Carg16099 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAGAGAGAGAGAGAGAGAATTGAAGAGAGAAAGAGGAAATCATCAAATGATCAAAACCCTCTCAACGCTCTCTTTCATTGATTTCACTTTTCCATCTCTCGTGCGCCACTTCTGTTATGAATCAAATGTAGAGAACTTTTCGTGACCTAGATTTTTCATTTCAGGAACAAGAACAAGAAGAAGGAGAAATTCAACTTCTGTCTGGTTAGCTTCCTCAATTTCTACTTTATATGTCTTCGTTTTCTTTTTAGTTTTCTGTGAACTGAATTTTGTCTTTGAAATCATGATGAGATTTTTTGTTCTCGACTTCGTGAATTTAGGTTATCTGAAACTCGGGAGGACCTGATAGGGAGATGAACAAGGATCAGCGACCGGAACCTCTTGATTTCTTCATTTGGACTGTTGAGGTATCTCCTAATCCTCTCGCATCTCATACATCGTCTTTGATTTTGGATCTTTTGTGCAAAGATCTTAAACTGCAATTCTTCGTTGTTTGGGATTCTGCTTGAAAATCTGAACGGTTATGCGTTGAGAGTATTGGTATGGGGAGTTTGAAATTGATGGATACTGTAACCTTCCTCATTGATTGCTTATTCAAGTATTTGATCGTGATTCAGTGATACCTTCTTTTTTCTTTGTTTGTAATCTTCAATTTTTTTGATTACTGGATCAATGAGATTTGGTTATTGTGTAATTTTTTTTCCAACTCTGTTTGTTAAGATTACGGAATTAGTGTTTTGTTAGCAACTGAAAACTTTTCGAAGTAGTTGTAGATAGTGAAATGAAATAATTGAATTTATCGTCAGTCAGTGATATTTTCCTTCCCATTTGAAGTTTTGGACTTTTCCTTGTTATAGCTCCTTCCTCTTCCTTTCTTTTCTCTTTCTAGTTTTGAACTTAACAGCTAGCTTGAACTCTCCTAAATTTATTTCTCAGAAATTTTGAGTATAAGAAATTATGTTTGATGGAACTAAAGAAATTAAATTGGCAATGTCATACTGTTTCTATGTTCTTCGTTCTCAGCATGCTTCTGGATGTCACATAGTTTATTAGCTTCTTGGAGTGCAAAAATTTGTGAACATATCTTTCCAAACTGCACCCTGTTCGTCCAAGTTGGAGTGTTTATGTGTTACCATTTGGACTATACATCATATCACATTTCTCTGGATAAAATTTAACTGTGAATTGAATGAAATTTGATTTATAATATGCCTCCTTTATGCTGATTATTACGTTTTTTTTTTTAAATTTTTTTTTCCAGGATGTTGGTTTGTGGTTGGAAGAAATAAGTCTTGGAAGCTATCGCCAGATTTTTAAAGAAAATGGGGTCAATGGGGAGTATCTTGAAGGCATGTCAATGTTCACAACTGAACAGATTCTAAGGTTTATCAGACGATGCCATATGAAATGGGGAGACTTTATTACACTTTGTAAGGAACTCCGACGAATTAAAGGTCTGTGCGCGAGGCAACTTTTCTTATCTTTTTAATTCAATCTTTTTTAGGGAAAAACAATTCAGGGTTGTCTTGCTGCTACTTCCATTTCAGAAACTCCTGAATATGATTATAATGAATTAAATTAAAA AAAGAGAGAGAGAGAGAGAGAATTGAAGAGAGAAAGAGGAAATCATCAAATGATCAAAACCCTCTCAACGCTCTCTTTCATTGATTTCACTTTTCCATCTCTCGTGCGCCACTTCTGTTATGAATCAAATGTAGAGAACTTTTCGTGACCTAGATTTTTCATTTCAGGAACAAGAACAAGAAGAAGGAGAAATTCAACTTCTGTCTGGTTATCTGAAACTCGGGAGGACCTGATAGGGAGATGAACAAGGATCAGCGACCGGAACCTCTTGATTTCTTCATTTGGACTGTTGAGGATGTTGGTTTGTGGTTGGAAGAAATAAGTCTTGGAAGCTATCGCCAGATTTTTAAAGAAAATGGGGTCAATGGGGAGTATCTTGAAGGCATGTCAATGTTCACAACTGAACAGATTCTAAGGTTTATCAGACGATGCCATATGAAATGGGGAGACTTTATTACACTTTGTAAGGAACTCCGACGAATTAAAGGTCTGTGCGCGAGGCAACTTTTCTTATCTTTTTAATTCAATCTTTTTTAGGGAAAAACAATTCAGGGTTGTCTTGCTGCTACTTCCATTTCAGAAACTCCTGAATATGATTATAATGAATTAAATTAAAA ATGAACAAGGATCAGCGACCGGAACCTCTTGATTTCTTCATTTGGACTGTTGAGGATGTTGGTTTGTGGTTGGAAGAAATAAGTCTTGGAAGCTATCGCCAGATTTTTAAAGAAAATGGGGTCAATGGGGAGTATCTTGAAGGCATGTCAATGTTCACAACTGAACAGATTCTAAGGTTTATCAGACGATGCCATATGAAATGGGGAGACTTTATTACACTTTGTAAGGAACTCCGACGAATTAAAGGTCTGTGCGCGAGGCAACTTTTCTTATCTTTTTAA MNKDQRPEPLDFFIWTVEDVGLWLEEISLGSYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKGLCARQLFLSF
BLAST of Carg16099 vs. NCBI nr
Match: XP_022943906.1 (uncharacterized protein LOC111448490 isoform X1 [Cucurbita moschata] >XP_022986114.1 uncharacterized protein LOC111483956 [Cucurbita maxima]) HSP 1 Score: 181.8 bits (460), Expect = 1.1e-42 Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Carg16099 vs. NCBI nr
Match: XP_023512133.1 (uncharacterized protein LOC111776944 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.8 bits (460), Expect = 1.1e-42 Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Carg16099 vs. NCBI nr
Match: XP_022140752.1 (uncharacterized protein LOC111011338 [Momordica charantia] >XP_022140753.1 uncharacterized protein LOC111011338 [Momordica charantia]) HSP 1 Score: 179.1 bits (453), Expect = 6.9e-42 Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Carg16099 vs. NCBI nr
Match: XP_022943907.1 (uncharacterized protein LOC111448490 isoform X2 [Cucurbita moschata]) HSP 1 Score: 179.1 bits (453), Expect = 6.9e-42 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Carg16099 vs. NCBI nr
Match: XP_022947536.1 (uncharacterized protein LOC111451372 [Cucurbita moschata] >XP_022971132.1 uncharacterized protein LOC111469897 [Cucurbita maxima] >XP_023534569.1 uncharacterized protein LOC111796106 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 178.7 bits (452), Expect = 9.0e-42 Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Carg16099 vs. TAIR10
Match: AT3G07760.1 (Sterile alpha motif (SAM) domain-containing protein) HSP 1 Score: 156.8 bits (395), Expect = 6.7e-39 Identity = 71/87 (81.61%), Postives = 76/87 (87.36%), Query Frame = 0
BLAST of Carg16099 vs. Swiss-Prot
Match: sp|P18160|SPLA_DICDI (Dual specificity protein kinase splA OS=Dictyostelium discoideum OX=44689 GN=splA PE=1 SV=3) HSP 1 Score: 45.4 bits (106), Expect = 3.9e-04 Identity = 15/36 (41.67%), Postives = 25/36 (69.44%), Query Frame = 0
BLAST of Carg16099 vs. TrEMBL
Match: tr|A0A0A0KAT3|A0A0A0KAT3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G111390 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.3e-41 Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Carg16099 vs. TrEMBL
Match: tr|B3XZN9|B3XZN9_CUCME (Downward leaf curling protein OS=Cucumis melo OX=3656 GN=CmDLC PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 5.1e-41 Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of Carg16099 vs. TrEMBL
Match: tr|A0A0J8B559|A0A0J8B559_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_013620 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 5.1e-41 Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Carg16099 vs. TrEMBL
Match: tr|A0A0B2SHY7|A0A0B2SHY7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_025981 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40 Identity = 80/84 (95.24%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Carg16099 vs. TrEMBL
Match: tr|A0A2R6QT90|A0A2R6QT90_ACTCH (Dual specificity protein kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14926 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40 Identity = 79/87 (90.80%), Postives = 82/87 (94.25%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |