MELO3C025219 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025219
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNon-specific lipid-transfer protein
Locationchr8 : 26162525 .. 26163796 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACTCAAAACTCATCTACAAACTCCTCCAAATTTCTATTTACTAATTTTCGTAAACGCATCATGGCAAGTAACTTAATCACGATTCTAAAGTTGGGTTTAACTGTAACACTTCTCTACGCCGTGATAGGTGGAGGGGTGACGACAGAGGCAACCGTAACGTGCAACCAAGTGGTCTCCAATTTGAGTCCATGTATTTCGTACGTGACGGGCGGAGGATCCCCGTCATTTAACTGTTGCAGTGGTGTGAGACAGTTGAACAAGGCAGCTCAGACAACGCCGGATAGACAGGACGTATGTCGGTGCTTGAAATCATTGATCAATGGCGTTACGTATAATGGCCAAAATGTTGCCAATGCTGCTGCTCTTCCGACCAAGTGTGGCGTCAATCTTCCCTACACTATCAACCCCAATGCCGACTGTAGCACGTAATATATTTCTCTCTCTAAATTTTTATGTTACATGATCTTTTGATTTGAGTCTAAGTGTTGAGTACAGTTTTCATTTTCTTCATATTTTCAACTATGCATCTTCAGTTTAATTTTCACTTTTACACTTAGTTCTGAGTTTTTTTAAAAAAACTTATTTGGTTACATAATTTTCAAAAATTTACATTTACACTCTTTAATATTAATGCTTACTTTATTATTATGTTTAACCTTTACATAACAAAACAATTTAAAATGAAGAGTTCACACTGATCTGAATTATAAATACTTTAATATCTTTAAATTAGTTGTGATAAAACATCAAACATAAATGCCTAAAATGAAAACTAAAATGTATAAAATTTTTAAACCTAAGAATGAAATAAAAACTTTAGTTCGAAAGTAAAAACGGTAAGATGAATAATTTGAAAATTGGTCGAAAATCTCAAAACTCAACCAAGATTTTTTTTTTTCCTTATTTTGTACGTATTTGTTAACTTTATTTAGTTTAAGAAAGTTCTAATTAATTTACCTGGGAATTATTATTACTTTGCAGCATTAAAATGTGAGGAAAATCAAGCAGCTACACTGCAAGACGATGTCGTATCGATGGAAGAATAAATGGAGAGAGCATTTTGCTATGAACAAATTATGAACTTTGTTTTGAAATATTGTCTACTTGAAAACCCTTTGTACTTGGGTTCATGGTTTGAATTTAAATTTATATAAATATGATAGCGTTTACTTAAAATTTGTGTGAATTTTAATTTATATTATGTGTGTTTTTGAAGTATATTTATTTTTTAAAATGATTCTCACGTTAATTTTAATAGATCAATTGGAAA

mRNA sequence

ACACTCAAAACTCATCTACAAACTCCTCCAAATTTCTATTTACTAATTTTCGTAAACGCATCATGGCAAGTAACTTAATCACGATTCTAAAGTTGGGTTTAACTGTAACACTTCTCTACGCCGTGATAGGTGGAGGGGTGACGACAGAGGCAACCGTAACGTGCAACCAAGTGGTCTCCAATTTGAGTCCATGTATTTCGTACGTGACGGGCGGAGGATCCCCGTCATTTAACTGTTGCAGTGGTGTGAGACAGTTGAACAAGGCAGCTCAGACAACGCCGGATAGACAGGACGTATGTCGGTGCTTGAAATCATTGATCAATGGCGTTACGTATAATGGCCAAAATGTTGCCAATGCTGCTGCTCTTCCGACCAAGTGTGGCGTCAATCTTCCCTACACTATCAACCCCAATGCCGACTGTAGCACCATTAAAATGTGAGGAAAATCAAGCAGCTACACTGCAAGACGATGTCGTATCGATGGAAGAATAAATGGAGAGAGCATTTTGCTATGAACAAATTATGAACTTTGTTTTGAAATATTGTCTACTTGAAAACCCTTTGTACTTGGGTTCATGGTTTGAATTTAAATTTATATAAATATGATAGCGTTTACTTAAAATTTGTGTGAATTTTAATTTATATTATGTGTGTTTTTGAAGTATATTTATTTTTTAAAATGATTCTCACGTTAATTTTAATAGATCAATTGGAAA

Coding sequence (CDS)

ATGGCAAGTAACTTAATCACGATTCTAAAGTTGGGTTTAACTGTAACACTTCTCTACGCCGTGATAGGTGGAGGGGTGACGACAGAGGCAACCGTAACGTGCAACCAAGTGGTCTCCAATTTGAGTCCATGTATTTCGTACGTGACGGGCGGAGGATCCCCGTCATTTAACTGTTGCAGTGGTGTGAGACAGTTGAACAAGGCAGCTCAGACAACGCCGGATAGACAGGACGTATGTCGGTGCTTGAAATCATTGATCAATGGCGTTACGTATAATGGCCAAAATGTTGCCAATGCTGCTGCTCTTCCGACCAAGTGTGGCGTCAATCTTCCCTACACTATCAACCCCAATGCCGACTGTAGCACCATTAAAATGTGA

Protein sequence

MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIKM*
Homology
[Close]
BLAST of MELO3C025219 vs. Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29
Identity = 59/117 (50.43%), Postives = 76/117 (64.96%), Query Frame = 1 

Query: 8   ILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNK 67
           +LKL   V ++  +  GG    A V+C QVV+NL+PCI+YV  GG+ + +CC+GVR L  
Sbjct: 7   LLKLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYS 66

Query: 68  AAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            AQTT DRQ +C CLK  +NG+ Y   N   AA LP KCGVN+PY I+P+ DC +IK
Sbjct: 67  LAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123

[Close]
BLAST of MELO3C025219 vs. Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26
Identity = 55/114 (48.25%), Postives = 75/114 (65.79%), Query Frame = 1 

Query: 10  KLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAA 69
           +L L   +   ++ G  TT A ++C QV S +SPC+SY  GG  PS  CCSGVR LN AA
Sbjct: 5   QLVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAA 64

Query: 70  QTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
            TT DR+  C CLK++   +  +G N  NAA++P+KCGV++PYTI+P+ DCS++
Sbjct: 65  TTTADRRTACNCLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116

[Close]
BLAST of MELO3C025219 vs. Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 1 

Query: 21  VIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCR 80
           ++ G  TT A ++C QV S +SPC+SY  GG  PS  CCSGVR LN AA TT DR+  C 
Sbjct: 17  LLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACN 76

Query: 81  CLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
           CLK++   +  +G N  NAA++P+KCGV++PYTI+P+ DCS++
Sbjct: 77  CLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117

[Close]
BLAST of MELO3C025219 vs. Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 1 

Query: 21  VIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCR 80
           ++ G  TT A ++C QV S +SPC+SY  GG  PS  CCSGVR LN AA TT DR+  C 
Sbjct: 17  LLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACN 76

Query: 81  CLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
           CLK++   +  +G N  NAA++P+KCGV++PYTI+P+ DCS++
Sbjct: 77  CLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117

[Close]
BLAST of MELO3C025219 vs. Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1 

Query: 9   LKLGLTVTLLYA---VIGGGVTTEATVTCNQVVSNLSPCISYVTGGGS-PSFNCCSGVRQ 68
           +KL + + ++ A   V+    T+EA VTC QV S + PC+SY  G GS PS  CCSGVR 
Sbjct: 5   MKLAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRS 64

Query: 69  LNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTI 124
           LN AA+TT DR+  C CLK+   G+   G NV  AA++P+KCGV++PYTI+ + DCS +
Sbjct: 65  LNSAARTTADRRAACNCLKNAARGI--RGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121

[Close]
BLAST of MELO3C025219 vs. TrEMBL
Match: A0A0A0KY77_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_4G333620 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.0e-55
Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = 1 

Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVT LYAVIGGGVTTEA V+CNQV++NL PC+SYVTGGG PS NCCS
Sbjct: 1   MASNLITILKLGLTVTFLYAVIGGGVTTEAVVSCNQVITNLRPCVSYVTGGGYPSSNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GV+QL+ AA+TTPDRQ VCRCLKSL+NGV YNGQNVANAAALPTKCGV LPY+INPN DC
Sbjct: 61  GVKQLSTAARTTPDRQAVCRCLKSLVNGVKYNGQNVANAAALPTKCGVTLPYSINPNVDC 120

Query: 121 STIKM 126
           +TIKM
Sbjct: 121 NTIKM 125

[Close]
BLAST of MELO3C025219 vs. TrEMBL
Match: A0A068PTL1_9ROSI (Non-specific lipid-transfer protein (Fragment) OS=Zanthoxylum ailanthoides PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.5e-29
Identity = 59/108 (54.63%), Postives = 80/108 (74.07%), Query Frame = 1 

Query: 17  LLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQ 76
           LL  +    + T A VTC+ VV++LSPCISYV+GGG+   NCC+GVR LN AAQTT DRQ
Sbjct: 1   LLCLMANAFMGTRAQVTCSVVVNDLSPCISYVSGGGAVPVNCCNGVRTLNNAAQTTADRQ 60

Query: 77  DVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
           +VC+CLK  +NG++Y G N+  AA LP KCG+++PY I+P+ DC  ++
Sbjct: 61  NVCKCLKQAVNGISYTGYNLRLAAGLPDKCGISIPYKISPSTDCDKVQ 108

[Close]
BLAST of MELO3C025219 vs. TrEMBL
Match: A9PH75_POPTR (Non-specific lipid-transfer protein OS=Populus trichocarpa GN=POPTR_0016s14300g PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.6e-28
Identity = 57/98 (58.16%), Postives = 76/98 (77.55%), Query Frame = 1 

Query: 27  TTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCRCLKSLI 86
           TT+A ++CNQV++ L+PCISYV G G+ + NCC+G+R LN AA+TTPDRQ VC CLK+  
Sbjct: 23  TTKAAISCNQVINTLTPCISYVVGNGALTDNCCNGIRGLNSAARTTPDRQSVCTCLKNTA 82

Query: 87  NGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
           +  +YN +NVA AA LP KCGV LPY I+P+ DC ++K
Sbjct: 83  SQFSYNSRNVALAAGLPGKCGVKLPYKIDPSTDCKSVK 120

[Close]
BLAST of MELO3C025219 vs. TrEMBL
Match: A0A0D2NXI5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G235100 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.6e-28
Identity = 59/118 (50.00%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 8   ILKL-GLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLN 67
           +LKL  + + +  AV+G     +A +TC+ VVS+L PC+SYV  GG+P+  CCSGV+ L 
Sbjct: 6   VLKLVSMILIVCMAVMGAPKAAKAAITCSDVVSHLIPCLSYVQNGGTPAAACCSGVKTLY 65

Query: 68  KAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
             AQT+PDRQDVC+C+KS +NG+ Y G N+  AA LP KCG++LPY I+P+ DC+ ++
Sbjct: 66  GQAQTSPDRQDVCKCIKSAVNGMPYTGYNLNLAAGLPAKCGLHLPYNISPSTDCNKVQ 123

[Close]
BLAST of MELO3C025219 vs. TrEMBL
Match: A0A068PU54_9ROSI (Non-specific lipid-transfer protein (Fragment) OS=Zanthoxylum ailanthoides PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.7e-28
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 17  LLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQ 76
           LL  +    + T A VTC+ VV++LSPCISYV+ GG+   NCC+GVR LN AAQTT DRQ
Sbjct: 1   LLCLMANAFMGTRAQVTCSVVVNDLSPCISYVSAGGAVPVNCCNGVRTLNNAAQTTADRQ 60

Query: 77  DVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
           +VC+CLK  +NG++Y G N+  AA LP KCG+++PY I+P+ DC  ++
Sbjct: 61  NVCKCLKQAVNGISYTGYNLRLAAGLPEKCGISIPYKISPSTDCDKVQ 108

[Close]
BLAST of MELO3C025219 vs. TAIR10
Match: AT5G01870.1 (AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 1 

Query: 17  LLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQ 76
           LL ++   G  +EA ++CN V +NL PC+ YV  GG+  ++CC+G+R L+K A +  D+Q
Sbjct: 11  LLASIFAWG--SEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQ 70

Query: 77  DVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            VCRC+KS++  V+Y+   +  AAALP KCGV LPY I+P+ +C++IK
Sbjct: 71  GVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116

[Close]
BLAST of MELO3C025219 vs. TAIR10
Match: AT3G08770.2 (AT3G08770.2 lipid transfer protein 6)

HSP 1 Score: 110.5 bits (275), Expect = 7.4e-25
Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 1 

Query: 13  LTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTT 72
           L V L+ A+  G    EA V+CN V+++L PC+SYVT GG     CC+G+  L   AQT+
Sbjct: 6   LAVCLVLALHCG----EAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTS 65

Query: 73  PDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCST 123
            DRQ VCRC+KS I G+T + + + NA  LP+KCGV+LPY  +P+ DC +
Sbjct: 66  VDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDS 111

[Close]
BLAST of MELO3C025219 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 103.6 bits (257), Expect = 9.1e-23
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 1 

Query: 27  TTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQDVCRCLKSLI 86
           + +A +TC  V S+LSPC+ Y++ GG     CC+GV++LN  AQTTPDRQ  CRCL+S  
Sbjct: 20  SVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAA 79

Query: 87  NGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            GV     N + A+ LP KCGV++PY I+ + +C+TIK
Sbjct: 80  KGV-----NPSLASGLPGKCGVSIPYPISTSTNCATIK 112

[Close]
BLAST of MELO3C025219 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 100.5 bits (249), Expect = 7.7e-22
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 1 

Query: 8   ILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNK 67
           ++KL   + L   ++ G +T+ A ++C  V SNL+ CI YV  GG     CCSGV+ LN 
Sbjct: 4   VMKLACLL-LACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNS 63

Query: 68  AAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            A+TTPDRQ  C C++     +  +G N   AA +P  CGVN+PY I+ + +C T++
Sbjct: 64  IAKTTPDRQQACNCIQGAARALG-SGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118

[Close]
BLAST of MELO3C025219 vs. TAIR10
Match: AT2G38530.1 (AT2G38530.1 lipid transfer protein 2)

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 1 

Query: 8   ILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNK 67
           ++KL   V L   ++ G +T  A ++C  V  NL+ CI+Y+T G   +  CC+GV  L  
Sbjct: 4   VMKLACMV-LACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKN 63

Query: 68  AAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            A TTPDRQ  CRCL+S    V   G N A AA LP+ C VN+PY I+ + +C+T++
Sbjct: 64  MASTTPDRQQACRCLQSAAKAVG-PGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118

[Close]
BLAST of MELO3C025219 vs. NCBI nr
Match: gi|659126582|ref|XP_008463259.1| (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-65
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1 

Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120

Query: 121 STIKM 126
           STIKM
Sbjct: 121 STIKM 125

[Close]
BLAST of MELO3C025219 vs. NCBI nr
Match: gi|449467971|ref|XP_004151695.1| (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-55
Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = 1 

Query: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60
           MASNLITILKLGLTVT LYAVIGGGVTTEA V+CNQV++NL PC+SYVTGGG PS NCCS
Sbjct: 1   MASNLITILKLGLTVTFLYAVIGGGVTTEAVVSCNQVITNLRPCVSYVTGGGYPSSNCCS 60

Query: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120
           GV+QL+ AA+TTPDRQ VCRCLKSL+NGV YNGQNVANAAALPTKCGV LPY+INPN DC
Sbjct: 61  GVKQLSTAARTTPDRQAVCRCLKSLVNGVKYNGQNVANAAALPTKCGVTLPYSINPNVDC 120

Query: 121 STIKM 126
           +TIKM
Sbjct: 121 NTIKM 125

[Close]
BLAST of MELO3C025219 vs. NCBI nr
Match: gi|694440151|ref|XP_009346911.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Pyrus x bretschneideri])

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-30
Identity = 63/117 (53.85%), Postives = 80/117 (68.38%), Query Frame = 1 

Query: 8   ILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNK 67
           +LKLG  V +++ ++ G    EA VTC QVV++L PCISYV  GG+    CC+GVR L  
Sbjct: 7   LLKLGCLVVVMFCMVAGAPKAEAAVTCGQVVNSLVPCISYVGNGGALDPACCNGVRTLYN 66

Query: 68  AAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            AQTTPDRQ+VC CLK  ING+ Y   N   AA LP KCGVN+PY I+P+ DC ++K
Sbjct: 67  LAQTTPDRQNVCNCLKQAINGIPYTNTNAGLAAGLPAKCGVNIPYKISPSTDCKSVK 123

[Close]
BLAST of MELO3C025219 vs. NCBI nr
Match: gi|657957505|ref|XP_008370253.1| (PREDICTED: non-specific lipid-transfer protein 3-like [Malus domestica])

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-29
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 1 

Query: 8   ILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNK 67
           +LKL   V +++ ++ G    EA VTC QVV++L PC+SYVT GG+ +  CC+GV+ L  
Sbjct: 7   LLKLACLVVVMFCMVAGAPKAEAAVTCGQVVNSLVPCLSYVTNGGALNPACCNGVKTLYN 66

Query: 68  AAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
            AQTTPDRQ+VC CLK  ING+ Y   N   AA LP +CGVN+PY I+P+ DC ++K
Sbjct: 67  LAQTTPDRQNVCNCLKQAINGIPYTNTNAGLAAGLPARCGVNIPYKISPSTDCKSVK 123

[Close]
BLAST of MELO3C025219 vs. NCBI nr
Match: gi|661902488|dbj|BAP11226.1| (hypothetical protein, partial [Zanthoxylum ailanthoides])

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-28
Identity = 59/108 (54.63%), Postives = 80/108 (74.07%), Query Frame = 1 

Query: 17  LLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKAAQTTPDRQ 76
           LL  +    + T A VTC+ VV++LSPCISYV+GGG+   NCC+GVR LN AAQTT DRQ
Sbjct: 1   LLCLMANAFMGTRAQVTCSVVVNDLSPCISYVSGGGAVPVNCCNGVRTLNNAAQTTADRQ 60

Query: 77  DVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADCSTIK 125
           +VC+CLK  +NG++Y G N+  AA LP KCG+++PY I+P+ DC  ++
Sbjct: 61  NVCKCLKQAVNGISYTGYNLRLAAGLPDKCGISIPYKISPSTDCDKVQ 108

The following BLAST results are available for this feature:
BLAST of MELO3C025219 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP3_PRUDU1.6e-2950.43Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1[more]
NLT2B_ORYSJ1.7e-2648.25Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B... [more]
NLT2A_ORYSJ2.2e-2651.46Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A... [more]
NLTP2_ORYSI2.2e-2651.46Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE... [more]
NLTP2_SORBI1.1e-2548.74Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1[more]
BLAST of MELO3C025219 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY77_CUCSA2.0e-5584.00Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_4G333620 PE=3 SV=1[more]
A0A068PTL1_9ROSI9.5e-2954.63Non-specific lipid-transfer protein (Fragment) OS=Zanthoxylum ailanthoides PE=3 ... [more]
A9PH75_POPTR3.6e-2858.16Non-specific lipid-transfer protein OS=Populus trichocarpa GN=POPTR_0016s14300g ... [more]
A0A0D2NXI5_GOSRA3.6e-2850.00Uncharacterized protein OS=Gossypium raimondii GN=B456_006G235100 PE=3 SV=1[more]
A0A068PU54_9ROSI4.7e-2853.70Non-specific lipid-transfer protein (Fragment) OS=Zanthoxylum ailanthoides PE=3 ... [more]
BLAST of MELO3C025219 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G01870.12.0e-2546.30 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G08770.27.4e-2548.18 lipid transfer protein 6[more]
AT5G59310.19.1e-2348.98 lipid transfer protein 4[more]
AT2G38540.17.7e-2240.17 lipid transfer protein 1[more]
AT2G38530.11.3e-2141.88 lipid transfer protein 2[more]
BLAST of MELO3C025219 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126582|ref|XP_008463259.1|2.4e-65100.00PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo][more]
gi|449467971|ref|XP_004151695.1|2.9e-5584.00PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis sativus][more]
gi|694440151|ref|XP_009346911.1|2.5e-3053.85PREDICTED: non-specific lipid-transfer protein 3-like [Pyrus x bretschneideri][more]
gi|657957505|ref|XP_008370253.1|1.2e-2951.28PREDICTED: non-specific lipid-transfer protein 3-like [Malus domestica][more]
gi|661902488|dbj|BAP11226.1|1.4e-2854.63hypothetical protein, partial [Zanthoxylum ailanthoides][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009539 photosystem II reaction center
cellular_component GO:0016020 membrane
molecular_function GO:0008289 lipid binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47665melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025219T1MELO3C025219T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47665MU47665transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 93..110
score: 1.4E-26coord: 74..89
score: 1.4E-26coord: 111..122
score: 1.4E-26coord: 53..67
score: 1.4E-26coord: 33..49
score: 1.4
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF00234Tryp_alpha_amylcoord: 34..112
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 34..120
score: 1.1
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 32..123
score: 1.96
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 32..124
score: 1.1
NoneNo IPR availablePANTHERPTHR33076FAMILY NOT NAMEDcoord: 1..125
score: 1.4
NoneNo IPR availablePANTHERPTHR33076:SF11BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 1..125
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C025219Csa4G333620Cucumber (Chinese Long) v2cumeB267
MELO3C025219Cla012032Watermelon (97103) v1mewmB575
MELO3C025219Cla018045Watermelon (97103) v1mewmB556
MELO3C025219ClCG10G022680Watermelon (Charleston Gray)mewcgB510
MELO3C025219ClCG04G006370Watermelon (Charleston Gray)mewcgB525
MELO3C025219Cla97C04G072960Watermelon (97103) v2mewmbB533
MELO3C025219Cla97C10G206090Watermelon (97103) v2mewmbB521
MELO3C025219Bhi03G001765Wax gourdmewgoB652
MELO3C025219Bhi11G001455Wax gourdmewgoB616
MELO3C025219CSPI04G16540Wild cucumber (PI 183967)cpimeB330
MELO3C025219CSPI03G30680Wild cucumber (PI 183967)cpimeB254
MELO3C025219Cucsa.130510Cucumber (Gy14) v1cgymeB210
MELO3C025219Cucsa.176970Cucumber (Gy14) v1cgymeB319
MELO3C025219CmaCh07G012230Cucurbita maxima (Rimu)cmameB801
MELO3C025219Lsi03G022750Bottle gourd (USVL1VR-Ls)lsimeB277
MELO3C025219Lsi01G016160Bottle gourd (USVL1VR-Ls)lsimeB157
MELO3C025219Cp4.1LG19g01490Cucurbita pepo (Zucchini)cpemeB459
MELO3C025219CsGy4G015860Cucumber (Gy14) v2cgybmeB284
MELO3C025219CsGy3G028500Cucumber (Gy14) v2cgybmeB222
MELO3C025219Carg12652Silver-seed gourdcarmeB0283
MELO3C025219CsaV3_3G033150Cucumber (Chinese Long) v3cucmeB260
MELO3C025219CsaV3_4G027160Cucumber (Chinese Long) v3cucmeB335
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C025219MELO3C009108Melon (DHL92) v3.5.1memeB146
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025219Melon (DHL92) v3.5.1memeB133
MELO3C025219Cucurbita maxima (Rimu)cmameB610
MELO3C025219Cucurbita maxima (Rimu)cmameB709
MELO3C025219Cucurbita maxima (Rimu)cmameB775
MELO3C025219Cucurbita moschata (Rifu)cmomeB599
MELO3C025219Cucurbita moschata (Rifu)cmomeB701
MELO3C025219Cucurbita moschata (Rifu)cmomeB762
MELO3C025219Cucurbita moschata (Rifu)cmomeB785
MELO3C025219Wild cucumber (PI 183967)cpimeB517
MELO3C025219Watermelon (Charleston Gray)mewcgB511
MELO3C025219Cucurbita pepo (Zucchini)cpemeB070
MELO3C025219Cucurbita pepo (Zucchini)cpemeB821
MELO3C025219Bottle gourd (USVL1VR-Ls)lsimeB276
MELO3C025219Cucumber (Gy14) v2cgybmeB450
MELO3C025219Silver-seed gourdcarmeB0025
MELO3C025219Silver-seed gourdcarmeB0168
MELO3C025219Silver-seed gourdcarmeB0627
MELO3C025219Cucumber (Chinese Long) v3cucmeB525
MELO3C025219Watermelon (97103) v2mewmbB522
MELO3C025219Wax gourdmewgoB626