIN: metallocarboxypeptidase A-like protein TRV_02598 OS=Cucumis...	[more]
tr\|A0A0A0KFG6\|A0A0A0KFG6_CUCSA	3.7e-84	48.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358080 PE=4 SV=1	[more]
tr\|W9RJ73\|W9RJ73_9ROSA	1.4e-64	42.46	Carboxypeptidase A6 OS=Morus notabilis OX=981085 GN=L484_024882 PE=4 SV=1	[more]
tr\|A0A2P6PZH3\|A0A2P6PZH3_ROSCH	4.2e-64	43.22	Putative carboxypeptidase A OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0304271 ...	[more]
tr\|A0A067KP91\|A0A067KP91_JATCU	9.4e-64	40.25	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08094 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004181	metallocarboxypeptidase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21874-RA	Carg21874-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 268..268
None	No IPR available	PANTHER	PTHR11705	PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B	coord: 66..92
None	No IPR available	PANTHER	PTHR11705	PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B	coord: 116..256
None	No IPR available	PANTHER	PTHR11705:SF119	ZN-DEPENDENT EXOPEPTIDASES SUPERFAMILY PROTEIN	coord: 116..256
None	No IPR available	PANTHER	PTHR11705:SF119	ZN-DEPENDENT EXOPEPTIDASES SUPERFAMILY PROTEIN	coord: 66..92
None	No IPR available	SUPERFAMILY	SSF53187	Zn-dependent exopeptidases	coord: 66..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21874	Cla021940	Watermelon (97103) v1	carwmB0199
Carg21874	Csa6G358080	Cucumber (Chinese Long) v2	carcuB0236
Carg21874	MELO3C026540	Melon (DHL92) v3.5.1	carmeB0216
Carg21874	ClCG08G009440	Watermelon (Charleston Gray)	carwcgB0205
Carg21874	CSPI06G18700	Wild cucumber (PI 183967)	carcpiB0242
Carg21874	Cucsa.077590	Cucumber (Gy14) v1	carcgyB0255
Carg21874	CmaCh05G009850	Cucurbita maxima (Rimu)	carcmaB0290
Carg21874	CmaCh12G006750	Cucurbita maxima (Rimu)	carcmaB0289
Carg21874	CmoCh05G010030	Cucurbita moschata (Rifu)	carcmoB0296
Carg21874	CmoCh12G006130	Cucurbita moschata (Rifu)	carcmoB0294
Carg21874	Lsi08G007950	Bottle gourd (USVL1VR-Ls)	carlsiB188
Carg21874	Cp4.1LG11g07850	Cucurbita pepo (Zucchini)	carcpeB0297
Carg21874	Cp4.1LG07g05770	Cucurbita pepo (Zucchini)	carcpeB0299
Carg21874	CsGy6G018160	Cucumber (Gy14) v2	carcgybB0225
Carg21874	MELO3C026539.2	Melon (DHL92) v3.6.1	carmedB0221
Carg21874	CsaV3_6G031580	Cucumber (Chinese Long) v3	carcucB0240
Carg21874	Cla97C08G152270	Watermelon (97103) v2	carwmbB0214
Carg21874	Bhi04G001239	Wax gourd	carwgoB0261

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21874	Carg17647	Silver-seed gourd	carcarB159

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21874	Silver-seed gourd	carcarB247
Carg21874	Silver-seed gourd	carcarB248
Carg21874	Cucurbita moschata (Rifu)	carcmoB0295
Carg21874	Cucurbita pepo (Zucchini)	carcpeB0298