MELO3C026289.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C026289.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionhomeobox protein knotted-1-like 2
Locationchr02 : 26192992 .. 26194120 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGCTAACTCTTATCACTCATCATCAACGACGACGTTGGAGACTCTTCCCATTCCGACGCATTCTGCGGATTATTCTCACCCTCTTCCGGATTTTGAAGCCGAACATTCCAGGCCGTTTTCGTCCGTGGCCTCCAAAACTGCTATTACGGCGGAGACGAAAACAGCTTGTGCTATTCCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTGGTTTAGTTTTCTATTATGAGATCTAAGAACGCGACATTTTTAAGGTTTAAAGAATGCAATAATGCTCGCGCTTTTTGGATGTTGAGGAACGAAGGAAAATTCTTAAAAATTGGTGTGAATTATAATTTATCTACACCGATAATGTGGTTGACTATGCCAAACTTATAATTCAGTAGTTTTACATTTGTTTTCATCTTCAATGTGAAGTTTTAGTTCATTTCCATTTTCCAAGAGTAAGATTCCAGTAAATCGCATCTCAGCTAGGGGAAAAACGAAACGAAACCTGATGATACCTAGCTAGTCGGAAAATCAACAGTAGTTTCGAATCCAAATTCTGCGAGCTACAGTTTAATTTGTTTCAGGTGTAGATTCGTTAGTTTTTTATTTCAATCCTTTATGGCCTTTTCAGGTCGGCGCGCCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCATCGGCAAAGAAAATCCCTGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTCGACGAATTCATGGTATTTAACCTCGCTTTGCTTTGACCGGTGATTGAACATTAGATAGTTTATACTTTTATTAGTTTAATTTACAATTTCAAACAGAGAATAATCTGCGGGCTATTAGCCAAATACGAGCTGGATCTGTGTCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGAAATGCAGTTAAATTTGCTCTGCGAGGGCACCAACAGAGGCTACGTTTCCTCCGGTTCGTCATTCTCCCTCTCTTTCATAATAAGACAATCTGTTGATTTGATTTCTTATTTTATTGAGTAA

mRNA sequence

ATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGCTAACTCTTATCACTCATCATCAACGACGACGTTGGAGACTCTTCCCATTCCGACGCATTCTGCGGATTATTCTCACCCTCTTCCGGATTTTGAAGCCGAACATTCCAGGCCGTTTTCGTCCGTGGCCTCCAAAACTGCTATTACGGCGGAGACGAAAACAGCTTGTGCTATTCCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCGGCGCGCCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCATCGGCAAAGAAAATCCCTGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTCGACGAATTCATGAGAATAATCTGCGGGCTATTAGCCAAATACGAGCTGGATCTGTGTCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGAAATGCAGTTAAATTTGCTCTGCGAGGGCACCAACAGAGGCTACGTTTCCTCCGGTTCGTCATTCTCCCTCTCTTTCATAATAAGACAATCTGTTGATTTGATTTCTTATTTTATTGAGTAA

Coding sequence (CDS)

ATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGCTAACTCTTATCACTCATCATCAACGACGACGTTGGAGACTCTTCCCATTCCGACGCATTCTGCGGATTATTCTCACCCTCTTCCGGATTTTGAAGCCGAACATTCCAGGCCGTTTTCGTCCGTGGCCTCCAAAACTGCTATTACGGCGGAGACGAAAACAGCTTGTGCTATTCCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCGGCGCGCCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCATCGGCAAAGAAAATCCCTGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTCGACGAATTCATGAGAATAATCTGCGGGCTATTAGCCAAATACGAGCTGGATCTGTGTCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGAAATGCAGTTAAATTTGCTCTGCGAGGGCACCAACAGAGGCTACGTTTCCTCCGGTTCGTCATTCTCCCTCTCTTTCATAATAAGACAATCTGTTGATTTGATTTCTTATTTTATTGAGTAA

Protein sequence

MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAITAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEGTNRGYVSSGSSFSLSFIIRQSVDLISYFIE
Homology
[Close]
BLAST of MELO3C026289.2 vs. NCBI nr
Match: XP_008464567.1 (PREDICTED: homeobox protein knotted-1-like 2 [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 3.1e-114
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT
Sbjct: 33  MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 92

Query: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120
           AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI
Sbjct: 93  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 152

Query: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180
           IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG
Sbjct: 153 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 212

Query: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 211
           TNRGYVSSGSSFSLSFIIRQSVDLISYFIE
Sbjct: 213 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 242

[Close]
BLAST of MELO3C026289.2 vs. NCBI nr
Match: XP_004138104.1 (PREDICTED: homeobox protein knotted-1-like 2 isoform X2 [Cucumis sativus] >KGN63571.1 hypothetical protein Csa_1G004870 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 155/194 (79.90%), Postives = 162/194 (83.51%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AE-TKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
            IG ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 -IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSSGSSFS 194
            T RGYVS   + S
Sbjct: 181 DTTRGYVSDNEAAS 193

[Close]
BLAST of MELO3C026289.2 vs. NCBI nr
Match: XP_011656609.1 (PREDICTED: homeobox protein knotted-1-like 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 1.8e-74
Identity = 154/189 (81.48%), Postives = 161/189 (85.19%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AE-TKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
            IG ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 -IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSS 189
            T RGYVS+
Sbjct: 181 DTTRGYVSA 188

[Close]
BLAST of MELO3C026289.2 vs. NCBI nr
Match: XP_011656688.1 (PREDICTED: homeobox protein knotted-1-like 2 isoform X3 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 1.8e-74
Identity = 154/189 (81.48%), Postives = 161/189 (85.19%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AE-TKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
            IG ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 -IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSS 189
            T RGYVS+
Sbjct: 181 DTTRGYVSA 188

[Close]
BLAST of MELO3C026289.2 vs. NCBI nr
Match: XP_022928493.1 (homeobox protein knotted-1-like 6 [Cucurbita moschata] >XP_022928502.1 homeobox protein knotted-1-like 6 [Cucurbita moschata])

HSP 1 Score: 201.4 bits (511), Expect = 2.9e-48
Identity = 114/194 (58.76%), Postives = 130/194 (67.01%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIP-------THSADYSHPLPDFEAEHSRPFSSV 60
           MA LYGLHPLA  SY SSS   L+ L +P       T S+DYSHPL  F + H    SS 
Sbjct: 1   MADLYGLHPLADYSYESSSAAPLDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSSG 60

Query: 61  ASKTAITAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQ 120
               A+ A       + EEESAG IR KIASHPLYP+LVDAF++CQK+GAPPEVA IL +
Sbjct: 61  DYDAALVA------VVSEEESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 CNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQ 180
             RG++ IG+    VST LG DPELDEFM   CG+LAKY+LDL  P  EASSFL NME Q
Sbjct: 121 SLRGSD-IGERTSSVSTRLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQ 180

Query: 181 LNLLCEGTNRGYVS 188
           LN LC GT RGYVS
Sbjct: 181 LNRLCNGTTRGYVS 187

[Close]
BLAST of MELO3C026289.2 vs. TAIR10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2)

HSP 1 Score: 122.5 bits (306), Expect = 3.1e-28
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 0 

Query: 25  TLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAITAETKTACAIPEEE-SAGVIRAKIA 84
           TL +P   +DY   +     ++ R F S    TA+++E        E+  S  VI++KIA
Sbjct: 18  TLMMP---SDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLSVIKSKIA 77

Query: 85  SHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMR 144
           SHPLYP+L+  +++CQKVGAP E+A IL++  R N++  K +    +C G DPELDEFM 
Sbjct: 78  SHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVY-KRDVAPLSCFGADPELDEFME 137

Query: 145 IICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 181
             C +L KY+ DL +P +EA++F+  +EMQL  LC G
Sbjct: 138 TYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTG 170

[Close]
BLAST of MELO3C026289.2 vs. TAIR10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-26
Identity = 79/203 (38.92%), Postives = 109/203 (53.69%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEH--SRPF-SSVASKT 60
           M G+Y  H     S  S    + E+L  P   +DY   L     E+  S  F S      
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFP---SDYQALLCSSAGENRVSDVFGSDELLSV 60

Query: 61  AITAETKTACAIPEE-------ESAGVIRAKIASHPLYPKLVDAFLNCQK--VGAPPEVA 120
           A++A +  A +I  E        S  VI+AKIA HP YP+L+ A+++CQK  VGAPPE+A
Sbjct: 61  AVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIA 120

Query: 121 KILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLK 180
            +L++  R +++  K+    S+C G DPELDEFM   C +L KY+ DL +P +EA+ FL 
Sbjct: 121 CLLEEIQRESDVY-KQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLN 180

Query: 181 NMEMQLNLLCEGTN--RGYVSSG 190
            +EMQL  LC G    RG    G
Sbjct: 181 KIEMQLRNLCTGVESARGVSEDG 199

[Close]
BLAST of MELO3C026289.2 vs. TAIR10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-18
Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 0 

Query: 79  RAKIASHPLYPKLVDAFLNCQKVGAPPE-VAKILDQCNRGNNIIGKENPCVSTCLGTDPE 138
           +AKI +HP Y +L+ A++NCQKVGAPPE VA++ + C           P  + CLG DP 
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACXXXXXXXXSMGP--TGCLGEDPG 181

Query: 139 LDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEGTNRGYVSSGSSFS 194
           LD+FM   C +L KYE +L +P +EA  FL+ +E Q   L        +SS SSFS
Sbjct: 182 LDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLS-------LSSPSSFS 228

[Close]
BLAST of MELO3C026289.2 vs. TAIR10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 0 

Query: 78  IRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPE 137
           ++AKI +HP Y  L+ A+L+CQK+GAPP+V   +    +      + +    +    DPE
Sbjct: 134 MKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPE 193

Query: 138 LDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
           LD+FM   C +L KY  +L +P++EA  F++ +E QL++LC+
Sbjct: 194 LDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQ 235

[Close]
BLAST of MELO3C026289.2 vs. TAIR10
Match: AT5G11060.1 (KNOTTED1-like homeobox gene 4)

HSP 1 Score: 44.7 bits (104), Expect = 8.3e-05
Identity = 29/104 (27.88%), Postives = 49/104 (47.12%), Query Frame = 0 

Query: 79  RAKIASHPLYPKLVDAFLNCQKVGAP-PEVAKILDQCNRGNNIIGKENPCVST---CLGT 138
           +A+I SHPLY +L+ A + C ++  P  ++ +I  Q  +  N++ K +   +      G 
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLLAGD 183

Query: 139 DPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLC 179
           D ELD FM         Y L LC   E+    ++   M+  + C
Sbjct: 184 DKELDHFM-------THYVLLLCSFKEQLQQHVRVHAMEAVMAC 220

[Close]
BLAST of MELO3C026289.2 vs. Swiss-Prot
Match: sp|P46640|KNAT2_ARATH (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-27
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 0 

Query: 25  TLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAITAETKTACAIPEEE-SAGVIRAKIA 84
           TL +P   +DY   +     ++ R F S    TA+++E        E+  S  VI++KIA
Sbjct: 18  TLMMP---SDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLSVIKSKIA 77

Query: 85  SHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMR 144
           SHPLYP+L+  +++CQKVGAP E+A IL++  R N++  K +    +C G DPELDEFM 
Sbjct: 78  SHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVY-KRDVAPLSCFGADPELDEFME 137

Query: 145 IICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 181
             C +L KY+ DL +P +EA++F+  +EMQL  LC G
Sbjct: 138 TYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTG 170

[Close]
BLAST of MELO3C026289.2 vs. Swiss-Prot
Match: sp|Q84JS6|KNAT6_ARATH (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-26
Identity = 79/201 (39.30%), Postives = 109/201 (54.23%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEH--SRPF-SSVASKT 60
           M G+Y  H     S  S    + E+L  P   +DY   L     E+  S  F S      
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFP---SDYQALLCSSAGENRVSDVFGSDELLSV 60

Query: 61  AITAETKTACAIPEE-------ESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKI 120
           A++A +  A +I  E        S  VI+AKIA HP YP+L+ A+++CQKVGAPPE+A +
Sbjct: 61  AVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACL 120

Query: 121 LDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNM 180
           L++  R +++  K+    S+C G DPELDEFM   C +L KY+ DL +P +EA+ FL  +
Sbjct: 121 LEEIQRESDVY-KQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKI 180

Query: 181 EMQLNLLCEGTN--RGYVSSG 190
           EMQL  LC G    RG    G
Sbjct: 181 EMQLRNLCTGVESARGVSEDG 197

[Close]
BLAST of MELO3C026289.2 vs. Swiss-Prot
Match: sp|P46608|HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.3e-19
Identity = 51/119 (42.86%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 79  RAKIASHPLYPKLVDAFLNCQKVGAPPE-VAKILDQCNRGNNIIGKENPCVSTCLGTDPE 138
           +AKI +HP Y +L+ A++NCQKVGAPPE VA++ + C     + G +    S+C+G DP 
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPA 184

Query: 139 LDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLC-----EGTNRGYVSSGSS 192
           LD+FM   C +L KYE +L +PL+EA  FL+ +E Q   L        +N G   +GSS
Sbjct: 185 LDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFASNEGGDRNGSS 243

[Close]
BLAST of MELO3C026289.2 vs. Swiss-Prot
Match: sp|Q9FP29|KNOS1_ORYSJ (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.3e-19
Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 0 

Query: 77  VIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDP 136
           +++A+IA HP YP L+ A++ C+KVGAPPEVA +L +  R               +G DP
Sbjct: 42  LMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERXXXXXXXXXGQ--IGVDP 101

Query: 137 ELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 181
           ELDEFM   C +L +Y+ +L +P +EA+SFL +++ QL+ LC G
Sbjct: 102 ELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSG 143

[Close]
BLAST of MELO3C026289.2 vs. Swiss-Prot
Match: sp|A2Y007|KNOSA_ORYSI (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH71 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 0 

Query: 77  VIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTC---LG 136
           +++A+IA HP YP L+ A++ C+KVGAPPEV  +L++  R     G+     +T    +G
Sbjct: 54  LMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGRE----GRGGXXXATAGGEIG 113

Query: 137 TDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 181
            DPELDEFM   C +L +Y+ +L +P +EA+SFL  +  QL  LC G
Sbjct: 114 LDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGG 156

[Close]
BLAST of MELO3C026289.2 vs. TrEMBL
Match: tr|A0A1S3CLY2|A0A1S3CLY2_CUCME (homeobox protein knotted-1-like 2 OS=Cucumis melo OX=3656 GN=LOC103502408 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.0e-114
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT
Sbjct: 33  MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 92

Query: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120
           AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI
Sbjct: 93  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 152

Query: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180
           IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG
Sbjct: 153 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 212

Query: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 211
           TNRGYVSSGSSFSLSFIIRQSVDLISYFIE
Sbjct: 213 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 242

[Close]
BLAST of MELO3C026289.2 vs. TrEMBL
Match: tr|A0A0A0LU96|A0A0A0LU96_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004870 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 9.3e-75
Identity = 155/194 (79.90%), Postives = 162/194 (83.51%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AE-TKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
            IG ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 -IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSSGSSFS 194
            T RGYVS   + S
Sbjct: 181 DTTRGYVSDNEAAS 193

[Close]
BLAST of MELO3C026289.2 vs. TrEMBL
Match: tr|D7SHP3|D7SHP3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_17s0000g08710 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-35
Identity = 86/195 (44.10%), Postives = 119/195 (61.03%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSH--PLPDFEAEHSRPFSSVASKTA 60
           M  LYGLH  +++ YH       E L  P+H  +++   P P F ++     SS+    A
Sbjct: 1   MDQLYGLHSPSSSDYHHPPPFPPENLISPSHYPNFNSPAPFPIFGSDQLLSASSLVVSDA 60

Query: 61  ITAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGN 120
            +   +       EE +  IRAKIA+HPLYPKL+ A++ CQKVGAPPEVA +L++  RG+
Sbjct: 61  ASMVAEIQGGGSGEEVSSAIRAKIATHPLYPKLLHAYIECQKVGAPPEVAYLLEEIRRGS 120

Query: 121 NIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLC 180
            +  +    VSTCLG DPELDEFM   C +L KY+ DL +P +EA++FL N+E QLN LC
Sbjct: 121 ELCRRN--AVSTCLGADPELDEFMETYCDILVKYKSDLARPFDEATAFLNNIETQLNTLC 180

Query: 181 EGTNRGYVSSGSSFS 194
            G +R YVS  ++ S
Sbjct: 181 NGASRSYVSDEAAGS 193

[Close]
BLAST of MELO3C026289.2 vs. TrEMBL
Match: tr|F6GV99|F6GV99_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g01750 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33
Identity = 84/196 (42.86%), Postives = 118/196 (60.20%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSH--PLPDFEAEHSRPFSSVASKTA 60
           M  LYGL+  +++ YH       + L  P+H  +++   P P F  +     SSVA   A
Sbjct: 1   MDQLYGLYSPSSSDYHHPPPFPPKNLISPSHYPNFNSPAPFPIFGFDQLLSASSVAVSDA 60

Query: 61  ITAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGN 120
            +   +       +E +  IR +IA+HPLYPKL+ A++ CQKVGAPPEVA +L++  RG+
Sbjct: 61  TSMVAQIQGGGSGDEVSSAIRTQIATHPLYPKLLHAYIECQKVGAPPEVAYLLEEIRRGS 120

Query: 121 NIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLC 180
            +  +    VSTCLG DPELDEFM   C +L KY+ DL +P +EA++FL N+E QLN LC
Sbjct: 121 ELCRRNT--VSTCLGADPELDEFMETYCNVLMKYKSDLARPFDEATAFLNNIETQLNTLC 180

Query: 181 EGTNRGYVSSGSSFSL 195
            G +R YVS   + SL
Sbjct: 181 NGASRSYVSDEVARSL 194

[Close]
BLAST of MELO3C026289.2 vs. TrEMBL
Match: tr|V5K953|V5K953_9ROSI (KNOX transcription factor 2 OS=Betula luminifera OX=312789 GN=KNOX2 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.3e-30
Identity = 86/202 (42.57%), Postives = 122/202 (60.40%), Query Frame = 0 

Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSH----PLPDFEAEHSRP-FSSVAS 60
           M  +YGL+  A  S +  +  + + L +PT +ADY      P   F   H  P F S   
Sbjct: 2   MDEIYGLNSAAEYSDNYKALMSPDNLILPTTTADYYQGLLSPPGAFRDHHRIPIFGSDEL 61

Query: 61  KTAITAETKTACAIP----EEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKIL 120
            +A +A ++ A   P    EE+ + VI+A+IASHP YP+L+ A+++CQKVGAPPE+A +L
Sbjct: 62  LSAASAISEAASFTPEIQREEDMSSVIKARIASHPCYPRLLQAYIDCQKVGAPPEIASLL 121

Query: 121 DQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNME 180
           D+  R N+   ++   VST LG DPELDEFM   C +L KY+ DL +P +EA++FL  +E
Sbjct: 122 DEIRRENDTCKRD--VVSTYLGADPELDEFMETYCDMLVKYKSDLSRPFDEATTFLSKIE 181

Query: 181 MQLNLLCEGTNRGYVSSGSSFS 194
            QL+ LC  T+ G VSS   FS
Sbjct: 182 TQLSNLC--TDEGAVSSDEDFS 199

The following BLAST results are available for this feature:
BLAST of MELO3C026289.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464567.13.1e-114100.00PREDICTED: homeobox protein knotted-1-like 2 [Cucumis melo][more]
XP_004138104.11.4e-7479.90PREDICTED: homeobox protein knotted-1-like 2 isoform X2 [Cucumis sativus] >KGN63... [more]
XP_011656609.11.8e-7481.48PREDICTED: homeobox protein knotted-1-like 2 isoform X1 [Cucumis sativus][more]
XP_011656688.11.8e-7481.48PREDICTED: homeobox protein knotted-1-like 2 isoform X3 [Cucumis sativus][more]
XP_022928493.12.9e-4858.76homeobox protein knotted-1-like 6 [Cucurbita moschata] >XP_022928502.1 homeobox ... [more]
BLAST of MELO3C026289.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70510.13.1e-2842.04KNOTTED-like from Arabidopsis thaliana 2[more]
AT1G23380.26.6e-2638.92KNOTTED1-like homeobox gene 6[more]
AT1G62360.11.0e-1843.97KNOX/ELK homeobox transcription factor[more]
AT4G08150.11.1e-1737.25KNOTTED-like from Arabidopsis thaliana[more]
AT5G11060.18.3e-0527.88KNOTTED1-like homeobox gene 4[more]
BLAST of MELO3C026289.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P46640|KNAT2_ARATH5.7e-2742.04Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ... [more]
sp|Q84JS6|KNAT6_ARATH3.7e-2639.30Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ... [more]
sp|P46608|HSBH1_SOYBN3.3e-1942.86Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1[more]
sp|Q9FP29|KNOS1_ORYSJ3.3e-1943.27Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS... [more]
sp|A2Y007|KNOSA_ORYSI2.2e-1842.99Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH... [more]
BLAST of MELO3C026289.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CLY2|A0A1S3CLY2_CUCME2.0e-114100.00homeobox protein knotted-1-like 2 OS=Cucumis melo OX=3656 GN=LOC103502408 PE=4 S... [more]
tr|A0A0A0LU96|A0A0A0LU96_CUCSA9.3e-7579.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004870 PE=3 SV=1[more]
tr|D7SHP3|D7SHP3_VITVI1.9e-3544.10Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_17s0000g08710 PE=3 SV=... [more]
tr|F6GV99|F6GV99_VITVI1.8e-3342.86Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g01750 PE=4 SV=... [more]
tr|V5K953|V5K953_9ROSI5.3e-3042.57KNOX transcription factor 2 OS=Betula luminifera OX=312789 GN=KNOX2 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR005541KNOX2
IPR005540KNOX1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0034047 regulation of protein phosphatase type 2A activity
biological_process GO:0007165 signal transduction
cellular_component GO:0005634 nucleus
cellular_component GO:0000159 protein phosphatase type 2A complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0019888 protein phosphatase regulator activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026289.2.1MELO3C026289.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005540KNOX1SMARTSM01255KNOX1_2coord: 76..120
e-value: 5.5E-16
score: 69.1
IPR005540KNOX1PFAMPF03790KNOX1coord: 78..116
e-value: 6.3E-19
score: 67.3
IPR005541KNOX2SMARTSM01256KNOX2_2coord: 128..179
e-value: 5.4E-14
score: 62.5
IPR005541KNOX2PFAMPF03791KNOX2coord: 132..178
e-value: 7.3E-17
score: 60.7
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 1..183
NoneNo IPR availablePANTHERPTHR11850:SF99HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATEDcoord: 1..183

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C026289.2Csa1G004870Cucumber (Chinese Long) v2cumedB046
MELO3C026289.2CSPI01G01310Wild cucumber (PI 183967)cpimedB049
MELO3C026289.2Cucsa.196820Cucumber (Gy14) v1cgymedB359
MELO3C026289.2Lsi06G015610Bottle gourd (USVL1VR-Ls)lsimedB419
MELO3C026289.2Cp4.1LG04g15560Cucurbita pepo (Zucchini)cpemedB727
MELO3C026289.2CsGy1G001370Cucumber (Gy14) v2cgybmedB043
MELO3C026289.2Cla019201Watermelon (97103) v1medwmB283
MELO3C026289.2ClCG06G017080Watermelon (Charleston Gray)medwcgB246
MELO3C026289.2ClCG08G017830Watermelon (Charleston Gray)medwcgB256
MELO3C026289.2Cla97C06G126730Watermelon (97103) v2medwmbB247
MELO3C026289.2Carg20220Silver-seed gourdcarmedB1027
MELO3C026289.2CsaV3_1G001430Cucumber (Chinese Long) v3cucmedB050
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C026289.2Cucurbita moschata (Rifu)cmomedB117
MELO3C026289.2Cucumber (Gy14) v2cgybmedB037
MELO3C026289.2Cucumber (Gy14) v1cgymedB114
MELO3C026289.2Cucurbita maxima (Rimu)cmamedB068
MELO3C026289.2Cucurbita maxima (Rimu)cmamedB129
MELO3C026289.2Cucurbita maxima (Rimu)cmamedB229
MELO3C026289.2Cucurbita maxima (Rimu)cmamedB428
MELO3C026289.2Cucurbita moschata (Rifu)cmomedB060
MELO3C026289.2Cucurbita moschata (Rifu)cmomedB120
MELO3C026289.2Cucurbita moschata (Rifu)cmomedB215
MELO3C026289.2Cucurbita pepo (Zucchini)cpemedB040
MELO3C026289.2Cucurbita pepo (Zucchini)cpemedB386
MELO3C026289.2Cucurbita pepo (Zucchini)cpemedB567
MELO3C026289.2Wild cucumber (PI 183967)cpimedB041
MELO3C026289.2Cucumber (Chinese Long) v2cumedB039
MELO3C026289.2Melon (DHL92) v3.6.1medmedB065
MELO3C026289.2Bottle gourd (USVL1VR-Ls)lsimedB213
MELO3C026289.2Bottle gourd (USVL1VR-Ls)lsimedB268
MELO3C026289.2Watermelon (Charleston Gray)medwcgB219
MELO3C026289.2Watermelon (Charleston Gray)medwcgB226
MELO3C026289.2Watermelon (97103) v1medwmB253
MELO3C026289.2Silver-seed gourdcarmedB0375
MELO3C026289.2Silver-seed gourdcarmedB0505
MELO3C026289.2Silver-seed gourdcarmedB0989
MELO3C026289.2Cucumber (Chinese Long) v3cucmedB044
MELO3C026289.2Watermelon (97103) v2medwmbB220
MELO3C026289.2Wax gourdmedwgoB280
MELO3C026289.2Wax gourdmedwgoB291