MELO3C025975 (gene) Melon (DHL92) v3.5.1

NameMELO3C025975
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSterile alpha motif domain-containing protein 11
Locationchr11 : 13267751 .. 13270659 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCGAGGGAATGGAATTGAAGAAAGAGAAAAAAAGAGAAGAAAAAATAATGAAATGATCAAAACCCTTCTTCCATTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCAACTCTCAACTCTCTGCTCACAACTCTCAACTCTCAACTCTCAAACATCATCATCAACAACAACAGCAACAACCCTCCGCTCCTTCTCTTTGTTTCAACTTCTGTTTCTCAATCAAATGTAGAGAAATTTCCTCTGACCTACCTTTTCTTCTCACCAACAACATCAACAACGAGGTGAATTTCAACTTCTCTCTCACTCACTTTCATCAATTTCTTCTTTATCACCTCAATTTCTGAAGCGATTTCTTTTCAATTTTTAGGTTTTCTGAAATTCCGCTTCACCTCATAGGGAGATGAACAAGGAGCAGCGACCTGAACCTCTTGATTTCTTCATTTGGACTGTTGAGGTATTTCCAAATCATACCTCCTCCTTCGTTTTCGATCTTTTCTGTTAAGATCTTTGACTCCTTCGCCTTTCTACTTCAAAATCTGATTGGTTCTGTGTTAATTACAGTGTTGGTTTGTGAGGTCTGAAATTGATGCCTATTCACTGCTCTACCCTTTCTCATTCATTGCTTATTCCAGTATTTGATAGTCATACAGTGCTTTCTTTTGTTTTTTTCTCTTCTGTTTATTAATGGTAACGTGTGATTACTGGATCAATGAGGTTTGATTGGTGTCTAATTTTTTTTTTTCCAATTGTGTATGTTATGATTAGGATGTTGGTGTTTCGTTAGCCACCGAAGGCTTTTGTAACTAATTGTTAATTGTGAAATGAATTTATTGATAGTCCCTAATGTAGCTAGGAGCTTGATTCTAAAATATCACTTTCTAGAATTCATTTAAACACGCAAAGATCTGTTTATTGCACTAGGATTTGTTTTCCTTCCTTTTTGGAATTTTTTACTTTTCCTTGTTGTAGTTCCATTTCATCTTCTTCTTTATGATTCCCTTTGTGAACTTTGTAATTAGCTGGAAATCTTGAAAATGATTCTTATAAATCTTGAATATATGAAATTACTTTTCGGGGAACTAAAAAATTTACATGGGCAATGTCATAGTGCTTCTATGTTCTCCGTTTTCAGTATCCTTTCACATAATTTCTTAGCTTCTTCAAGTGCAATAATGTGTGAAGATATCATTTTAAACTTCTCCCTGTCCTTTCAAGTTGGAGTGTTTATGTTCCCATTGCTTAGCTTGATACTTGTGTAATCTTCTGGAAACATATCATCATTCTTATTATATGGGGTTGAAGAAGATATCATTACATGGAAAAAGATATTTTCAGCATTTGGACTATACATCATATCACATCTTGGGTTAAAATTTTAACAATAAATGTAACTAAATTTGTTTTATAATGTGCCTCCTGCATGCTTATTACAACGCTTTTTCCCTTTAGGATGTTGGTTTGTGGTTGGAAGAGATAAATCTTGGAGGGTATCGCCAGACTTTTAAAGAAAATGGGGTCAATGGTGAGTATCTCGAAGGGATGTCAATGTTCACGACCGAACAGATTCTAAGGTTTATCAGACGATGCCATATGAAATGGGGAGATTTCATCACACTTTGTAAGGAACTTCGACGAATTAAAGGTCTGTGTGCAAAACAACATTTCTTCTCTTTTGAATTGAAATTTATTAGGAAAAAGAACTCCCGAGGTGTCCTACTGCTACATTCAGATATTTCAGGAACTCTTACATATGGTTTGAAATTAATTAAATTCTAAACAGAACTAAATCCCCCAAATCTTAACTAAATGCATGCGAATTAGCATATTTTACAACAGAGTAGGAGTAAGCCTTTTTGTGGAACCTTCTTCAATGTCTCTTACCTTTTCTTTTCCCTCCGTTTTAAGCAGTCTGTGTTCGTCTTTAAAAGTTTGAAGCTGTAAATCAACTATTTATCTCCTTATTTGATGTATTTGCAATCTCCTGTTGTTATTAGCATGTTTCTGATAGTCATAGTTGAAAAATTGATGCACGCACTGGCTGTTATGCTAAGAGGGGGTTTGAGATAACTTTTGGAGCAGCCACTGTACATCTTTTTCCTCCTTTTCCCCCTTTAGATTATAAGAAACATTAGGCTAGTAGCTTTTTTTCCTTTTTGACAGAAGTGAAAGAATGTACGATGGCATACAAGAACACAAGTCCATAAAAAAAGAAGTTCAAATGTTACAAAAGAAATAGACCGCAAACCAAATTATTAGGCTATTTTAAGGTACTTTTAAGTACTCTTAGAAATATCAAAGCTACATTGAACTTTGTTTTTAATTCCAATGCAGTAATTTGATGTATATGTTTGCTTAACTTCGCTTTTGAAACATTAGAACTTTCAGAATCGCCATTCCAAAAGCAACCCTAACTATGTATGTCTGCTTTTCCAGTTGACATTAAGATTATGCTGTTTATTCTTTAAGTTATGTACTTCCAGTGGCTTGCTTGAAAGGGGAGCAAAAGGTACGTCGGCCATGGTGGGCACCATCATGCCTCTCTATGGTGTTTCTCAAGGTGGCTAAGCGTAACAGACAATCTCGAGTTGTTTCCTTGAAGCTGGAACCATAGAACCGAGATCAACTTATTTGTATGTGCTCATGTATTTCTTTTTATGCGTGAAGAATATAAAAGGTAGAGAAGAAACATATTAGTTTATCCTTTTCTAAAAAAATTTAATCGGTCAATATTACCTTTTCTTTTTTGTTTTGTTTTGTTTTTTCTTTTTTTCGTTTTTGTTTTTTTCCTTTGTTTAGAACTATGTCTATATATACAAGGTTTATGTGTTCAGTTTGGCGATCCCGCTTGAGGAAAAACAATGAAGCAACCAAGATCTTGTTGCAAATTATACAAGTTTTGCTCTTTTA

mRNA sequence

GTGCGAGGGAATGGAATTGAAGAAAGAGAAAAAAAGAGAAGAAAAAATAATGAAATGATCAAAACCCTTCTTCCATTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCAACTCTCAACTCTCTGCTCACAACTCTCAACTCTCAACTCTCAAACATCATCATCAACAACAACAGCAACAACCCTCCGCTCCTTCTCTTTGTTTCAACTTCTGTTTCTCAATCAAATGTAGAGAAATTTCCTCTGACCTACCTTTTCTTCTCACCAACAACATCAACAACGAGGTTTTCTGAAATTCCGCTTCACCTCATAGGGAGATGAACAAGGAGCAGCGACCTGAACCTCTTGATTTCTTCATTTGGACTGTTGAGGATGTTGGTTTGTGGTTGGAAGAGATAAATCTTGGAGGGTATCGCCAGACTTTTAAAGAAAATGGGGTCAATGGTGAGTATCTCGAAGGGATGTCAATGTTCACGACCGAACAGATTCTAAGGTTTATCAGACGATGCCATATGAAATGGGGAGATTTCATCACACTTTGTAAGGAACTTCGACGAATTAAAGTGGCTTGCTTGAAAGGGGAGCAAAAGGTACGTCGGCCATGGTGGGCACCATCATGCCTCTCTATGGTGTTTCTCAAGGTGGCTAAGCGTAACAGACAATCTCGAGTTGTTTCCTTGAAGCTGGAACCATAGAACCGAGATCAACTTATTTGTATGTGCTCATGTATTTCTTTTTATGCGTGAAGAATATAAAAGGTAGAGAAGAAACATATTAGTTTATCCTTTTCTAAAAAAATTTAATCGGTCAATATTACCTTTTCTTTTTTGTTTTGTTTTGTTTTTTCTTTTTTTCGTTTTTGTTTTTTTCCTTTGTTTAGAACTATGTCTATATATACAAGGTTTATGTGTTCAGTTTGGCGATCCCGCTTGAGGAAAAACAATGAAGCAACCAAGATCTTGTTGCAAATTATACAAGTTTTGCTCTTTTA

Coding sequence (CDS)

ATGAACAAGGAGCAGCGACCTGAACCTCTTGATTTCTTCATTTGGACTGTTGAGGATGTTGGTTTGTGGTTGGAAGAGATAAATCTTGGAGGGTATCGCCAGACTTTTAAAGAAAATGGGGTCAATGGTGAGTATCTCGAAGGGATGTCAATGTTCACGACCGAACAGATTCTAAGGTTTATCAGACGATGCCATATGAAATGGGGAGATTTCATCACACTTTGTAAGGAACTTCGACGAATTAAAGTGGCTTGCTTGAAAGGGGAGCAAAAGGTACGTCGGCCATGGTGGGCACCATCATGCCTCTCTATGGTGTTTCTCAAGGTGGCTAAGCGTAACAGACAATCTCGAGTTGTTTCCTTGAAGCTGGAACCATAG
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46593melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025975T2MELO3C025975T2mRNA
MELO3C025975T1MELO3C025975T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46593MU46593transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainPFAMPF07647SAM_2coord: 15..51
score: 8.
IPR001660Sterile alpha motif domainPROFILEPS50105SAM_DOMAINcoord: 15..50
score: 11
IPR013761Sterile alpha motif/pointed domainGENE3DG3DSA:1.10.150.50coord: 15..49
score: 2.
IPR013761Sterile alpha motif/pointed domainunknownSSF47769SAM/Pointed domaincoord: 7..85
score: 3.29
NoneNo IPR availablePANTHERPTHR24176FAMILY NOT NAMEDcoord: 1..125
score: 9.7

The following gene(s) are paralogous to this gene:

None