MELO3C025140.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C025140.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description60S ribosomal protein L35a
Locationchr10 : 9094051 .. 9096402 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACCTCATCGGCCGTCAAACACTCCATAGCTGAAGCAGAAACCCGCCGAAGATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGGTCTGTTATCTAAACCTTCCAAAAATCGATTCTTCTACTTCATTTTCAATGATTCTAACCCTAAAATTGTTTCATTGTTCTTCCGCTTATGTTTCTTGTTGGAATCAGACTCTACACCAGAGGAACAATTCTCGGCTACAAGAGGTACTTAAGCATTACAATATATTAACTCTATTATTTCATTCCACTTTCAACAATACTGCAATATGAATCTTTATAGAGTATTAGCATTTTAGTTTGTCATTTGTTTGAAAGCGAAAGATGATTGGTGTGGTGCTTAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAGAATGGTTCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGTATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAAATCCATGGTATATAAAATAGAACACTACCTCATTTGTTAGCGGCAGGCCTCCCTCTATCTTGGGTTTAACAAGTTCTTTTTTTGTACTTGTCTGTAGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGAGGTAACTAGTTTCTTTATAGGCTGGAAACCTCAAAATTTTTATATTTTCTCATTCTCTTCCCCCTCATGTTTGTATTAATGCTGTTCATTATGAGTTCTGTCTTTTGTGTTAAAGTGCGCTAGTCTAGTTTTCTAACTTCGATGGTACGAAATTGGTAGTTGAATTGCAATGTTCACCAATGTGGGTTTGATGTATGCCTTCACCAAATGCCTCATCAAGTAGGAGGTCTGCTTGCTTTCAATTAATCTAGGGATTTTGATTAAGTGGTTTTTTTGTTTTAACCAAGATGGGGAATGCAGATTTTGTTCAGAAATCAATAATTCATTGAAATTTGACAGATTATGTGAATTGTGACTGCCTGCACCTGTGCTTTCTATAATATTTAATAGTTATGTTTGGCCAATTAATGAACCTTAAAATATATGTGAACATGGGCCATTGTGGTGTTTTCTTTCATGGGCAGTTGCCAACTTGTTGTGGATGATGCAATCTTCCTGTGATTATGTTGAAAGGAACTTGTTATCTATCAGTCCCACCTTGAATTAGGATCTAAATCTTGTTTTGATTCCTCGTTTGTTTGTGTTTTGATAATGTTAAATTTACCTAATTGCAATAGCTTCAAGTTTTAATTTGTGGGTGAAGTGCAAACAGTGTAAGTAAAGACTGAACTGCATAACATCCGTTGTACCCGTCTACGAGTCTGTCTCAGAAAGGATAAATTTTTCCAATTAGATAAATCAAACATCATGTTTGAACCTTCACCTTGACCTTTTCTTTTCAATATAATTCTCCTATTTTTCTTAAGTATCTTTTATACATACATGTCTGTGAAGCAGTTGATTGGGCGTTGAAATGTTTTGAAATGGTCTCTATTATATATCTTATGAGTAATTTCGGTGCAAAATAACTTTGGTGGATTCTTTCTTATCTTAGGATAGTGGTAAATCAACAACGTGAGTTTGATGAGAGCTTTGATGGAATGATTGAGTTTAACTAATTGTAGCCGCGTACCTCGTATTTAATATCCTACTAGTTTTGGGTGGTATGTGCTAAAATAAGTGAGTGGCTTGTCCTAACACTCATCAATATTTGAGAAAAAGACAAACCGTTTTTCTTAGTATATTTTTCGAGGGCATGTTTTTCTAGTTTGTGGACGAGTAATGAATTTGTTGACTACATTGCACGATCTATGTTTCTATTTCAATATTGAATATTTAATTACAGGTTCTTTTTTATTCACCGTTGCTTATTTTGTCTTTGCAGCCTGGAGAACGGGATTGAAACAAGTGTTCGCTACATGATGGGATTTATATTTTTATTAAATTTCGTGAGCTAAGATAGAAGCATTTTATGTTTTCTGAACTGAATCAATTTTTGCTGTTTAGGTAATGTTTAACACCCGAGTAGTTAAAGCAGAATTATAGAACCATTTGTCTCGAGGATTGTCATGTGTTTAAGCGAATTGCACTTCTATCAAGTGGTTTTTCCGTATTAAAGTCTCTATGCACTTGCATTCTTTTAGCTATTATGAAGTTAGACTATAATTCTTACCGTAATTATTTGGTTATCCTTTCTATACCACTTATGTGTAAGGTTCGTTTTATTAAATTTACCTTTGATGTGTC

mRNA sequence

AGACCTCATCGGCCGTCAAACACTCCATAGCTGAAGCAGAAACCCGCCGAAGATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGAGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAGAATGGTTCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGTATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAAATCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGAGCCTGGAGAACGGGATTGAAACAAGTGTTCGCTACATGATGGGATTTATATTTTTATTAAATTTCGTGAGCTAAGATAGAAGCATTTTATGTTTTCTGAACTGAATCAATTTTTGCTGTTTAGGTAATGTTTAACACCCGAGTAGTTAAAGCAGAATTATAGAACCATTTGTCTCGAGGATTGTCATGTGTTTAAGCGAATTGCACTTCTATCAAGTGGTTTTTCCGTATTAAAGTCTCTATGCACTTGCATTCTTTTAGCTATTATGAAGTTAGACTATAATTCTTACCGTAATTATTTGGTTATCCTTTCTATACCACTTATGTGTAAGGTTCGTTTTATTAAATTTACCTTTGATGTGTC

Coding sequence (CDS)

ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGAGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAGAATGGTTCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGTATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAAATCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGA

Protein sequence

MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Homology
[Close]
BLAST of MELO3C025140.2 vs. NCBI nr
Match: XP_008463199.1 (PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo] >XP_011654980.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis sativus] >KGN50623.1 hypothetical protein Csa_5G198130 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 4.9e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. NCBI nr
Match: XP_022957040.1 (60S ribosomal protein L35a-1 [Cucurbita moschata] >XP_022978196.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_023529930.1 60S ribosomal protein L35a-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.7 bits (587), Expect = 2.4e-57
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKG QGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGSQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. NCBI nr
Match: XP_022156899.1 (60S ribosomal protein L35a-1 [Momordica charantia])

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-56
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGR+GERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGREGERVRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. NCBI nr
Match: XP_022139205.1 (60S ribosomal protein L35a-1-like [Momordica charantia])

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGR+GERVRLY RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. NCBI nr
Match: XP_022996736.1 (60S ribosomal protein L35a-1 [Cucurbita maxima] >XP_022996745.1 60S ribosomal protein L35a-1 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVAR HGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARAHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. TAIR10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 214.2 bits (544), Expect = 4.2e-56
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. TAIR10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 214.2 bits (544), Expect = 4.2e-56
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. TAIR10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 209.9 bits (533), Expect = 8.0e-55
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of MELO3C025140.2 vs. TAIR10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-54
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of MELO3C025140.2 vs. Swiss-Prot
Match: sp|Q9LMK0|R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 7.6e-55
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. Swiss-Prot
Match: sp|Q9C912|R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 7.6e-55
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. Swiss-Prot
Match: sp|Q9FZH0|R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-53
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of MELO3C025140.2 vs. Swiss-Prot
Match: sp|P51422|R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 1.9e-53
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of MELO3C025140.2 vs. Swiss-Prot
Match: sp|P41056|RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL33B PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 5.2e-27
Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 0 

Query: 8   ERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGS 67
           E  RLY +G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  GS
Sbjct: 3   ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGS 62

Query: 68  HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
             R +WGKV R HGNSG+VRA F++NLP K+ G  VR+F+YPSNI
Sbjct: 63  KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]
BLAST of MELO3C025140.2 vs. TrEMBL
Match: tr|A0A1S3CIN8|A0A1S3CIN8_CUCME (60S ribosomal protein L35a-1 OS=Cucumis melo OX=3656 GN=LOC103501409 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. TrEMBL
Match: tr|A0A0A0KM11|A0A0A0KM11_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198130 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. TrEMBL
Match: tr|A0A2P2JDG1|A0A2P2JDG1_RHIMU (60S ribosomal protein L35aA OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-55
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVN+K+EV+WY GKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKV RPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. TrEMBL
Match: tr|A0A118K457|A0A118K457_CYNCS (Ribosomal protein L35A OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_014648 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.3e-55
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSL+QIEGVN+K+EVSWYQGKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVSWYQGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVK+NGSHYRCIWGKV RPHGN+GIVRAKFKSNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KVKRNGSHYRCIWGKVTRPHGNTGIVRAKFKSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of MELO3C025140.2 vs. TrEMBL
Match: tr|A0A067FPF2|A0A067FPF2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033755mg PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.7e-55
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K++VSWY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

The following BLAST results are available for this feature:
BLAST of MELO3C025140.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463199.14.9e-58100.00PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo] >XP_011654980.1 PREDICTED... [more]
XP_022957040.12.4e-5799.1160S ribosomal protein L35a-1 [Cucurbita moschata] >XP_022978196.1 60S ribosomal ... [more]
XP_022156899.11.2e-5697.3260S ribosomal protein L35a-1 [Momordica charantia][more]
XP_022139205.11.6e-5696.4360S ribosomal protein L35a-1-like [Momordica charantia][more]
XP_022996736.11.6e-5698.2160S ribosomal protein L35a-1 [Cucurbita maxima] >XP_022996745.1 60S ribosomal pr... [more]
BLAST of MELO3C025140.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07070.14.2e-5688.39Ribosomal protein L35Ae family protein[more]
AT1G74270.14.2e-5688.39Ribosomal protein L35Ae family protein[more]
AT1G41880.18.0e-5586.49Ribosomal protein L35Ae family protein[more]
AT3G55750.11.0e-5486.49Ribosomal protein L35Ae family protein[more]
BLAST of MELO3C025140.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LMK0|R35A1_ARATH7.6e-5588.3960S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=... [more]
sp|Q9C912|R35A3_ARATH7.6e-5588.3960S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=... [more]
sp|Q9FZH0|R35A2_ARATH1.4e-5386.4960S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=... [more]
sp|P51422|R35A4_ARATH1.9e-5386.4960S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=... [more]
sp|P41056|RL33B_YEAST5.2e-2754.2960S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
BLAST of MELO3C025140.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CIN8|A0A1S3CIN8_CUCME3.2e-58100.0060S ribosomal protein L35a-1 OS=Cucumis melo OX=3656 GN=LOC103501409 PE=3 SV=1[more]
tr|A0A0A0KM11|A0A0A0KM11_CUCSA3.2e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198130 PE=3 SV=1[more]
tr|A0A2P2JDG1|A0A2P2JDG1_RHIMU3.3e-5593.7560S ribosomal protein L35aA OS=Rhizophora mucronata OX=61149 PE=3 SV=1[more]
tr|A0A118K457|A0A118K457_CYNCS4.3e-5592.86Ribosomal protein L35A OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_0146... [more]
tr|A0A067FPF2|A0A067FPF2_CITSI5.7e-5592.86Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033755mg PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf
IPR018266Ribosomal_L35Ae_CS
IPR001780Ribosomal_L35A
IPR038661L35A_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0042273 ribosomal large subunit biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025140.2.1MELO3C025140.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038661Ribosomal protein L35A superfamilyGENE3DG3DSA:2.40.10.190coord: 2..112
e-value: 1.4E-49
score: 168.4
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 12..106
e-value: 9.7E-45
score: 150.6
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 1..112
IPR001780Ribosomal protein L35APRODOMPD012670coord: 14..105
e-value: 8.0E-44
score: 440.0
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 14..106
score: 25.075
NoneNo IPR availablePANTHERPTHR10902:SF1060S RIBOSOMAL PROTEIN L35A-1-RELATEDcoord: 1..112
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 74..95
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILYSSF50447Translation proteinscoord: 12..106