Cla009108 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009108
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	NC domain-containing protein (AHRD V1 ***- D7KZK3_ARALL); contains Interpro domain(s) IPR007053 NC
Location	Chr1 : 22519981 .. 22522206 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTGCTGTCGAATAAGATTTCAAGGGAGGAATTGAGACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGTTTCGTCTCATTCTCTTTTTTCTCCATTTCTTATTTTTTGATTTTGTTCTAATTTGGGTGTAGTTTTCTTTTACCCTTTTGCATTTTATATCCATTTCGTATGCTCTGGTTTGCCCTCAATTGCGTAACTGCATTCTGGAACCACTACCCATGATTGTTGCATTGTTTTTCTTTGATGGGCATTTTGATTTTCTTTTAGAAATTTTCATTTCATTGTTGTTTGTGTTGTTTGAAAGTCATCGGATCTATGGGGGTGGGTAGAGATGGTGATGGCTATAATTTATGCTAATTTCTTTGATTATGAATTTCAACACATTAATATATTGTATAAATCTGAAGAGATTGAATTCCCATTGCTCTGCTGAATATCCAGTGAAGTTTCTTATGAATTAAGGAAAAAAAAATCCCTTGAATGAAGTGACCCATATGGAGGATTTCTTATTCACTTTTGGCTACTTGATTTTGTATTATTTTCACTTTTACGAGCAGGACCGAATCTTTTCTTTTTATATAAGAGGCAAAATTTTATATTGCAACTTTTTGTGTATAAATTGTTGGAAACCAAAAAAATTAGAGGGAAAACTAGATGAAAATCTGTAAAATCTAGCCTTTATATTCAAGTTTTAAATCTAAGATAAATTAGTAGTAATTACTCCCCCTTTCCAAGTTTTTTCTTTCCCTTACGGTCTCCCTCCATTTACCATAAATGAAATTTTATGTTGTTACTCCAAAGTTCTTTGTATTTGGGCTTGAGCAATATCTTATCTTCTATGTCTTTCTTTGTTGTATAATACATAATTTTATCTCTAGTAATAGAATTAACACGTTTATATCCAGATATGTTCTCCTGTGAACAAATTGGGGAGGTGATGTGATATGTTCTCCTTCTCCTGTTTGCTCTACTTCTCAAAGTCTTTGAATATGGCACTCAAAGTCTGCTTTTTGGTTGATATATAGAATTATTCATCCCTTTCAGATTTGTGCATAATTGGCCTTCCACTTAGAGTGATGGAATTGTATATTCTTGACATCATGGAAAAATTTATTTATTTGCTGGACAGCGGCATCGAACATTCTTTCTAGGTCGGGTGGCCATGGGATTGGTTCATTACTTAGATGTTTAAAGTGGCTTTGAAAGCTATTAGATAATAGTTTTCCTAGTGTGCGTTTTGAGGTTATCTTTTCTAATGAACGTGTATTTGCTCTTTCCTTTGAGTGGGAAAGTCAGAAGTTGATGAGGCAGAGGAAGGTTTTTTCTTAACGTATTGTTGCATGTTGATCAAATAACATAGAGGAAATTCCTTGTGAATATGAAAAGGTGTGGAAATATATCATTCTTAAGTGACTCATTGATCCCAATTATCAGTAGAAGTCTCTCTTTAAATGCTACAACTTTTGTAAGTAATCAGTTCTAAGTGATGAATATTGGCATTTTGACTTGGTTACTTATATTACTCCAGGGATTTTTATTGGTGATGGAAAGGTGATCCACTTCACTCGGGGAGGAGGCTTGGAGATTGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCGGACAATCCATGTCCTGTATGTGGTGATCAATCAAGTGGTGATGGTGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGTGATCTTTACATCTTTGAATATGGTGTCACGCCAGCGTTCTTTCTCGCAAAGGCCCGTGGTGGGACTTGCACTCTTGCTTCTTCTGATTCGTCCGAAGTTGTCCTTCATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACCCTCAGCATCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATATTTAACTACTAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGCGCTAGTCGATTTGTATCAGACATCGGAGTGCGCCGTGATGTTGTTAAAATCCCAGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTCCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAG

mRNA sequence

ATGGGAGTGCTGTCGAATAAGATTTCAAGGGAGGAATTGAGACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGGATTTTTATTGGTGATGGAAAGGTGATCCACTTCACTCGGGGAGGAGGCTTGGAGATTGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCGGACAATCCATGTCCTGTATGTGGTGATCAATCAAGTGGTGATGGTGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGTGATCTTTACATCTTTGAATATGGTGTCACGCCAGCGTTCTTTCTCGCAAAGGCCCGTGGTGGGACTTGCACTCTTGCTTCTTCTGATTCGTCCGAAGTTGTCCTTCATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACCCTCAGCATCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATATTTAACTACTAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGCGCTAGTCGATTTGTATCAGACATCGGAGTGCGCCGTGATGTTGTTAAAATCCCAGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTCCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAG

Coding sequence (CDS)

ATGGGAGTGCTGTCGAATAAGATTTCAAGGGAGGAATTGAGACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGGATTTTTATTGGTGATGGAAAGGTGATCCACTTCACTCGGGGAGGAGGCTTGGAGATTGGCTCAGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCGGACAATCCATGTCCTGTATGTGGTGATCAATCAAGTGGTGATGGTGTAATCTGTTCGTGTTTGGATTGTTTTCTTGGTGGTGGTGATCTTTACATCTTTGAATATGGTGTCACGCCAGCGTTCTTTCTCGCAAAGGCCCGTGGTGGGACTTGCACTCTTGCTTCTTCTGATTCGTCCGAAGTTGTCCTTCATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACCCTCAGCATCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATATTTAACTACTAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGCGCTAGTCGATTTGTATCAGACATCGGAGTGCGCCGTGATGTTGTTAAAATCCCAGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTCCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAG

Protein sequence

MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSSTHSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGTCTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAASFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVSSSNAPEEATQTAKEE

Homology

[Close]

BLAST of Cla009108 vs. TrEMBL
Match: A0A0A0KMS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315380 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 5.8e-134
Identity = 236/254 (92.91%), Postives = 243/254 (95.67%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MGVLSNKISREEL+PGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF
Sbjct: 1   MGVLSNKISREELKPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60

Query: 61  LVSSSTHSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGTC 120
           LVSSS HSPD+PCPVCGDQS GDGVICSCLDCFL GGDLYIFEYGVTP FFLAKARGGTC
Sbjct: 61  LVSSSPHSPDSPCPVCGDQSLGDGVICSCLDCFLAGGDLYIFEYGVTPVFFLAKARGGTC 120

Query: 121 TLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAAS 180
           TLASSDSSEVVLHRASFL QNGFGMY+IFKNNCEDFAIYCKTGLLVYTTLS+GRSGQAAS
Sbjct: 121 TLASSDSSEVVLHRASFLFQNGFGMYNIFKNNCEDFAIYCKTGLLVYTTLSVGRSGQAAS 180

Query: 181 FLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVSS 240
           FLAATSAI+SSPLRYLTTSCSGLALVG+G YC SR VSDIGVRRDVVKIPVEELVAR SS
Sbjct: 181 FLAATSAIISSPLRYLTTSCSGLALVGLGTYCVSRLVSDIGVRRDVVKIPVEELVARASS 240

Query: 241 SNAPEEATQTAKEE 255
           SN PEEA QTAKE+
Sbjct: 241 SNTPEEAPQTAKEK 254

[Close]

BLAST of Cla009108 vs. TrEMBL
Match: M5XB55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010318mg PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.0e-106
Identity = 189/255 (74.12%), Postives = 217/255 (85.10%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MGVLSNKI R++LRPGDHIYSWR+AY+YAHHGI++G+GKVIHFTRG G EIG+GTVLDR 
Sbjct: 1   MGVLSNKIQRDQLRPGDHIYSWRRAYLYAHHGIYVGEGKVIHFTRGAGQEIGTGTVLDRI 60

Query: 61  LVSSS-THSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGT 120
           + SSS +HSPDNPCP CGDQSS DGV+ SC+DCFL GGDLY+FEYGV  AFF+AKARGGT
Sbjct: 61  IFSSSPSHSPDNPCPKCGDQSSLDGVMSSCIDCFLSGGDLYLFEYGVNAAFFIAKARGGT 120

Query: 121 CTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAA 180
           CTLA+SD  + VLHRA +LLQNGFG Y IFKNNCEDFAIYCKTGLLVYT++S+GRSGQAA
Sbjct: 121 CTLAASDPQQDVLHRAFYLLQNGFGSYDIFKNNCEDFAIYCKTGLLVYTSISVGRSGQAA 180

Query: 181 SFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVS 240
           SFLAA SA++SSPLR+LTTS +GL  VG GMYC SR VSDIG+RRDV+KIPVE L A   
Sbjct: 181 SFLAAASAVISSPLRFLTTSFTGLGAVGCGMYCVSRLVSDIGIRRDVIKIPVERLTAPCG 240

Query: 241 SSNAPEEATQTAKEE 255
              A E AT+  K +
Sbjct: 241 LDEA-EFATEVVKTD 254

[Close]

BLAST of Cla009108 vs. TrEMBL
Match: W9REN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007793 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 8.7e-106
Identity = 188/254 (74.02%), Postives = 214/254 (84.25%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MGV SNKI +++L+PGDHIYSWR AY+YAHHGI++G+GKVIHFTRGGG EIG+GT LDR 
Sbjct: 1   MGVFSNKIDKDQLKPGDHIYSWRHAYLYAHHGIYVGEGKVIHFTRGGGQEIGTGTFLDRI 60

Query: 61  LVSSS-THSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGT 120
           + SSS +HS DNPCP CGDQS   GVICSCLDCFL GG+LY+FEYGV PAFF+AKARGGT
Sbjct: 61  IFSSSPSHSVDNPCPRCGDQSRLSGVICSCLDCFLWGGELYLFEYGVNPAFFIAKARGGT 120

Query: 121 CTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAA 180
           CTLA SD  EVVLHRAS+LLQNGFG+Y IFKNNCEDFAIYCKTGLLV TT S+GRSGQAA
Sbjct: 121 CTLAPSDPQEVVLHRASYLLQNGFGVYDIFKNNCEDFAIYCKTGLLVSTTFSVGRSGQAA 180

Query: 181 SFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVS 240
           SF+A  S+I+SSPLR+LTTSCSGLA VG GMYC +R VSDIGVRRDV K+ VE LVA   
Sbjct: 181 SFVAMASSIISSPLRFLTTSCSGLAAVGCGMYCINRLVSDIGVRRDVTKVSVERLVAH-- 240

Query: 241 SSNAPEEATQTAKE 254
                E +T+T K+
Sbjct: 241 PGLVSEASTETVKD 252

[Close]

BLAST of Cla009108 vs. TrEMBL
Match: A9P901_POPTR (NC domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s07690g PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.6e-104
Identity = 191/254 (75.20%), Postives = 210/254 (82.68%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MG+LSNKI RE L+PGDHIYSWR AY+YAHHGI++GD  VIHFTRG G EIG+GTVLDRF
Sbjct: 1   MGLLSNKIDREVLKPGDHIYSWRNAYLYAHHGIYVGDETVIHFTRGAGQEIGTGTVLDRF 60

Query: 61  LVSSS-THSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGT 120
           + SSS +H  DNPCP CGDQS  DGVI SC+DCFL GGDLY+FEY V+PA FLAK RGGT
Sbjct: 61  VFSSSPSHPSDNPCPKCGDQSRLDGVISSCIDCFLSGGDLYLFEYDVSPALFLAKPRGGT 120

Query: 121 CTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAA 180
           CTLA SD  E VLHRASFLLQNGFG YHIFKNNCEDFAIYCKTGLL+ T +S+GRSGQAA
Sbjct: 121 CTLAKSDPPEDVLHRASFLLQNGFGGYHIFKNNCEDFAIYCKTGLLIITNISVGRSGQAA 180

Query: 181 SFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVS 240
           +FLAATSA+VSSPLR+LT S SGLA+VG GMYC  R VSDIGVRRDV KIPVE+LVA  S
Sbjct: 181 TFLAATSAVVSSPLRFLTASFSGLAVVGYGMYCVGRLVSDIGVRRDVCKIPVEQLVAS-S 240

Query: 241 SSNAPEEATQTAKE 254
             N  E     AKE
Sbjct: 241 RRNESEVVADLAKE 253

[Close]

BLAST of Cla009108 vs. TrEMBL
Match: A0A0B2S5M0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016899 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.6e-104
Identity = 188/255 (73.73%), Postives = 216/255 (84.71%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MGVLSN I RE+L+PGDHIYSWRQAYIYAHHGI++GDG VIHFTRG G EIG+GTVLD  
Sbjct: 1   MGVLSNMIDREQLKPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDNL 60

Query: 61  LVSSS-THSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGT 120
           L SSS +HS D PCP CGDQ+  DGVI SCLDCFL GG+LYIFEYGV+PAFFLAKARGGT
Sbjct: 61  LFSSSPSHSSDTPCPRCGDQTRTDGVISSCLDCFLYGGNLYIFEYGVSPAFFLAKARGGT 120

Query: 121 CTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAA 180
           CTLA SD +E VLHR+SFLL+NGFG+Y+IFKNNCEDFAIYCKTGLLV T++S+GRSGQAA
Sbjct: 121 CTLAPSDPTEDVLHRSSFLLENGFGVYNIFKNNCEDFAIYCKTGLLVSTSVSVGRSGQAA 180

Query: 181 SFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVS 240
           S+LAA S +VS+PLR++TTS SGLALVGV  YC  R +SDIGVRRDV K+PVE L+A   
Sbjct: 181 SYLAAASTLVSTPLRFMTTSFSGLALVGVSFYCVGRLMSDIGVRRDVSKVPVERLIAS-P 240

Query: 241 SSNAPEEATQTAKEE 255
             + PE  T+ AKE+
Sbjct: 241 GLDVPENTTEMAKED 254

[Close]

BLAST of Cla009108 vs. NCBI nr
Match: gi|659126335|ref|XP_008463130.1| (PREDICTED: uncharacterized protein LOC103501354 [Cucumis melo])

HSP 1 Score: 491.1 bits (1263), Expect = 1.2e-135
Identity = 241/254 (94.88%), Postives = 245/254 (96.46%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MGVLSNKISREEL+PGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF
Sbjct: 1   MGVLSNKISREELKPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60

Query: 61  LVSSSTHSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGTC 120
           LVSSS HSPDNPCPVCGDQS GDGVICSCLDCFLGGGDLYIFEYGVTP FFLAKARGGTC
Sbjct: 61  LVSSSPHSPDNPCPVCGDQSFGDGVICSCLDCFLGGGDLYIFEYGVTPMFFLAKARGGTC 120

Query: 121 TLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAAS 180
           TLASSD SEVVLHRASFLLQNGFGMY+IFKNNCEDFAIYCKTGLLVYTTLS+GRSGQAAS
Sbjct: 121 TLASSDLSEVVLHRASFLLQNGFGMYNIFKNNCEDFAIYCKTGLLVYTTLSVGRSGQAAS 180

Query: 181 FLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVSS 240
           FLAATSAIVSSPLRYLTTSCSGLALVGVG YC SR VSDIGVRRDVVKIPVEELVAR SS
Sbjct: 181 FLAATSAIVSSPLRYLTTSCSGLALVGVGTYCVSRLVSDIGVRRDVVKIPVEELVARASS 240

Query: 241 SNAPEEATQTAKEE 255
           SNAPEEAT TAKE+
Sbjct: 241 SNAPEEATLTAKEQ 254

[Close]

BLAST of Cla009108 vs. NCBI nr
Match: gi|449462363|ref|XP_004148910.1| (PREDICTED: uncharacterized protein LOC101207610 isoform X1 [Cucumis sativus])

HSP 1 Score: 485.0 bits (1247), Expect = 8.3e-134
Identity = 236/254 (92.91%), Postives = 243/254 (95.67%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MGVLSNKISREEL+PGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF
Sbjct: 1   MGVLSNKISREELKPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60

Query: 61  LVSSSTHSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGTC 120
           LVSSS HSPD+PCPVCGDQS GDGVICSCLDCFL GGDLYIFEYGVTP FFLAKARGGTC
Sbjct: 61  LVSSSPHSPDSPCPVCGDQSLGDGVICSCLDCFLAGGDLYIFEYGVTPVFFLAKARGGTC 120

Query: 121 TLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAAS 180
           TLASSDSSEVVLHRASFL QNGFGMY+IFKNNCEDFAIYCKTGLLVYTTLS+GRSGQAAS
Sbjct: 121 TLASSDSSEVVLHRASFLFQNGFGMYNIFKNNCEDFAIYCKTGLLVYTTLSVGRSGQAAS 180

Query: 181 FLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVSS 240
           FLAATSAI+SSPLRYLTTSCSGLALVG+G YC SR VSDIGVRRDVVKIPVEELVAR SS
Sbjct: 181 FLAATSAIISSPLRYLTTSCSGLALVGLGTYCVSRLVSDIGVRRDVVKIPVEELVARASS 240

Query: 241 SNAPEEATQTAKEE 255
           SN PEEA QTAKE+
Sbjct: 241 SNTPEEAPQTAKEK 254

[Close]

BLAST of Cla009108 vs. NCBI nr
Match: gi|778702062|ref|XP_011655130.1| (PREDICTED: uncharacterized protein LOC101207610 isoform X2 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 2.5e-114
Identity = 206/223 (92.38%), Postives = 212/223 (95.07%), Query Frame = 1


Query: 32  GIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSSTHSPDNPCPVCGDQSSGDGVICSCLD 91
           GIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSS HSPD+PCPVCGDQS GDGVICSCLD
Sbjct: 2   GIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSSPHSPDSPCPVCGDQSLGDGVICSCLD 61

Query: 92  CFLGGGDLYIFEYGVTPAFFLAKARGGTCTLASSDSSEVVLHRASFLLQNGFGMYHIFKN 151
           CFL GGDLYIFEYGVTP FFLAKARGGTCTLASSDSSEVVLHRASFL QNGFGMY+IFKN
Sbjct: 62  CFLAGGDLYIFEYGVTPVFFLAKARGGTCTLASSDSSEVVLHRASFLFQNGFGMYNIFKN 121

Query: 152 NCEDFAIYCKTGLLVYTTLSIGRSGQAASFLAATSAIVSSPLRYLTTSCSGLALVGVGMY 211
           NCEDFAIYCKTGLLVYTTLS+GRSGQAASFLAATSAI+SSPLRYLTTSCSGLALVG+G Y
Sbjct: 122 NCEDFAIYCKTGLLVYTTLSVGRSGQAASFLAATSAIISSPLRYLTTSCSGLALVGLGTY 181

Query: 212 CASRFVSDIGVRRDVVKIPVEELVARVSSSNAPEEATQTAKEE 255
           C SR VSDIGVRRDVVKIPVEELVAR SSSN PEEA QTAKE+
Sbjct: 182 CVSRLVSDIGVRRDVVKIPVEELVARASSSNTPEEAPQTAKEK 224

[Close]

BLAST of Cla009108 vs. NCBI nr
Match: gi|645243202|ref|XP_008227870.1| (PREDICTED: uncharacterized protein LOC103327339 [Prunus mume])

HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-106
Identity = 189/255 (74.12%), Postives = 218/255 (85.49%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MGVLSNKI R++LRPGDHIYSWR+AY+YAHHGI++G+GKVIHFTRG G EIG+GTVLDR 
Sbjct: 1   MGVLSNKIQRDQLRPGDHIYSWRRAYLYAHHGIYVGEGKVIHFTRGAGQEIGTGTVLDRI 60

Query: 61  LVSSS-THSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGT 120
           + SSS +HSPDNPCP CGDQSS DGV+ SC+DCFL GGDLY+FEYGV  AFF+AKARGGT
Sbjct: 61  IFSSSPSHSPDNPCPKCGDQSSLDGVMSSCIDCFLSGGDLYLFEYGVNAAFFIAKARGGT 120

Query: 121 CTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAA 180
           CTLA+SD  + VLHRA +LLQNGFG Y IFKNNCEDFAIYCKTGLLVYT++S+GRSGQAA
Sbjct: 121 CTLAASDPRQDVLHRAFYLLQNGFGSYDIFKNNCEDFAIYCKTGLLVYTSISVGRSGQAA 180

Query: 181 SFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVS 240
           SFLAA SA++SSPLR+LTTS +GL  VG GMYC SR VSDIG+RRDV+KIPVE L A + 
Sbjct: 181 SFLAAASAVISSPLRFLTTSFTGLGAVGCGMYCVSRLVSDIGIRRDVIKIPVERLTAPLG 240

Query: 241 SSNAPEEATQTAKEE 255
              A E AT+  K +
Sbjct: 241 LDEA-EFATEVVKTD 254

[Close]

BLAST of Cla009108 vs. NCBI nr
Match: gi|1009125432|ref|XP_015879607.1| (PREDICTED: uncharacterized protein LOC107415733 [Ziziphus jujuba])

HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-106
Identity = 193/255 (75.69%), Postives = 217/255 (85.10%), Query Frame = 1


Query: 1   MGVLSNKISREELRPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRF 60
           MG+LSNKI RE+L+PGDHIYSWRQAYIYAHHGI++GDGKVIHFTRG G EIG+GTVLDR 
Sbjct: 1   MGMLSNKIQREQLKPGDHIYSWRQAYIYAHHGIYVGDGKVIHFTRGAGQEIGTGTVLDRI 60

Query: 61  LVSSS-THSPDNPCPVCGDQSSGDGVICSCLDCFLGGGDLYIFEYGVTPAFFLAKARGGT 120
           + SSS +HS DNPCP+CGDQS  DGV+ SC+DCFL GGDLY+FEYGV PA FLAK RGGT
Sbjct: 61  IFSSSPSHSSDNPCPICGDQSRLDGVLSSCIDCFLSGGDLYLFEYGVNPAVFLAKPRGGT 120

Query: 121 CTLASSDSSEVVLHRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSIGRSGQAA 180
           CTLASSD  E VLHRA FLL+NGFG+YHIFKNNCEDFAIYCKTGLLV+T++SIGRSGQA 
Sbjct: 121 CTLASSDPPEDVLHRAFFLLENGFGVYHIFKNNCEDFAIYCKTGLLVFTSISIGRSGQAC 180

Query: 181 SFLAATSAIVSSPLRYLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVS 240
           S LAA SA++SSPLR+LTTS SGLA VG G+YC SR VSDIGVRRDV K+ VE+LV   S
Sbjct: 181 SILAAASAVISSPLRFLTTSFSGLAAVGYGIYCVSRLVSDIGVRRDVSKVAVEKLVD--S 240

Query: 241 SSNAPEEATQTAKEE 255
           S      AT+T KEE
Sbjct: 241 SGLMSLAATETVKEE 253

The following BLAST results are available for this feature:

BLAST of Cla009108 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMS7_CUCSA	5.8e-134	92.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315380 PE=4 SV=1	[more]
M5XB55_PRUPE	1.0e-106	74.12	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010318mg PE=4 SV=1	[more]
W9REN8_9ROSA	8.7e-106	74.02	Uncharacterized protein OS=Morus notabilis GN=L484_007793 PE=4 SV=1	[more]
A9P901_POPTR	1.6e-104	75.20	NC domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s07690g ...	[more]
A0A0B2S5M0_GLYSO	1.6e-104	73.73	Uncharacterized protein OS=Glycine soja GN=glysoja_016899 PE=4 SV=1	[more]

BLAST of Cla009108 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126335\|ref\|XP_008463130.1\|	1.2e-135	94.88	PREDICTED: uncharacterized protein LOC103501354 [Cucumis melo]	[more]
gi\|449462363\|ref\|XP_004148910.1\|	8.3e-134	92.91	PREDICTED: uncharacterized protein LOC101207610 isoform X1 [Cucumis sativus]	[more]
gi\|778702062\|ref\|XP_011655130.1\|	2.5e-114	92.38	PREDICTED: uncharacterized protein LOC101207610 isoform X2 [Cucumis sativus]	[more]
gi\|645243202\|ref\|XP_008227870.1\|	1.1e-106	74.12	PREDICTED: uncharacterized protein LOC103327339 [Prunus mume]	[more]
gi\|1009125432\|ref\|XP_015879607.1\|	1.1e-106	75.69	PREDICTED: uncharacterized protein LOC107415733 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000064	Endopeptidase, NLPC/P60 domain
IPR007053	LRAT-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071284	cellular response to lead ion
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU37211	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU42374	watermelon EST collection version 2.0	transcribed_cluster
WMU53661	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009108	Cla009108.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU42374	WMU42374	transcribed_cluster
WMU53661	WMU53661	transcribed_cluster
WMU37211	WMU37211	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000064	Endopeptidase, NLPC/P60 domain	GENE3D	G3DSA:3.90.1720.10		coord: 6..53 score: 1.
IPR007053	LRAT-like domain	PFAM	PF04970	LRAT	coord: 12..165 score: 5.2
None	No IPR available	PANTHER	PTHR13943	HRAS-LIKE SUPPRESSOR - RELATED	coord: 1..240 score: 6.2E
None	No IPR available	PANTHER	PTHR13943:SF44	SUBFAMILY NOT NAMED	coord: 1..240 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009108	Cla97C01G008650	Watermelon (97103) v2	wmwmbB237
Cla009108	Csa5G315380	Cucumber (Chinese Long) v2	cuwmB412
Cla009108	MELO3C025072	Melon (DHL92) v3.5.1	mewmB032
Cla009108	ClCG01G008320	Watermelon (Charleston Gray)	wcgwmB144
Cla009108	CSPI05G13270	Wild cucumber (PI 183967)	cpiwmB429
Cla009108	Cucsa.173480	Cucumber (Gy14) v1	cgywmB330
Cla009108	CmaCh15G007750	Cucurbita maxima (Rimu)	cmawmB279
Cla009108	CmoCh15G008060	Cucurbita moschata (Rifu)	cmowmB269
Cla009108	Lsi09G008780	Bottle gourd (USVL1VR-Ls)	lsiwmB029
Cla009108	Cp4.1LG13g05550	Cucurbita pepo (Zucchini)	cpewmB185
Cla009108	CsGy5G013350	Cucumber (Gy14) v2	cgybwmB385
Cla009108	MELO3C025072.2	Melon (DHL92) v3.6.1	medwmB031
Cla009108	Carg01428	Silver-seed gourd	carwmB0831
Cla009108	CsaV3_5G020240	Cucumber (Chinese Long) v3	cucwmB437

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla009108	Wax gourd	wgowmB078
Cla009108	Cucurbita maxima (Rimu)	cmawmB711
Cla009108	Cucurbita moschata (Rifu)	cmowmB707
Cla009108	Cucurbita pepo (Zucchini)	cpewmB441
Cla009108	Silver-seed gourd	carwmB0524