MELO3C025072.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATCGTAAAAATACTCCCGAAAACGTCCTTAAATTAATATATAATTAAAGTGGGTTTTTTCTTCTCTTTGCAAGTTATGCTTCATTTCTCCGCTAGTTCTTCTCCGTAACCCCTCCGTTTAAGCTTTCTGCTCTTTCTTCATCTCTCTCCCTAAGAATTTCTTATCATATTTAAATGGAATCGTAATCCGTGTGATTTTTCTTCATAGTCCCGTAAGATGGGAGTGCTGTCCAATAAGATTTCAAGGGAGGAATTGAAACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGTTTCTCCTCATTATCTTTCTTCTAGATTTCTTTTTTTTATTGTTTTGTTCCAATCTTGGCGTAGTTTTCTTTTTACCCTTTTGCATTTTGTACCCATTTTGTATTCTCTGGTTTGCCATCAATTGCGTAATTGCATTCTGACATCACTACTCATGACTGCTATATTGTTTTTCTTTCATGGGTATTCGATTTTCTCTTAGAAGTTGTCATTTAATCGTCGTTTGTGTAAATTGAAATTTATCGGGAGTAGATTTGGGTATTTTTCTTGAACTACCAGGGGTGGGAAGGGATGGCGTTGAATAATTTATCCTAATTTCTTTGATTATGAATCTTAACTCGTTAGTATATTATATAAATCTGAAGAGATTGGATTCCCATTGCTCTCATGACTTTCCAGTGGAGTTGCTTATGAATTAAGTAAAAAAATAAAAATAAATAAAATAAAAGAAAATAAAAGAAAAGAAAAATCCCCTAAATGTAAGCGACTCATATGGAGGAACTCTTATCCACTTTTGGCTACTTGATTTTGTATTGTTTTCACTTTACGAACAGGCCCAAATCTTTTTTTTTTTTAAGAGGGGCGAAATTTTATGTTTTAACATTTTGTGTATAAAATGTTCGAACCCAAAAAATTTAGTGGGAAAATTAGATGAAAAGCTATAAAATCAGCCTTTATATTCTAGTTTTAAATCTAAGATAAATTTGGAGTAATTAGTCCCGCTCTCCAAGTTTTTTGGAGTAATTACTCCCTCTCTCCAAGTTTAAGGTCTCCCTCCATTTACCAGAAATGAAATTTTATGTTGTTATTCCCAAGTTCTCTGTCTTTGGGCTTGAGCAATACCTTATCTATGTCTCTCTTCGTTGTGTAATACTTAGTTACTTCTATAGCAATAGGATTAACACGTTTGTATCCAGATATGTTATACTGTGAAGTAAAGTGATGGTATAAGTTATTAGTTAACCCACTTCCTAGATGCAATAATTTGGTGATTGTATGTTTTATGCTGATATGACTGATGTGTTTGCTCTACTTCTCAAATTCTTTGTATATGCCACTCAAGTCCGCCTTTTCTGCTGCTGGGGTCCAGCTTCTTTTTGATTGATATATATAAATCATTCTTCCCTCTTCACAGATTTGTGCTTAATTGGCCTTCCACTTACAGTGATGGTATTGTATATTCTTGACATCATGGAGAAATTTATTTATTTGCTGGACAGCGACATTGGACATTCTGTTTAGGTCGGGACTTGGGAGGCCGTGTGATTGGTCCATTACTTTTATGTTTAAAGTGGCTTTGAAAGCTATTACATAATAGCTTTCCTAGTGTGTAATGAATTTGTATGTGCGCTTTCTTTTGAGAGGAAAAGTGAACGAGGCACAGGAAGGATTTTTCTTAATCTATTGCCGCATGTTGGTCGAATATCATAGAGGAAATCCTTGAGAATATGGAAATGCGGGGAAAAATATCGTTCTTAAGTGACTCATTAATCCCGTAGAAGTTTCTCTTTAAATGCTACAACTTTTGTAAGTAATCAATTCTGGATGTGAATATTGTCATTTTGACTTGTCTACTTATACTACTTCAGGGATTTTTATTGGTGATGGAAAAGTGATCCACTTCACTCGGGGAGGAGGCCTGGAGATCGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTCCTCACTCTCCAGACAATCCATGTCCTGTATGTGGTGATCAGTCATTTGGTGATGGCGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGAGATCTTTACATCTTTGAATATGGTGTCACGCCTATGTTCTTTCTCGCGAAAGCCCGTGGCGGGACTTGCACTCTTGCTTCTTCTGATTTGTCTGAAGTTGTCCTACATCGCGCTTCTTTTCTCCTTCAAAATGGATTTGGTATGTACAACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACGACCCTCAGCGTTGGTAGGAGCGGACAGGCTGCATCATTCCTTGCAGCCACGAGTGCGATTGTCTCTTCACCACTTCGATATTTAACCACAAGTTGTAGCGGTCTAGCGCTTGTGGGTGTGGGCACGTATTGTGTTAGTCGACTTGTTTCTGACATTGGAGTGCGTCGTGATGTCGTTAAAATCCCGGTCGAGGAACTTGTGGCTAGAGCTAGCAGCAGCAATGCTCCAGAGGAGGCAACACTAACGGCCAAGGAACAATAGTGTTATTGTTGGCTTCGACTAAACCAAAGAATTGTCTTGAAAGTGTGAAAAACCAATTCTTAATTACTCCCTTGTAATAATTGTATTGGAATTTGTATCCACATTGTTGAAACTAAACTTTGGTTATGTTGCAAGTTATCTGTCACTGATTTGTGGTTCTTGTTGTTTATTAATCTTCTATATACGTAGAATCCACTATCTAATCCCTAATCAACTAATACAATTTGATTAGGAAGGAGAGGGTCATCAATCTAATTATATTTGGTTTCTAAGTTGGATTTACACCATCATTTTTTACTAACTTTCCATCG TAATCGTAAAAATACTCCCGAAAACGTCCTTAAATTAATATATAATTAAAGTGGGTTTTTTCTTCTCTTTGCAAGTTATGCTTCATTTCTCCGCTAGTTCTTCTCCGTAACCCCTCCGTTTAAGCTTTCTGCTCTTTCTTCATCTCTCTCCCTAAGAATTTCTTATCATATTTAAATGGAATCGTAATCCGTGTGATTTTTCTTCATAGTCCCGTAAGATGGGAGTGCTGTCCAATAAGATTTCAAGGGAGGAATTGAAACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGGATTTTTATTGGTGATGGAAAAGTGATCCACTTCACTCGGGGAGGAGGCCTGGAGATCGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTCCTCACTCTCCAGACAATCCATGTCCTGTATGTGGTGATCAGTCATTTGGTGATGGCGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGAGATCTTTACATCTTTGAATATGGTGTCACGCCTATGTTCTTTCTCGCGAAAGCCCGTGGCGGGACTTGCACTCTTGCTTCTTCTGATTTGTCTGAAGTTGTCCTACATCGCGCTTCTTTTCTCCTTCAAAATGGATTTGGTATGTACAACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACGACCCTCAGCGTTGGTAGGAGCGGACAGGCTGCATCATTCCTTGCAGCCACGAGTGCGATTGTCTCTTCACCACTTCGATATTTAACCACAAGTTGTAGCGGTCTAGCGCTTGTGGGTGTGGGCACGTATTGTGTTAGTCGACTTGTTTCTGACATTGGAGTGCGTCGTGATGTCGTTAAAATCCCGGTCGAGGAACTTGTGGCTAGAGCTAGCAGCAGCAATGCTCCAGAGGAGGCAACACTAACGGCCAAGGAACAATAGTGTTATTGTTGGCTTCGACTAAACCAAAGAATTGTCTTGAAAGTGTGAAAAACCAATTCTTAATTACTCCCTTGTAATAATTGTATTGGAATTTGTATCCACATTGTTGAAACTAAACTTTGGTTATGTTGCAAGTTATCTGTCACTGATTTGTGGTTCTTGTTGTTTATTAATCTTCTATATACGTAGAATCCACTATCTAATCCCTAATCAACTAATACAATTTGATTAGGAAGGAGAGGGTCATCAATCTAATTATATTTGGTTTCTAAGTTGGATTTACACCATCATTTTTTACTAACTTTCCATCG ATGGGAGTGCTGTCCAATAAGATTTCAAGGGAGGAATTGAAACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGGATTTTTATTGGTGATGGAAAAGTGATCCACTTCACTCGGGGAGGAGGCCTGGAGATCGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTCCTCACTCTCCAGACAATCCATGTCCTGTATGTGGTGATCAGTCATTTGGTGATGGCGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGAGATCTTTACATCTTTGAATATGGTGTCACGCCTATGTTCTTTCTCGCGAAAGCCCGTGGCGGGACTTGCACTCTTGCTTCTTCTGATTTGTCTGAAGTTGTCCTACATCGCGCTTCTTTTCTCCTTCAAAATGGATTTGGTATGTACAACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACGACCCTCAGCGTTGGTAGGAGCGGACAGGCTGCATCATTCCTTGCAGCCACGAGTGCGATTGTCTCTTCACCACTTCGATATTTAACCACAAGTTGTAGCGGTCTAGCGCTTGTGGGTGTGGGCACGTATTGTGTTAGTCGACTTGTTTCTGACATTGGAGTGCGTCGTGATGTCGTTAAAATCCCGGTCGAGGAACTTGTGGCTAGAGCTAGCAGCAGCAATGCTCCAGAGGAGGCAACACTAACGGCCAAGGAACAATAG MGVLSNKISREELKPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSSPHSPDNPCPVCGDQSFGDGVICSCLDCFLGGGDLYIFEYGVTPMFFLAKARGGTCTLASSDLSEVVLHRASFLLQNGFGMYNIFKNNCEDFAIYCKTGLLVYTTLSVGRSGQAASFLAATSAIVSSPLRYLTTSCSGLALVGVGTYCVSRLVSDIGVRRDVVKIPVEELVARASSSNAPEEATLTAKEQ
BLAST of MELO3C025072.2 vs. NCBI nr
Match: XP_008463130.1 (PREDICTED: uncharacterized protein LOC103501354 [Cucumis melo]) HSP 1 Score: 511.9 bits (1317), Expect = 1.2e-141 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of MELO3C025072.2 vs. NCBI nr
Match: XP_004148910.1 (PREDICTED: uncharacterized protein LOC101207610 isoform X1 [Cucumis sativus] >KGN50893.1 hypothetical protein Csa_5G315380 [Cucumis sativus]) HSP 1 Score: 490.7 bits (1262), Expect = 2.9e-135 Identity = 242/254 (95.28%), Postives = 247/254 (97.24%), Query Frame = 0
BLAST of MELO3C025072.2 vs. NCBI nr
Match: XP_022993748.1 (uncharacterized protein LOC111489658 [Cucurbita maxima]) HSP 1 Score: 470.3 bits (1209), Expect = 4.1e-129 Identity = 231/255 (90.59%), Postives = 244/255 (95.69%), Query Frame = 0
BLAST of MELO3C025072.2 vs. NCBI nr
Match: XP_022939709.1 (uncharacterized protein LOC111445514 [Cucurbita moschata]) HSP 1 Score: 469.2 bits (1206), Expect = 9.1e-129 Identity = 230/255 (90.20%), Postives = 244/255 (95.69%), Query Frame = 0
BLAST of MELO3C025072.2 vs. NCBI nr
Match: XP_023551498.1 (uncharacterized protein LOC111809286 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 464.5 bits (1194), Expect = 2.3e-127 Identity = 228/255 (89.41%), Postives = 243/255 (95.29%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TAIR10
Match: AT3G02700.1 (NC domain-containing protein-related) HSP 1 Score: 335.5 bits (859), Expect = 2.9e-92 Identity = 164/236 (69.49%), Postives = 192/236 (81.36%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TAIR10
Match: AT5G06370.1 (NC domain-containing protein-related) HSP 1 Score: 293.5 bits (750), Expect = 1.2e-79 Identity = 143/241 (59.34%), Postives = 175/241 (72.61%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TAIR10
Match: AT5G16360.1 (NC domain-containing protein-related) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-72 Identity = 145/269 (53.90%), Postives = 176/269 (65.43%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TAIR10
Match: AT1G01225.1 (NC domain-containing protein-related) HSP 1 Score: 258.1 bits (658), Expect = 5.8e-69 Identity = 131/238 (55.04%), Postives = 164/238 (68.91%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TAIR10
Match: AT5G16330.1 (NC domain-containing protein-related) HSP 1 Score: 256.9 bits (655), Expect = 1.3e-68 Identity = 133/240 (55.42%), Postives = 167/240 (69.58%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TrEMBL
Match: tr|A0A1S3CII0|A0A1S3CII0_CUCME (uncharacterized protein LOC103501354 OS=Cucumis melo OX=3656 GN=LOC103501354 PE=4 SV=1) HSP 1 Score: 511.9 bits (1317), Expect = 8.1e-142 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TrEMBL
Match: tr|A0A0A0KMS7|A0A0A0KMS7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315380 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 1.9e-135 Identity = 242/254 (95.28%), Postives = 247/254 (97.24%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TrEMBL
Match: tr|A0A2P2J852|A0A2P2J852_RHIMU (NC domain-containing family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-106 Identity = 199/253 (78.66%), Postives = 221/253 (87.35%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TrEMBL
Match: tr|A0A1Q3B136|A0A1Q3B136_CEPFO (LRAT domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05242 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.2e-105 Identity = 197/255 (77.25%), Postives = 218/255 (85.49%), Query Frame = 0
BLAST of MELO3C025072.2 vs. TrEMBL
Match: tr|W9REN8|W9REN8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007793 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 1.4e-104 Identity = 190/254 (74.80%), Postives = 214/254 (84.25%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|