CSPI05G10320 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G10320
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description60S ribosomal protein L35a
LocationChr5 : 8754942 .. 8757278 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATCGGCCGTCAAACACTCCATAGCTGAAGCAGAAACCCGCCGAAGATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGGTTTGTAATCTAAACCTTCAAAAATTCGATTCTTCAACATCATTTTCAATGATTCTAACCTAAAATTGTTTCATTGTTCTTCCGCTTTTGTTTCTTGTTGGAATCAGACTCTACACCAGGGGAACAATTCTCGGCTACAAGAGGTAGTTAAGCATTACTATATATTAACTCTATTCATTCATTCGACTTTGAACAATACTGGAATATGAATCTGTACAGAGTATTATCAATTTAGTTTGTCATTTGTTTGAAAGCTAAAGATGATTGGTGTGGTGCTTAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAAAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAAGTCCATGGTATATAAAATAGAACACTATCTCATGTGTTAGCGTCAGACCTCTCTCTATCTTGGGTTTAACAAGTTTTTTTTTTTTTTACTTTTCTGTAGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGAGGTAACTAGTTTCTTTATGTGCTGGAAACTTCTACATTTTTATATTTTTTCATTCTTTTCCCCCTCATGTTTGTATTAATGCTCAATGTGTTCATTATGGGTTGTCTTTTGTGTTAAAGTGCGCTAGTCTAGTTTTCTAACTTTGATGGTACGAAATTGGTAGTTGAATTGCAGTGTTCACCAATATGGGTTTGCTTTATGCGTTCACTAAATGCCTCACCAGTAGGTGGTTGCTTGCTATCAAATAATTTAGGGATTTTGATTAAGTAGTTTCTTTGTTTTAACCAATATGGGAATCCAGATTTTGGTTCAGTAATCAATAATTCATTGAAATTTGACTGATTATGTGAATCGTGACTGCCTGCGCATGTGCATTCTATAATGTTTAATAGTTATGTTTGGACATGGGCCATTGTGGTGTTTTCTTCATTGGTAGTTGCCAATTTCTTGTGGATAATGCCATCTTGCTGTGATTATGTTGAAACGAACATGTTATCTAGCAGTCCCACCTTGACTTAGGATCTAAATTTTGTCTTGATTCCTTGATTGTTTGTGTTTTGATAATGTTGAATTTATCTGATTGCAATAGTTTCAAGTTAATTTGTGGGTAAAGTGCGAACAGTATAAGTAAAGACTGTGAACTGCATAACGTCCGTTGTACCCTTCTTCTATGGGTCTGTCTCAGAAAGTATAAAATTTTCCAATTAGATAATTTAAACATCATGTTTGAACCTTCATCTTGACTTTCTCTTTTCAATATAATTTTCTTCTATTTTTCTCAAGTAATTTTTATACATACATGTTGTCTGTGAAGTAGTTGATTGGACGTTAAAATGTTTTGAAATGGTGTCTATTATATACCCTATGAGTAATTTGAGTGTAAAATAACTTTGGTGGATTCTTTCTTATCTTAGGATAGTGGTAAATAAACGACTTAAGTTTGATGATGGGCTTTGAGGGAATGGTCGAGTTTAACTGATGGTGGCTGCATACCTAGTATTTAATATCCTATAGTTTTCTTGACCTAAAAGTTGTAGGTTCAGGTGGGATGTTCTAAAATTAGTCTGAGTGGCTTCAACACTAACACTCACCATTATTGAAGAAAAAGGCAAACCATTTTTTTTAGTATATTTTTCAAGTGGCATATTTTTCTGGTTTGTTGACTACATTGCACGATCTATTTTTCTATTTCAAAATTGAATATTTAATTACATATGTTCATTTTTATTAACAGATGCTTATTTTGTCCTTGCAGCCTGGAGAACGGGATTGAAACAAGTGTTCGCTACATGAAGGGATTTAAATTTTTATTATATTTTGTGAGCTAAGATAGAAGCATTTTACGTTTCTGAACTGAGTCATTTTTTGCTGTTTAGGTAATGTTTAACACCCGAGTAGTTAAAACAGAATTATAGAACCATTTGTGTTGAGGATTGTCATGTGTTTAAGCCAATTGCACTTCTATCAAGTGGTTTTTCCGTATTAAAAGTCTCTATGCACATGCACTTCTTTAGCTATTATGAAGTCAGATTATGATTCTTATCGTAATTCTTTGGCTATCCTTTCTATACCACTTATGTGATTCACGTCATGACCTGACCTCTTGCTTGCAAA

mRNA sequence

ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAAAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGA

Coding sequence (CDS)

ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAAAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGA
Homology
[Close]
BLAST of CSPI05G10320 vs. Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.4e-55
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.4e-55
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 8.4e-54
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 1 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of CSPI05G10320 vs. Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-53
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 1 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of CSPI05G10320 vs. Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL33B PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-27
Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 1 

Query: 8   ERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGS 67
           E  RLY +G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  GS
Sbjct: 3   ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGS 62

Query: 68  HYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
             R +WGKV R HGNSG+VRA F++NLP K+ G  VR+F+YPSNI
Sbjct: 63  KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]
BLAST of CSPI05G10320 vs. TrEMBL
Match: A0A0A0KM11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G198130 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. TrEMBL
Match: A0A118K457_CYNCS (Ribosomal protein L35A OS=Cynara cardunculus var. scolymus GN=Ccrd_014648 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.4e-55
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSL+QIEGVN+K+EVSWYQGKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVSWYQGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVK+NGSHYRCIWGKV RPHGN+GIVRAKFKSNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KVKRNGSHYRCIWGKVTRPHGNTGIVRAKFKSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. TrEMBL
Match: A0A067FPF2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033755mg PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-55
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K++VSWY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. TrEMBL
Match: V4SM09_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033116mg PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-55
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K++VSWY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. TrEMBL
Match: I3NML8_HEVBR (60S ribosomal protein L35aA OS=Hevea brasiliensis GN=RPL35aA PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.1e-55
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKV RPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. TAIR10
Match: AT1G07070.1 (AT1G07070.1 Ribosomal protein L35Ae family protein)

HSP 1 Score: 214.9 bits (546), Expect = 2.5e-56
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. TAIR10
Match: AT1G74270.1 (AT1G74270.1 Ribosomal protein L35Ae family protein)

HSP 1 Score: 214.9 bits (546), Expect = 2.5e-56
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. TAIR10
Match: AT1G41880.1 (AT1G41880.1 Ribosomal protein L35Ae family protein)

HSP 1 Score: 210.7 bits (535), Expect = 4.7e-55
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 1 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of CSPI05G10320 vs. TAIR10
Match: AT3G55750.1 (AT3G55750.1 Ribosomal protein L35Ae family protein)

HSP 1 Score: 210.3 bits (534), Expect = 6.2e-55
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 1 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of CSPI05G10320 vs. NCBI nr
Match: gi|659126471|ref|XP_008463199.1| (PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. NCBI nr
Match: gi|976922598|gb|KVI06973.1| (Ribosomal protein L35A [Cynara cardunculus var. scolymus])

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-55
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSL+QIEGVN+K+EVSWYQGKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVSWYQGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVK+NGSHYRCIWGKV RPHGN+GIVRAKFKSNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KVKRNGSHYRCIWGKVTRPHGNTGIVRAKFKSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. NCBI nr
Match: gi|567886082|ref|XP_006435563.1| (hypothetical protein CICLE_v10033116mg [Citrus clementina])

HSP 1 Score: 223.0 bits (567), Expect = 2.6e-55
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K++VSWY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. NCBI nr
Match: gi|823243288|ref|XP_012454296.1| (PREDICTED: 60S ribosomal protein L35a-1 [Gossypium raimondii])

HSP 1 Score: 222.2 bits (565), Expect = 4.5e-55
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKV RPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of CSPI05G10320 vs. NCBI nr
Match: gi|728828408|gb|KHG07851.1| (60S ribosomal L35a-1 -like protein [Gossypium arboreum])

HSP 1 Score: 222.2 bits (565), Expect = 4.5e-55
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKA
Sbjct: 51  MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 110

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKV RPHGNSG+VRAKFKSNLPPKSMGDRVRVFMYPSNI
Sbjct: 111 KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 162

The following BLAST results are available for this feature:
BLAST of CSPI05G10320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
R35A1_ARATH4.4e-5588.3960S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1[more]
R35A3_ARATH4.4e-5588.3960S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=3 SV=1[more]
R35A2_ARATH8.4e-5486.4960S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1[more]
R35A4_ARATH1.1e-5386.4960S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2[more]
RL33B_YEAST3.9e-2754.2960S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
BLAST of CSPI05G10320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM11_CUCSA1.0e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G198130 PE=4 SV=1[more]
A0A118K457_CYNCS1.4e-5592.86Ribosomal protein L35A OS=Cynara cardunculus var. scolymus GN=Ccrd_014648 PE=4 S... [more]
A0A067FPF2_CITSI1.8e-5592.86Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033755mg PE=4 SV=1[more]
V4SM09_9ROSI1.8e-5592.86Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033116mg PE=4 SV=1[more]
I3NML8_HEVBR3.1e-5591.9660S ribosomal protein L35aA OS=Hevea brasiliensis GN=RPL35aA PE=2 SV=1[more]
BLAST of CSPI05G10320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07070.12.5e-5688.39 Ribosomal protein L35Ae family protein[more]
AT1G74270.12.5e-5688.39 Ribosomal protein L35Ae family protein[more]
AT1G41880.14.7e-5586.49 Ribosomal protein L35Ae family protein[more]
AT3G55750.16.2e-5586.49 Ribosomal protein L35Ae family protein[more]
BLAST of CSPI05G10320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126471|ref|XP_008463199.1|1.5e-58100.00PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo][more]
gi|976922598|gb|KVI06973.1|2.0e-5592.86Ribosomal protein L35A [Cynara cardunculus var. scolymus][more]
gi|567886082|ref|XP_006435563.1|2.6e-5592.86hypothetical protein CICLE_v10033116mg [Citrus clementina][more]
gi|823243288|ref|XP_012454296.1|4.5e-5591.96PREDICTED: 60S ribosomal protein L35a-1 [Gossypium raimondii][more]
gi|728828408|gb|KHG07851.1|4.5e-5591.9660S ribosomal L35a-1 -like protein [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001780Ribosomal_L35A
IPR009000Transl_B-barrel_sf
IPR018266Ribosomal_L35Ae_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0008643 carbohydrate transport
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G10320.1CSPI05G10320.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001780Ribosomal protein L35APRODOMPD012670coord: 14..105
score: 8.0
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 1..112
score: 2.5
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 12..106
score: 1.0
IPR009000Translation protein, beta-barrel domainunknownSSF50447Translation proteinscoord: 12..106
score: 1.06
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 74..95
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G10320Cla004317Watermelon (97103) v1cpiwmB395
CSPI05G10320Csa5G198130Cucumber (Chinese Long) v2cpicuB240
CSPI05G10320MELO3C025140Melon (DHL92) v3.5.1cpimeB361
CSPI05G10320ClCG07G003850Watermelon (Charleston Gray)cpiwcgB420
CSPI05G10320Lsi04G009490Bottle gourd (USVL1VR-Ls)cpilsiB366
CSPI05G10320MELO3C025140.2Melon (DHL92) v3.6.1cpimedB352
CSPI05G10320CsaV3_5G008790Cucumber (Chinese Long) v3cpicucB285
CSPI05G10320Cla97C07G132330Watermelon (97103) v2cpiwmbB412
CSPI05G10320Bhi07G000550Wax gourdcpiwgoB517
CSPI05G10320Cucsa.164670Cucumber (Gy14) v1cgycpiB258
CSPI05G10320CmaCh04G001740Cucurbita maxima (Rimu)cmacpiB757
CSPI05G10320CmaCh04G011430Cucurbita maxima (Rimu)cmacpiB756
CSPI05G10320CmoCh04G012100Cucurbita moschata (Rifu)cmocpiB746
CSPI05G10320CmoCh04G001760Cucurbita moschata (Rifu)cmocpiB747
CSPI05G10320Cp4.1LG01g05150Cucurbita pepo (Zucchini)cpecpiB438
CSPI05G10320Cp4.1LG01g11100Cucurbita pepo (Zucchini)cpecpiB437
CSPI05G10320CsGy5G007670Cucumber (Gy14) v2cgybcpiB226
CSPI05G10320Carg00242Silver-seed gourdcarcpiB0706
CSPI05G10320Carg18350Silver-seed gourdcarcpiB0102
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G10320Cucumber (Chinese Long) v3cpicucB305
CSPI05G10320Watermelon (97103) v2cpiwmbB381
CSPI05G10320Watermelon (97103) v2cpiwmbB394
CSPI05G10320Wax gourdcpiwgoB494
CSPI05G10320Wild cucumber (PI 183967)cpicpiB120
CSPI05G10320Wild cucumber (PI 183967)cpicpiB154
CSPI05G10320Wild cucumber (PI 183967)cpicpiB179
CSPI05G10320Cucumber (Gy14) v1cgycpiB196
CSPI05G10320Cucurbita maxima (Rimu)cmacpiB229
CSPI05G10320Cucurbita maxima (Rimu)cmacpiB302
CSPI05G10320Cucurbita maxima (Rimu)cmacpiB685
CSPI05G10320Cucurbita maxima (Rimu)cmacpiB774
CSPI05G10320Cucurbita moschata (Rifu)cmocpiB294
CSPI05G10320Cucurbita moschata (Rifu)cmocpiB677
CSPI05G10320Cucurbita moschata (Rifu)cmocpiB763
CSPI05G10320Cucumber (Chinese Long) v2cpicuB230
CSPI05G10320Cucumber (Chinese Long) v2cpicuB256
CSPI05G10320Melon (DHL92) v3.5.1cpimeB391
CSPI05G10320Melon (DHL92) v3.5.1cpimeB394
CSPI05G10320Melon (DHL92) v3.5.1cpimeB408
CSPI05G10320Watermelon (Charleston Gray)cpiwcgB361
CSPI05G10320Watermelon (97103) v1cpiwmB448
CSPI05G10320Watermelon (97103) v1cpiwmB374
CSPI05G10320Watermelon (97103) v1cpiwmB393
CSPI05G10320Cucurbita pepo (Zucchini)cpecpiB079
CSPI05G10320Cucurbita pepo (Zucchini)cpecpiB194
CSPI05G10320Cucurbita pepo (Zucchini)cpecpiB457
CSPI05G10320Bottle gourd (USVL1VR-Ls)cpilsiB345
CSPI05G10320Bottle gourd (USVL1VR-Ls)cpilsiB365
CSPI05G10320Melon (DHL92) v3.6.1cpimedB385
CSPI05G10320Melon (DHL92) v3.6.1cpimedB406
CSPI05G10320Cucumber (Gy14) v2cgybcpiB181
CSPI05G10320Cucumber (Gy14) v2cgybcpiB283
CSPI05G10320Silver-seed gourdcarcpiB0296
CSPI05G10320Silver-seed gourdcarcpiB1038