MELO3C026141 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026141
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ADP-ribosylation factor, putative, expressed
Location	chr3 : 18558847 .. 18560942 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTGACCTTCACCAACCTTTTCAATAGGCTTTTTGCAAAGAAGGAGATGCAGATTTTGATGGTTGGTCTTGATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACAATGGGTGTGTTCTTTGATTACTAACCCTTTTTTTCATGAAATCTCGAGTTTTGATTGCTTAATTTGTATTATTGTTATTCATTTATGAAATTCCTTCTTCAGGTGGCATTGGCGGGTACCTCCTTTTCGTTTCTTCAGAGAGTTGGTGCTGTGGTGGTATGTGGTGTGTGTTTGGAGCTGGATTTCTATTCACTAATTTGAATGTTTACTTAATTTAAACGTGATTTCTTTTGTTTATTTGTAGCGTAATGGGGGCAAGCTATTTGCTGTAGGGAGTGGTGCATCTGTGGTAAGTCAGTTGTTTTCCCCCTTTGTTCTGCCTTTGGCTTGATTTAAGCAATTACGTTGCCTCTTAACTATTACTCGGTGCTGTCACTGCATTATGGTCTGTAGATAATATAATATTAAATTTATCGTGGTATGTGGTTCGAAGGATTTCTTTTCGTTAAAACCTCTTCCATGTTATTTCATCCCAAAGTTAATATTAGCTTAAGCTTTTTGATCAATGGTGATTTAGGATGGACTGGGAACATTTGAAATCACTTTTATCAAACTCCATATGGTTTAATTGAATTTGGTATGGGAACATTTTTTTGTACTGAGGTCAATATATACCTATACTGTTATACCACATGCATATGTTTAGTGTTGGTTTTGTGCTTGTTCTGAACTCCCTATCTCTTAAAATAAAACAGTAATGAAGTCATTTGTAAGTACACCTATCGCAACTAGTTATGCTTTAGCTTGGTTTCAGCAATTTTCTTGAATCTTAAACATACCCAATAAATTTTGGAATCTTGATGACAAAAACTTCAGATCATGTGAAATTTTGTGGTTTCTAACAGTATTTTAGGACTAGGAGTAGGAGATTTCGGTGTTTTTGCACTTCTTTTGAACTTTGTGGTTCTATCTAAGAAATAGTTATGAAGTAATTTGTGAAGAGAGAGAGTGAGTTTTAGTTTGTTTTATATGAAGTACTTTTGAAGTATAACAATGGAAAATATGAGAAAATAGAGGAGAGTTGAAGGCTTTTGTAGGGAATTTTGTCGGGTTGCTCTTTGGGAAAAGGACTTTTTTTTTTTAATTCAAATTTGAACAAAAAATAGTGTGATGAAGTATTAATTAGTGGACACTAATGAGTGACCATTTTAAGTCAAGTGAAAAAGATAAGTTTAGTGATCTTATATTAATCATCTATTAGATATTTATTAGAATTTTTTCTTTCATACCTATTCTCTCCAACACGGGTGAGCATTAATGATCGAAATCCAATTTTAGACCAAACCTCTACCTAACTTACTATAGTTAGTTTAGTAATGTTTAAATCTATCGGTCGATATAAACCTTCGAATTTTTTCTTAAGTAGTGTGAGAGTGGGTTTTGGTTCATAAAGGATTCCCTAAAATAAACGTTAAACCATATAATGTGTAACATATAGCCTAAAAGAAATTAAAAGCTGTGTTGGGAGCTTTAATTTGGTGTTTGTAGCCTTGCAGCTATATGTTGCTGCTGTCTAATGAGCATATAGAAAAAAGTCGAGTGTTTGTTATAATGGTAAGAATCAACTTTAAATCATGAGTATATTGTAATTCTATTTATAATTTTCTTGCTCTATCATATTGTATCAGTAAAAAGCTGGATTACTTGTTGTACAATATCATTTTCTGCCTCACTTTTCAATGTTTAGTATATTTGTTATTCTTAATGTCATTTGTCGTAATGTAGTCCATATTCCTAGCATGTGCTTCCTTTTCAGCTCTAATTCGAAAAGCCTATTGCCTCTCAAGTTTTAATTTTCACTATTCACCATTGGCCTCCTACTTAGAGTTGCACATATATTAGTATATTATTATGTGTGATGCACTGAATATTTGATGATTTGCTAATGCTAGGTTAAAATTGCCAAGTGGAACCCTGAAAAGGATTTGCTAGCCATGGTCACGAAAGACTAA

mRNA sequence

ATGGGATTGACCTTCACCAACCTTTTCAATAGGCTTTTTGCAAAGAAGGAGATGCAGATTTTGATGGTTGGTCTTGATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTGGCATTGGCGGGTACCTCCTTTTCGTTTCTTCAGAGAGTTGGTGCTGTGGTGCGTAATGGGGGCAAGCTATTTGCTGTAGGGAGTGGTGCATCTGTGGTTAAAATTGCCAAGTGGAACCCTGAAAAGGATTTGCTAGCCATGGTCACGAAAGACTAA

Coding sequence (CDS)

ATGGGATTGACCTTCACCAACCTTTTCAATAGGCTTTTTGCAAAGAAGGAGATGCAGATTTTGATGGTTGGTCTTGATGCTGCTGGAAAGACCACGATCTTGTACAAGCTCAAGCTCGGAGAAATTGTGGCATTGGCGGGTACCTCCTTTTCGTTTCTTCAGAGAGTTGGTGCTGTGGTGCGTAATGGGGGCAAGCTATTTGCTGTAGGGAGTGGTGCATCTGTGGTTAAAATTGCCAAGTGGAACCCTGAAAAGGATTTGCTAGCCATGGTCACGAAAGACTAA

Protein sequence

MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGTSFSFLQRVGAVVRNGGKLFAVGSGASVVKIAKWNPEKDLLAMVTKD*

Homology

[Close]

BLAST of MELO3C026141 vs. Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 41/48 (85.42%), Postives = 41/48 (85.42%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 41/48 (85.42%), Postives = 41/48 (85.42%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 41/48 (85.42%), Postives = 41/48 (85.42%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-14
Identity = 40/48 (83.33%), Postives = 41/48 (85.42%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGL+FT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-14
Identity = 40/48 (83.33%), Postives = 41/48 (85.42%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGL+FT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TrEMBL
Match: A0A0C9QUA4_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_9363_1090 transcribed RNA sequence OS=Wollemia nobilis PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-13
Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LFNRLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFNRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TrEMBL
Match: A0A0C4BET2_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-13
Identity = 47/70 (67.14%), Postives = 51/70 (72.86%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGTSFSFLQRVGAVV 60
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T    L    A +
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKLLSAFSASM 60

Query: 61 RNGGKLFAVG 71
             G +F VG
Sbjct: 61 L--GHVFNVG 68

[Close]

BLAST of MELO3C026141 vs. TrEMBL
Match: V7CGW9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G070500g PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TrEMBL
Match: M0SKE8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTRLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TrEMBL
Match: S8CEN5_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_09462 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TAIR10
Match: AT5G14670.1 (AT5G14670.1 ADP-ribosylation factor A1B)

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-15
Identity = 40/48 (83.33%), Postives = 40/48 (83.33%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGL FT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 77.0 bits (188), Expect = 6.9e-15
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGL+F  LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1)

HSP 1 Score: 77.0 bits (188), Expect = 6.9e-15
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGL+F  LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 77.0 bits (188), Expect = 6.9e-15
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGL+F  LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-14
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGL+F  LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. NCBI nr
Match: gi|976911137|gb|KVH97795.1| (Small GTPase superfamily, ARF/SAR type [Cynara cardunculus var. scolymus])

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. NCBI nr
Match: gi|769815334|ref|XP_011622282.1| (PREDICTED: ADP-ribosylation factor 2 [Amborella trichopoda])

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. NCBI nr
Match: gi|475592749|gb|EMT22177.1| (ADP-ribosylation factor [Aegilops tauschii])

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 24 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 71

[Close]

BLAST of MELO3C026141 vs. NCBI nr
Match: gi|573926502|ref|XP_006650781.1| (PREDICTED: ADP-ribosylation factor 1-like [Oryza brachyantha])

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

[Close]

BLAST of MELO3C026141 vs. NCBI nr
Match: gi|661882967|emb|CDP13175.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-12
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1


Query: 1  MGLTFTNLFNRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIVALAGT 49
          MGLTFT LF+RLFAKKEM+ILMVGLDAAGKTTILYKLKLGEIV    T
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPT 48

The following BLAST results are available for this feature:

BLAST of MELO3C026141 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARF2_ORYSJ	1.1e-14	85.42	ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2	[more]
ARF_MAIZE	1.1e-14	85.42	ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2	[more]
ARF1_ORYSJ	1.1e-14	85.42	ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 S...	[more]
ARF_VIGUN	3.2e-14	83.33	ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3	[more]
ARF1_DAUCA	3.2e-14	83.33	ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2	[more]

BLAST of MELO3C026141 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0C9QUA4_9SPER	3.2e-13	87.50	TSA: Wollemia nobilis Ref_Wollemi_Transcript_9363_1090 transcribed RNA sequence ...	[more]
A0A0C4BET2_WHEAT	3.2e-13	67.14	Uncharacterized protein OS=Triticum aestivum PE=4 SV=1	[more]
V7CGW9_PHAVU	1.2e-12	85.42	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G070500g PE=3 SV=1	[more]
M0SKE8_MUSAM	1.2e-12	85.42	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
S8CEN5_9LAMI	1.2e-12	85.42	Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_09462 PE=3 SV=1	[more]

BLAST of MELO3C026141 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14670.1	2.4e-15	83.33	ADP-ribosylation factor A1B	[more]
AT1G70490.1	6.9e-15	81.25	Ras-related small GTP-binding family protein	[more]
AT1G23490.1	6.9e-15	81.25	ADP-ribosylation factor 1	[more]
AT1G10630.1	6.9e-15	81.25	ADP-ribosylation factor A1F	[more]
AT2G47170.1	1.2e-14	81.25	Ras-related small GTP-binding family protein	[more]

BLAST of MELO3C026141 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|976911137\|gb\|KVH97795.1\|	1.8e-12	85.42	Small GTPase superfamily, ARF/SAR type [Cynara cardunculus var. scolymus]	[more]
gi\|769815334\|ref\|XP_011622282.1\|	1.8e-12	85.42	PREDICTED: ADP-ribosylation factor 2 [Amborella trichopoda]	[more]
gi\|475592749\|gb\|EMT22177.1\|	1.8e-12	85.42	ADP-ribosylation factor [Aegilops tauschii]	[more]
gi\|573926502\|ref\|XP_006650781.1\|	1.8e-12	85.42	PREDICTED: ADP-ribosylation factor 1-like [Oryza brachyantha]	[more]
gi\|661882967\|emb\|CDP13175.1\|	1.8e-12	85.42	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006689	Small_GTPase_ARF/SAR
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005525	GTP binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU43364	melon EST collection version 4.0	transcribed_cluster
MU51139	melon EST collection version 4.0	transcribed_cluster
MU51159	melon EST collection version 4.0	transcribed_cluster
MU65909	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026141T1	MELO3C026141T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU43364	MU43364	transcribed_cluster
MU51159	MU51159	transcribed_cluster
MU51139	MU51139	transcribed_cluster
MU65909	MU65909	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 6..49 score: 8.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 1..44 score: 2.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..48 score: 8.4
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..41 score: 6.3
None	No IPR available	PANTHER	PTHR11711:SF181	ADP-RIBOSYLATION FACTOR A1F	coord: 1..41 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026141	Cucumber (Chinese Long) v3	cucmeB478
MELO3C026141	Cucumber (Chinese Long) v3	cucmeB489
MELO3C026141	Watermelon (97103) v2	mewmbB304
MELO3C026141	Wax gourd	mewgoB340
MELO3C026141	Cucumber (Gy14) v1	cgymeB590
MELO3C026141	Cucumber (Gy14) v1	cgymeB592
MELO3C026141	Wild cucumber (PI 183967)	cpimeB468
MELO3C026141	Wild cucumber (PI 183967)	cpimeB479
MELO3C026141	Cucumber (Chinese Long) v2	cumeB418
MELO3C026141	Watermelon (97103) v1	mewmB304
MELO3C026141	Bottle gourd (USVL1VR-Ls)	lsimeB473
MELO3C026141	Cucumber (Gy14) v2	cgybmeB409
MELO3C026141	Cucumber (Gy14) v2	cgybmeB421