Cucsa.176970 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.176970
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionNon-specific lipid-transfer protein
Locationscaffold01225 : 983069 .. 983964 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAAGGGGTTTAATCCACAGAGCGAGTGAGAGAGAGGAAGATCAGAAAAGTAAACAATTAGATTTGTGGAGGGAAGAATCTGATTAAAGCGTAAGAAAGAGAGATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAGGATCAGCCCCAGCACCGACTGCGCCAAGTATCTACCTATCTATCTATTTCTAATTCTTTTCTATTATATCTTCTAACTAATTCCCTTCTTGATTCTGTTTCTAATTTTAATTTGAATTTGTTTGGTTGCAGGGTGAACTAAATGAATGGTAATCGTGTAATCATCCTCCACCGCACCCATCTACTGCCTCATTATTATGATTATAGTTAATTATGATTATTATATTAGTGGTCTCCATGGGTAGCTTAATTAGCTTAGATTTGAATCTACCTAAATACCAATATAATAAACAGCATGGGATACTTTGTTGTTTGATATCCTATGCTTCTTCTTTTTTCTTCTACTACGTCTACTGTGTTGTGTGTATGAGTATGAGATTCCAATGATTTATATCATTGCGAATTCCAAATTATCAATTATCAATTTAaTAAAAAAAaaTTCCCTCATTTTCTACCTACTAATA

mRNA sequence

CAGAAGGGGTTTAATCCACAGAGCGAGTGAGAGAGAGGAAGATCAGAAAAGTAAACAATTAGATTTGTGGAGGGAAGAATCTGATTAAAGCGTAAGAAAGAGAGATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAGGATCAGCCCCAGCACCGACTGCGCCAAGTATCTACCTATCTATCTATTTCTAATTCTTTTCTATTATATCTTCTAACTAATTCCCTTCTTGATTCTGTTTCTAATTTTAATTTGAATTTGTTTGGTTGCAGGGTGAACTAAATGAATGGTAATCGTGTAATCATCCTCCACCGCACCCATCTACTGCCTCATTATTATGATTATAGTTAATTATGATTATTATATTAGTGGTCTCCATGGGTAGCTTAATTAGCTTAGATTTGAATCTACCTAAATACCAATATAATAAACAGCATGGGATACTTTGTTGTTTGATATCCTATGCTTCTTCTTTTTTCTTCTACTACGTCTACTGTGTTGTGTGTATGAGTATGAGATTCCAATGATTTATATCATTGCGAATTCCAAATTATCAATTATCAATTTAATAAAAAAAAATTCCCTCATTTTCTACCTACTAATA

Coding sequence (CDS)

ATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAGGATCAGCCCCAGCACCGACTGCGCCAAGTATCTACCTATCTATCTATTTCTAATTCTTTTCTATTATATCTTCTAA

Protein sequence

MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCAKYLPIYLFLILFYYIF*
Homology
[Close]
BLAST of Cucsa.176970 vs. Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.5e-28
Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 1 

Query: 16  IVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRR 75
           +V +CM V   A  +TCG+V SS++ CIGY+RS  G VP  CCNGIR++N  A TT DR+
Sbjct: 12  VVALCMAVS-VAHAITCGQVTSSLAPCIGYVRSG-GAVPPACCNGIRTINGLARTTADRQ 71

Query: 76  IACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCA 119
            ACNCLK  AGSI G+N   AA LP KCGV+VPY+IS ST+CA
Sbjct: 72  TACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCA 112

[Close]
BLAST of Cucsa.176970 vs. Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 7.2e-28
Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 8   LMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQ 67
           L++V +V   ++        A ++CG+V S+VS C+ Y R   G     CC+G+RSLNS 
Sbjct: 6   LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGP-SAACCSGVRSLNSA 65

Query: 68  ASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCA 119
           ASTT DRR ACNCLK  AGSI G+N G AAS+PSKCGVS+PY ISPS DC+
Sbjct: 66  ASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 115

[Close]
BLAST of Cucsa.176970 vs. Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.2e-28
Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 1 

Query: 8   LMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQ 67
           L++V +V   ++        A ++CG+V S+VS C+ Y R   G     CC+G+RSLNS 
Sbjct: 6   LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGP-SAACCSGVRSLNSA 65

Query: 68  ASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCA 119
           ASTT DRR ACNCLK  AGSI G+N G AAS+PSKCGVS+PY ISPS DC+
Sbjct: 66  ASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 115

[Close]
BLAST of Cucsa.176970 vs. Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 1 

Query: 30  MTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRIACNCLKAAAGSIE 89
           +TCG+V+SS++ CI YLR A G VP  CCNG+RSLN+ A TT DR+ ACNCLK+A  SI+
Sbjct: 1   ITCGQVSSSLAPCINYLR-AGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIK 60

Query: 90  GINYGAAASLPSKCGVSVPYRISPSTDC 118
           G+N   AA LP KCGVSVPY+ISPSTDC
Sbjct: 61  GLNLNLAAGLPGKCGVSVPYKISPSTDC 87

[Close]
BLAST of Cucsa.176970 vs. Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-27
Identity = 57/104 (54.81%), Postives = 77/104 (74.04%), Query Frame = 1 

Query: 16  IVMMCMVVQGEAA-GMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDR 75
           +V +CMVV    A  +TCG+V+S+++ CI Y+R   G VP  CCNGIR++N+ A TT DR
Sbjct: 12  VVALCMVVSVPIAQALTCGQVSSNLAPCIAYVRGG-GAVPPACCNGIRNINNLAKTTADR 71

Query: 76  RIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCA 119
           + ACNCLK  + S+ G+N   AA+LP KCGV+VPY+ISPST+CA
Sbjct: 72  QTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCA 114

[Close]
BLAST of Cucsa.176970 vs. TrEMBL
Match: A0A0A0LF44_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G728130 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-60
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 1 

Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG
Sbjct: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCAK 120
           IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPY+ISPSTDCAK
Sbjct: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAK 119

[Close]
BLAST of Cucsa.176970 vs. TrEMBL
Match: A0A059ST23_PUNGR (Non-specific lipid-transfer protein OS=Punica granatum PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-29
Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 13  IVGIVMMCMVVQGEAA--GMTCGKVASSVSGCIGYLR-SAQGQVPQVCCNGIRSLNSQAS 72
           + G V++CM V    A  G+TCG+V+SS++GCI Y R +  G VPQ CCNGIRSLNS A 
Sbjct: 9   LAGFVLVCMAVASTVAEAGITCGQVSSSLAGCIQYARGNGAGPVPQACCNGIRSLNSAAK 68

Query: 73  TTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDC 118
           TT DR+ AC CLK+ A SI GINYG  A  P KCGVS+PY+I+PST+C
Sbjct: 69  TTPDRQAACRCLKSLASSISGINYGLVAGAPGKCGVSIPYKIAPSTNC 116

[Close]
BLAST of Cucsa.176970 vs. TrEMBL
Match: C5H617_9ROSI (Non-specific lipid-transfer protein OS=Juglans regia PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-29
Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 1 

Query: 5   LKGLMIVGIVGIVMMCMVVQGEAAG--MTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIR 64
           + G +++ + G+V++CMVV    A   +TCG+VASSV  CIGYLR     VP  CCNG++
Sbjct: 1   MTGSLVLKLSGMVLLCMVVAAPVAEAVITCGQVASSVGSCIGYLRGTVPTVPPSCCNGVK 60

Query: 65  SLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDC 118
           SLN  A+TT DR+ AC CLK  +GSI G+N G AA LP KCGVSVPY+IS ST+C
Sbjct: 61  SLNKAAATTADRQAACECLKKTSGSIPGLNPGLAAGLPGKCGVSVPYKISTSTNC 115

[Close]
BLAST of Cucsa.176970 vs. TrEMBL
Match: I1T4C3_GOSAI (Non-specific lipid-transfer protein OS=Gossypium aridum PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 63/116 (54.31%), Postives = 86/116 (74.14%), Query Frame = 1 

Query: 9   MIVGIVGIVMMCMVVQGEAA--GMTCGKVASSVSGCIGYLR-SAQGQVPQVCCNGIRSLN 68
           M + +  ++++CMVV    A   +TCG+V +S++ CIGYLR +  G VPQ CC GI+SLN
Sbjct: 5   MSLKLACVLVLCMVVGAPLAQGAVTCGQVTTSLAPCIGYLRGNGAGTVPQGCCGGIKSLN 64

Query: 69  SQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCAKYL 122
           S A TT DR+ AC C+K+AA  I GINYG A+ LPSKCGV++PY+ISPSTDC +++
Sbjct: 65  SAAQTTPDRQAACKCIKSAAAGISGINYGIASGLPSKCGVNIPYKISPSTDCNRFV 120

[Close]
BLAST of Cucsa.176970 vs. TrEMBL
Match: I1T4C5_9ROSI (Non-specific lipid-transfer protein OS=Gossypium lobatum PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 63/116 (54.31%), Postives = 86/116 (74.14%), Query Frame = 1 

Query: 9   MIVGIVGIVMMCMVVQGEAA--GMTCGKVASSVSGCIGYLR-SAQGQVPQVCCNGIRSLN 68
           M + +  ++++CMVV    A   +TCG+V +S++ CIGYLR +  G VPQ CC GI+SLN
Sbjct: 5   MSLKLACVLVLCMVVGAPLAQGAVTCGQVTTSLAPCIGYLRGNGAGTVPQGCCGGIKSLN 64

Query: 69  SQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCAKYL 122
           S A TT DR+ AC C+K+AA  I GINYG A+ LPSKCGV++PY+ISPSTDC +++
Sbjct: 65  SAAQTTPDRQAACKCIKSAAAGISGINYGIASGLPSKCGVNIPYKISPSTDCNRFV 120

[Close]
BLAST of Cucsa.176970 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 105.1 bits (261), Expect = 3.3e-23
Identity = 48/112 (42.86%), Postives = 77/112 (68.75%), Query Frame = 1 

Query: 10  IVGIVGIVMMCMVVQGEA---AGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNS 69
           ++ +  +++ CM+V G     A ++CG V S+++ CIGY+    G +P  CC+G+++LNS
Sbjct: 4   VMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQG-GVIPPACCSGVKNLNS 63

Query: 70  QASTTVDRRIACNCLKAAAGSI-EGINYGAAASLPSKCGVSVPYRISPSTDC 118
            A TT DR+ ACNC++ AA ++  G+N G AA +P  CGV++PY+IS ST+C
Sbjct: 64  IAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNC 114

[Close]
BLAST of Cucsa.176970 vs. TAIR10
Match: AT5G59310.1 (AT5G59310.1 lipid transfer protein 4)

HSP 1 Score: 104.4 bits (259), Expect = 5.7e-23
Identity = 53/102 (51.96%), Postives = 68/102 (66.67%), Query Frame = 1 

Query: 17  VMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRI 76
           V+   +V    A +TCG VASS+S C+GYL S  G VP  CC G++ LN  A TT DR+ 
Sbjct: 12  VLTVFIVASVDAAITCGTVASSLSPCLGYL-SKGGVVPPPCCAGVKKLNGMAQTTPDRQQ 71

Query: 77  ACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCA 119
           AC CL++AA   +G+N   A+ LP KCGVS+PY IS ST+CA
Sbjct: 72  ACRCLQSAA---KGVNPSLASGLPGKCGVSIPYPISTSTNCA 109

[Close]
BLAST of Cucsa.176970 vs. TAIR10
Match: AT5G59320.1 (AT5G59320.1 lipid transfer protein 3)

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-22
Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 1 

Query: 16  IVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRR 75
           ++ +C+V   +AA ++CG VA S++ C  YL S  G VP  CC G+++LNS A TT DR+
Sbjct: 12  VLTVCIVASVDAA-ISCGTVAGSLAPCATYL-SKGGLVPPSCCAGVKTLNSMAKTTPDRQ 71

Query: 76  IACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDC 118
            AC C+++ A SI G+N   A+ LP KCGVS+PY IS ST+C
Sbjct: 72  QACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNC 111

[Close]
BLAST of Cucsa.176970 vs. TAIR10
Match: AT2G38530.1 (AT2G38530.1 lipid transfer protein 2)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-20
Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = 1 

Query: 10  IVGIVGIVMMCMVVQGEAAG---MTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNS 69
           ++ +  +V+ CM+V G       M+CG V  +++GCI YL +    + Q CCNG+ +L +
Sbjct: 4   VMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYL-TRGAPLTQGCCNGVTNLKN 63

Query: 70  QASTTVDRRIACNCLKAAAGSI-EGINYGAAASLPSKCGVSVPYRISPSTDC 118
            ASTT DR+ AC CL++AA ++  G+N   AA LPS C V++PY+IS ST+C
Sbjct: 64  MASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNC 114

[Close]
BLAST of Cucsa.176970 vs. TAIR10
Match: AT3G08770.2 (AT3G08770.2 lipid transfer protein 6)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 1 

Query: 16  IVMMCMVVQ---GEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTV 75
           ++ +C+V+    GEAA ++C  V + +  C+ Y+    G VP +CCNG+ +L SQA T+V
Sbjct: 5   LLAVCLVLALHCGEAA-VSCNTVIADLYPCLSYVTQG-GPVPTLCCNGLTTLKSQAQTSV 64

Query: 76  DRRIACNCLKAAAG--SIEGINYGAAASLPSKCGVSVPYRISPSTDC 118
           DR+  C C+K+A G  ++       A  LPSKCGV +PY+ SPSTDC
Sbjct: 65  DRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDC 109

[Close]
BLAST of Cucsa.176970 vs. NCBI nr
Match: gi|778683048|ref|XP_011651835.1| (PREDICTED: non-specific lipid-transfer protein 1 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 4.2e-60
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 1 

Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG
Sbjct: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCAK 120
           IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPY+ISPSTDCAK
Sbjct: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAK 119

[Close]
BLAST of Cucsa.176970 vs. NCBI nr
Match: gi|659083380|ref|XP_008442324.1| (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 6.5e-37
Identity = 83/119 (69.75%), Postives = 94/119 (78.99%), Query Frame = 1 

Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLMIVGIV   MMCMVV GEAA +TCG VA+++  CI YLRS    VP  CC+G
Sbjct: 1   MEMKLKGLMIVGIV---MMCMVVLGEAA-VTCGSVATAMGPCIPYLRSPSASVPAGCCSG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCAK 120
           IRSLN QA+TT DRR ACNCLK+AA SI GINY AAA LP KCGVS+ Y ISP+TDC++
Sbjct: 61  IRSLNGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSR 115

[Close]
BLAST of Cucsa.176970 vs. NCBI nr
Match: gi|559797763|gb|AHB19225.1| (non specific lipid transfer protein 1C [Punica granatum])

HSP 1 Score: 135.6 bits (340), Expect = 6.5e-29
Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 13  IVGIVMMCMVVQGEAA--GMTCGKVASSVSGCIGYLR-SAQGQVPQVCCNGIRSLNSQAS 72
           + G V++CM V    A  G+TCG+V+SS++GCI Y R +  G VPQ CCNGIRSLNS A 
Sbjct: 9   LAGFVLVCMAVASTVAEAGITCGQVSSSLAGCIQYARGNGAGPVPQACCNGIRSLNSAAK 68

Query: 73  TTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDC 118
           TT DR+ AC CLK+ A SI GINYG  A  P KCGVS+PY+I+PST+C
Sbjct: 69  TTPDRQAACRCLKSLASSISGINYGLVAGAPGKCGVSIPYKIAPSTNC 116

[Close]
BLAST of Cucsa.176970 vs. NCBI nr
Match: gi|209484145|gb|ACI47547.1| (nonspecific lipid transfer protein [Juglans regia])

HSP 1 Score: 135.6 bits (340), Expect = 6.5e-29
Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 1 

Query: 5   LKGLMIVGIVGIVMMCMVVQGEAAG--MTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIR 64
           + G +++ + G+V++CMVV    A   +TCG+VASSV  CIGYLR     VP  CCNG++
Sbjct: 1   MTGSLVLKLSGMVLLCMVVAAPVAEAVITCGQVASSVGSCIGYLRGTVPTVPPSCCNGVK 60

Query: 65  SLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDC 118
           SLN  A+TT DR+ AC CLK  +GSI G+N G AA LP KCGVSVPY+IS ST+C
Sbjct: 61  SLNKAAATTADRQAACECLKKTSGSIPGLNPGLAAGLPGKCGVSVPYKISTSTNC 115

[Close]
BLAST of Cucsa.176970 vs. NCBI nr
Match: gi|1009155718|ref|XP_015895861.1| (PREDICTED: non-specific lipid-transfer protein 1-like [Ziziphus jujuba])

HSP 1 Score: 135.6 bits (340), Expect = 6.5e-29
Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 1 

Query: 9   MIVGIVGIVMMCMVVQGEAA-GMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQ 68
           M V ++ IV++CMVV    A  +TCG+V SS++ CI Y++S  G +P  CC+GI+SLNS 
Sbjct: 5   MFVKLISIVVLCMVVGAPLAHAITCGQVTSSLAPCINYVKSG-GVIPPGCCSGIKSLNSA 64

Query: 69  ASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYRISPSTDCAK-----YLP 128
           A TT DR+  CNCLK+AAGSI GIN+   A LP KCGV++PY+ISPST+CA+     + P
Sbjct: 65  AKTTADRQATCNCLKSAAGSIPGINFNLVAGLPGKCGVNIPYKISPSTNCARSILHYFPP 124

Query: 129 IYLFLILFYY 133
           + L L +F +
Sbjct: 125 VNLDLNIFEF 133

The following BLAST results are available for this feature:
BLAST of Cucsa.176970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP_MALDO5.5e-2859.22Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1[more]
NLT2A_ORYSJ7.2e-2854.05Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A... [more]
NLTP2_ORYSI7.2e-2854.05Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE... [more]
LTP1_MORNI1.6e-2765.91Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1[more]
NLTP_PRUAV2.7e-2754.81Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1[more]
BLAST of Cucsa.176970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF44_CUCSA2.9e-6099.16Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_3G728130 PE=3 SV=1[more]
A0A059ST23_PUNGR4.6e-2959.26Non-specific lipid-transfer protein OS=Punica granatum PE=2 SV=1[more]
C5H617_9ROSI4.6e-2955.65Non-specific lipid-transfer protein OS=Juglans regia PE=2 SV=1[more]
I1T4C3_GOSAI1.3e-2854.31Non-specific lipid-transfer protein OS=Gossypium aridum PE=3 SV=1[more]
I1T4C5_9ROSI1.3e-2854.31Non-specific lipid-transfer protein OS=Gossypium lobatum PE=3 SV=1[more]
BLAST of Cucsa.176970 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G38540.13.3e-2342.86 lipid transfer protein 1[more]
AT5G59310.15.7e-2351.96 lipid transfer protein 4[more]
AT5G59320.13.7e-2249.02 lipid transfer protein 3[more]
AT2G38530.12.0e-2042.86 lipid transfer protein 2[more]
AT3G08770.21.9e-1842.99 lipid transfer protein 6[more]
BLAST of Cucsa.176970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778683048|ref|XP_011651835.1|4.2e-6099.16PREDICTED: non-specific lipid-transfer protein 1 [Cucumis sativus][more]
gi|659083380|ref|XP_008442324.1|6.5e-3769.75PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo][more]
gi|559797763|gb|AHB19225.1|6.5e-2959.26non specific lipid transfer protein 1C [Punica granatum][more]
gi|209484145|gb|ACI47547.1|6.5e-2955.65nonspecific lipid transfer protein [Juglans regia][more]
gi|1009155718|ref|XP_015895861.1|6.5e-2951.54PREDICTED: non-specific lipid-transfer protein 1-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO:0008289lipid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0008289 lipid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.176970.1Cucsa.176970.1mRNA
Cucsa.176970.2Cucsa.176970.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 52..66
score: 6.6E-30coord: 108..119
score: 6.6E-30coord: 90..107
score: 6.6E-30coord: 73..88
score: 6.6E-30coord: 31..47
score: 6.6
IPR000528Plant lipid transfer protein/Par allergenPROSITEPS00597PLANT_LTPcoord: 99..120
scor
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF00234Tryp_alpha_amylcoord: 32..117
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 32..117
score: 3.2
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 30..120
score: 1.27
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 30..121
score: 1.1
NoneNo IPR availablePANTHERPTHR33076FAMILY NOT NAMEDcoord: 1..120
score: 1.1
NoneNo IPR availablePANTHERPTHR33076:SF14SUBFAMILY NOT NAMEDcoord: 1..120
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.176970Cla018045Watermelon (97103) v1cgywmB333
Cucsa.176970Cla012032Watermelon (97103) v1cgywmB338
Cucsa.176970Csa4G333620Cucumber (Chinese Long) v2cgycuB269
Cucsa.176970Csa3G728130Cucumber (Chinese Long) v2cgycuB268
Cucsa.176970MELO3C025219Melon (DHL92) v3.5.1cgymeB319
Cucsa.176970MELO3C009108Melon (DHL92) v3.5.1cgymeB315
Cucsa.176970ClCG04G006370Watermelon (Charleston Gray)cgywcgB316
Cucsa.176970ClCG10G022680Watermelon (Charleston Gray)cgywcgB311
Cucsa.176970CSPI03G30680Wild cucumber (PI 183967)cgycpiB278
Cucsa.176970CSPI04G16540Wild cucumber (PI 183967)cgycpiB279
Cucsa.176970CmaCh07G012230Cucurbita maxima (Rimu)cgycmaB0508
Cucsa.176970CmaCh14G000160Cucurbita maxima (Rimu)cgycmaB0496
Cucsa.176970CmoCh14G000120Cucurbita moschata (Rifu)cgycmoB0498
Cucsa.176970Lsi01G016160Bottle gourd (USVL1VR-Ls)cgylsiB293
Cucsa.176970Lsi03G022750Bottle gourd (USVL1VR-Ls)cgylsiB296
Cucsa.176970Cp4.1LG03g03210Cucurbita pepo (Zucchini)cgycpeB0488
Cucsa.176970MELO3C009108.2Melon (DHL92) v3.6.1cgymedB310
Cucsa.176970MELO3C025219.2Melon (DHL92) v3.6.1cgymedB314
Cucsa.176970CsaV3_4G027160Cucumber (Chinese Long) v3cgycucB282
Cucsa.176970CsaV3_3G033150Cucumber (Chinese Long) v3cgycucB281
Cucsa.176970Cla97C10G206090Watermelon (97103) v2cgywmbB316
Cucsa.176970Cla97C04G072960Watermelon (97103) v2cgywmbB321
Cucsa.176970Bhi03G001765Wax gourdcgywgoB363
Cucsa.176970Bhi11G001455Wax gourdcgywgoB359
Cucsa.176970Carg12652Silver-seed gourdcarcgyB0333
Cucsa.176970Carg12439Silver-seed gourdcarcgyB1116
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.176970Cucsa.130510Cucumber (Gy14) v1cgycgyB078
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.176970Cucurbita pepo (Zucchini)cgycpeB0482
Cucsa.176970Cucurbita pepo (Zucchini)cgycpeB0490
Cucsa.176970Silver-seed gourdcarcgyB0194
Cucsa.176970Cucurbita maxima (Rimu)cgycmaB0503
Cucsa.176970Cucurbita maxima (Rimu)cgycmaB0506
Cucsa.176970Cucurbita moschata (Rifu)cgycmoB0502
Cucsa.176970Cucurbita moschata (Rifu)cgycmoB0504
Cucsa.176970Cucurbita moschata (Rifu)cgycmoB0507