MELO3C025584 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025584
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	NAC domain-containing protein 89
Location	chr12 : 14013403 .. 14022982 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTGGTGCTGAGAATCGGGTTTCTAGGGAAGTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACTGATGAGGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGGCATGAGAAGAGCGTTGAAGTCATTGCGGAGGTTGAAATTTACAAGTACGAACCCTGGGACTTACCTGGTCAGTTCTGCTTTTAATGGTCTGAATTATCTTTGCTGCTTCATTCTTTTCAATTCGTTTGGGTGTTTTTTCTTCCTGGTGTATGATCAGGGGTTTTGTTTTTTTTTTTTTTTCCTCTTATTGTAAGTAGCCAAGTCTATCATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAAACGAGGAGAGCTACTGATTTAGGCTACTGGAAAGCCACAGGGAAAGAACGTAATGTAAAGTCAGGTTCTAATACTATTGGTACTAAGAGGACTCTGGTTTTCCATACTGGCCGTGCACCTAAAGGGGAAAGGACAGAGTGGATTATGCATGAATATAACACCAAAGATAAAGCTCAGGTAAGTTCTTCGTGTTTTAAACTAAAATTTGCTTTTGTTTTGTGTTATTGGATTTCAACTTGGAAAAATGATGATGGTTCTTGGAGCAAAATTGTTTTCATTTAA

mRNA sequence

ATGGCGGCTGGTGCTGAGAATCGGGTTTCTAGGGAAGTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACTGATGAGGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGGCATGAGAAGAGCGTTGAAGTCATTGCGGAGGTTGAAATTTACAAGTACGAACCCTGGGACTTACCTGCCAAGTCTATCATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAAACGAGGAGAGCTACTGATTTAGGCTACTGGAAAGCCACAGGGAAAGAACGTAATGTAAAGTCAGGTTCTAATACTATTGGTACTAAGAGGACTCTGGTTTTCCATACTGGCCGTGCACCTAAAGGGGAAAGGACAGAGTGGATTATGCATGAATATAACACCAAAGATAAAGCTCAGGTAAGTTCTTCGTGTTTTAAACTAAAATTTGCTTTTGTTTTGTGTTATTGGATTTCAACTTGGAAAAATGATGATGGTTCTTGGAGCAAAATTGTTTTCATTTAA

Coding sequence (CDS)

ATGGCGGCTGGTGCTGAGAATCGGGTTTCTAGGGAAGTGCAGCTTTCAATGGCGGTTTCGTCTATGTTTCCTGGTTTTCGCTTTTCGCCGACTGATGAGGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGGCATGAGAAGAGCGTTGAAGTCATTGCGGAGGTTGAAATTTACAAGTACGAACCCTGGGACTTACCTGCCAAGTCTATCATTCAATCAGATAATGAATGGTTCTTCTTCTCCCCTCGTGGAAAGAAGTACCCAAATGGTAATCAAACGAGGAGAGCTACTGATTTAGGCTACTGGAAAGCCACAGGGAAAGAACGTAATGTAAAGTCAGGTTCTAATACTATTGGTACTAAGAGGACTCTGGTTTTCCATACTGGCCGTGCACCTAAAGGGGAAAGGACAGAGTGGATTATGCATGAATATAACACCAAAGATAAAGCTCAGGTAAGTTCTTCGTGTTTTAAACTAAAATTTGCTTTTGTTTTGTGTTATTGGATTTCAACTTGGAAAAATGATGATGGTTCTTGGAGCAAAATTGTTTTCATTTAA

Protein sequence

MAAGAENRVSREVQLSMAVSSMFPGFRFSPTDEELISFYLKKKLEGHEKSVEVIAEVEIYKYEPWDLPAKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTIGTKRTLVFHTGRAPKGERTEWIMHEYNTKDKAQVSSSCFKLKFAFVLCYWISTWKNDDGSWSKIVFI*

Homology

[Close]

BLAST of MELO3C025584 vs. TrEMBL
Match: A0A0A0LYC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168870 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-88
Identity = 166/186 (89.25%), Postives = 172/186 (92.47%), Query Frame = 1


Query: 1   MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 60
           MNLS LQAHSSEQVDSTESNQKDAAE THV+S DHDQKD GSDDFYSDILKDDIINLDTA
Sbjct: 181 MNLSLLQAHSSEQVDSTESNQKDAAETTHVDSGDHDQKDCGSDDFYSDILKDDIINLDTA 240

Query: 61  PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 120
           P +GA DPLPLIFQRSDTERRSQHE +D FEWL NQGSANRRIRLKKREATGGKKLES K
Sbjct: 241 PLDGALDPLPLIFQRSDTERRSQHEGSDGFEWLPNQGSANRRIRLKKREATGGKKLESTK 300

Query: 121 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 180
           IGDCRNKVEKARLCSTEVC+SRLMN DSCGSI  GYYVRVVIF LLILMALFMSRW+VFG
Sbjct: 301 IGDCRNKVEKARLCSTEVCQSRLMNTDSCGSISLGYYVRVVIFVLLILMALFMSRWEVFG 360

Query: 181 MPKGLC 187
           +PKGLC
Sbjct: 361 IPKGLC 366

[Close]

BLAST of MELO3C025584 vs. TrEMBL
Match: W9RH24_9ROSA (NAC domain-containing protein 89 OS=Morus notabilis GN=L484_016315 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.3e-13
Identity = 66/184 (35.87%), Postives = 94/184 (51.09%), Query Frame = 1


Query: 4   SSLQAHSSEQVDS-TESNQKDAAEITHVESDDHDQKDFGSDD-FYSDILKDDIINLDTAP 63
           SS  ++S EQ+DS +ES+QK A+E+T  E     QKD+  DD F+++ILKDDII LD   
Sbjct: 209 SSYDSYSIEQIDSASESSQKLASEVTQPECSGQ-QKDYDDDDDFFAEILKDDIIKLDETL 268

Query: 64  FNGASDPLPL-IFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKR----------EA 123
            + A D  PL  F   + ++  Q  E  V + L  QG+ANRRIRLKK           E 
Sbjct: 269 ISAALDISPLAAFVPEEVQKSQQPGEAAVSQDLPFQGTANRRIRLKKETVRTNREKAMEN 328

Query: 124 TGGKKLESMKIGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMA 175
           T   K + +   + R   +++  CS  V  +R              ++ + +F LL  MA
Sbjct: 329 TASTKSDYLVGKNTRPNSKESPKCSASVLSAR---------TTASRHLILAVFLLLAFMA 382

[Close]

BLAST of MELO3C025584 vs. TrEMBL
Match: B9SCY9_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1282430 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-11
Identity = 59/180 (32.78%), Postives = 90/180 (50.00%), Query Frame = 1


Query: 4   SSLQAHSSEQVDS-TESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTAPF 63
           SS  +HS EQ+DS +ES+QK + E    ES    Q     +DFY+DILKDDI+ LD  PF
Sbjct: 206 SSYDSHSIEQIDSASESDQKLSNEAPLAESSCQQQDSDKEEDFYADILKDDIVKLDETPF 265

Query: 64  NGASDPLPLIFQRSDTERRSQHEENDVF--------EWLQNQGSANRRIRLKKREATGGK 123
           + A + LP I  +++T+ ++Q ++              + +QG ANRRI+L KR+A    
Sbjct: 266 SEAQELLPFIAGKAETQAQAQMQQPMGIIVSQAIPPNSIASQGIANRRIKL-KRQAPPAA 325

Query: 124 KLESMKIGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMS 175
             E    G    K E++  C   + + R +                ++F +L L+AL  S
Sbjct: 326 DAEPSGSG----KEEESPKCVVSMAKHRPI---------------FIVFIILTLLALLAS 365

[Close]

BLAST of MELO3C025584 vs. TrEMBL
Match: A0A061GVZ7_THECC (NAC domain protein, IPR003441, putative isoform 1 OS=Theobroma cacao GN=TCM_041332 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-10
Identity = 58/181 (32.04%), Postives = 92/181 (50.83%), Query Frame = 1


Query: 4   SSLQAHSSEQVDS-TESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTAPF 63
           SS  +HS EQ+DS +ES +K + ++   ES    +   G +D++++ILKDDII LD    
Sbjct: 215 SSYDSHSIEQIDSASESEEKHSNDVAPTESSTPQKDSDGEEDYFAEILKDDIIKLDETSL 274

Query: 64  NG-ASDPLPLIFQRSDTERRSQH-EENDVFEWLQNQGSANRRIRLKKR------EATGGK 123
           +    D L ++   SDTERR+Q   + +V      QG+A+RRI+L +       +A  G 
Sbjct: 275 SAMPPDSLSMVASTSDTERRTQQPRQENVPNASPFQGTASRRIKLWRPKGDILCDAASGS 334

Query: 124 KLESMKI-GDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFM 175
            +  + +      K+E++  C   +   R  N       LR  Y     F +L L+ALF+
Sbjct: 335 LVRELAVEKQSSPKIEESPKCLLSIFSPRTAN-------LRLIYAS---FVILTLLALFL 385

[Close]

BLAST of MELO3C025584 vs. TrEMBL
Match: A0A061GZN7_THECC (NAC domain-containing protein 74, putative isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_041332 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-10
Identity = 58/181 (32.04%), Postives = 92/181 (50.83%), Query Frame = 1


Query: 4   SSLQAHSSEQVDS-TESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTAPF 63
           SS  +HS EQ+DS +ES +K + ++   ES    +   G +D++++ILKDDII LD    
Sbjct: 284 SSYDSHSIEQIDSASESEEKHSNDVAPTESSTPQKDSDGEEDYFAEILKDDIIKLDETSL 343

Query: 64  NG-ASDPLPLIFQRSDTERRSQH-EENDVFEWLQNQGSANRRIRLKKR------EATGGK 123
           +    D L ++   SDTERR+Q   + +V      QG+A+RRI+L +       +A  G 
Sbjct: 344 SAMPPDSLSMVASTSDTERRTQQPRQENVPNASPFQGTASRRIKLWRPKGDILCDAASGS 403

Query: 124 KLESMKI-GDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFM 175
            +  + +      K+E++  C   +   R  N       LR  Y     F +L L+ALF+
Sbjct: 404 LVRELAVEKQSSPKIEESPKCLLSIFSPRTAN-------LRLIYAS---FVILTLLALFL 454

[Close]

BLAST of MELO3C025584 vs. NCBI nr
Match: gi|659127324|ref|XP_008463642.1| (PREDICTED: NAC domain-containing protein 89-like isoform X2 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 6.2e-102
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1


Query: 1   MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 60
           MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA
Sbjct: 181 MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 240

Query: 61  PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 120
           PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK
Sbjct: 241 PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 300

Query: 121 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 180
           IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG
Sbjct: 301 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 360

Query: 181 MPKGLC 187
           MPKGLC
Sbjct: 361 MPKGLC 366

[Close]

BLAST of MELO3C025584 vs. NCBI nr
Match: gi|659127326|ref|XP_008463643.1| (PREDICTED: NAC domain-containing protein 89-like isoform X3 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 6.2e-102
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1


Query: 1   MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 60
           MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA
Sbjct: 142 MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 201

Query: 61  PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 120
           PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK
Sbjct: 202 PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 261

Query: 121 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 180
           IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG
Sbjct: 262 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 321

Query: 181 MPKGLC 187
           MPKGLC
Sbjct: 322 MPKGLC 327

[Close]

BLAST of MELO3C025584 vs. NCBI nr
Match: gi|659127328|ref|XP_008463645.1| (PREDICTED: NAC domain-containing protein 89-like isoform X4 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 6.2e-102
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1


Query: 1   MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 60
           MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA
Sbjct: 141 MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 200

Query: 61  PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 120
           PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK
Sbjct: 201 PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 260

Query: 121 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 180
           IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG
Sbjct: 261 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 320

Query: 181 MPKGLC 187
           MPKGLC
Sbjct: 321 MPKGLC 326

[Close]

BLAST of MELO3C025584 vs. NCBI nr
Match: gi|659127330|ref|XP_008463646.1| (PREDICTED: NAC domain-containing protein 89-like isoform X5 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 6.2e-102
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1


Query: 1   MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 60
           MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA
Sbjct: 128 MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 187

Query: 61  PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 120
           PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK
Sbjct: 188 PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 247

Query: 121 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 180
           IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG
Sbjct: 248 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 307

Query: 181 MPKGLC 187
           MPKGLC
Sbjct: 308 MPKGLC 313

[Close]

BLAST of MELO3C025584 vs. NCBI nr
Match: gi|659127332|ref|XP_008463647.1| (PREDICTED: NAC domain-containing protein 89-like isoform X6 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 6.2e-102
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1


Query: 1   MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 60
           MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA
Sbjct: 127 MNLSSLQAHSSEQVDSTESNQKDAAEITHVESDDHDQKDFGSDDFYSDILKDDIINLDTA 186

Query: 61  PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 120
           PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK
Sbjct: 187 PFNGASDPLPLIFQRSDTERRSQHEENDVFEWLQNQGSANRRIRLKKREATGGKKLESMK 246

Query: 121 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 180
           IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG
Sbjct: 247 IGDCRNKVEKARLCSTEVCESRLMNPDSCGSILRGYYVRVVIFFLLILMALFMSRWKVFG 306

Query: 181 MPKGLC 187
           MPKGLC
Sbjct: 307 MPKGLC 312

The following BLAST results are available for this feature:

BLAST of MELO3C025584 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYC3_CUCSA	1.2e-88	89.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168870 PE=4 SV=1	[more]
W9RH24_9ROSA	8.3e-13	35.87	NAC domain-containing protein 89 OS=Morus notabilis GN=L484_016315 PE=4 SV=1	[more]
B9SCY9_RICCO	2.7e-11	32.78	Transcription factor, putative OS=Ricinus communis GN=RCOM_1282430 PE=4 SV=1	[more]
A0A061GVZ7_THECC	1.0e-10	32.04	NAC domain protein, IPR003441, putative isoform 1 OS=Theobroma cacao GN=TCM_0413...	[more]
A0A061GZN7_THECC	1.0e-10	32.04	NAC domain-containing protein 74, putative isoform 3 (Fragment) OS=Theobroma cac...	[more]

BLAST of MELO3C025584 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127324\|ref\|XP_008463642.1\|	6.2e-102	100.00	PREDICTED: NAC domain-containing protein 89-like isoform X2 [Cucumis melo]	[more]
gi\|659127326\|ref\|XP_008463643.1\|	6.2e-102	100.00	PREDICTED: NAC domain-containing protein 89-like isoform X3 [Cucumis melo]	[more]
gi\|659127328\|ref\|XP_008463645.1\|	6.2e-102	100.00	PREDICTED: NAC domain-containing protein 89-like isoform X4 [Cucumis melo]	[more]
gi\|659127330\|ref\|XP_008463646.1\|	6.2e-102	100.00	PREDICTED: NAC domain-containing protein 89-like isoform X5 [Cucumis melo]	[more]
gi\|659127332\|ref\|XP_008463647.1\|	6.2e-102	100.00	PREDICTED: NAC domain-containing protein 89-like isoform X6 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom
IPR003441	NAC-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025584T3	MELO3C025584T3	mRNA
MELO3C025584T2	MELO3C025584T2	mRNA
MELO3C025584T1	MELO3C025584T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 24..147 score: 3.2
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 22..173 score: 51
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 13..155 score: 1.44
None	No IPR available	PANTHER	PTHR31989	FAMILY NOT NAMED	coord: 5..146 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025584	Csa1G168870	Cucumber (Chinese Long) v2	cumeB015
MELO3C025584	Cla011058	Watermelon (97103) v1	mewmB173
MELO3C025584	ClCG01G011710	Watermelon (Charleston Gray)	mewcgB133
MELO3C025584	Cla97C01G011320	Watermelon (97103) v2	mewmbB136
MELO3C025584	CSPI01G15020	Wild cucumber (PI 183967)	cpimeB030
MELO3C025584	CmaCh18G006440	Cucurbita maxima (Rimu)	cmameB367
MELO3C025584	CmoCh13G003790	Cucurbita moschata (Rifu)	cmomeB182
MELO3C025584	Cp4.1LG00g01680	Cucurbita pepo (Zucchini)	cpemeB004
MELO3C025584	CsGy1G014800	Cucumber (Gy14) v2	cgybmeB028
MELO3C025584	CsaV3_1G015130	Cucumber (Chinese Long) v3	cucmeB030
MELO3C025584	CsaV3_UNG232170	Cucumber (Chinese Long) v3	cucmeB095

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025584	Cucumber (Gy14) v1	cgymeB526
MELO3C025584	Cucurbita maxima (Rimu)	cmameB195