MELO3C024753.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024753.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	transmembrane protein 18
Location	chr11 : 7848379 .. 7850475 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGAAAGCTGAGGTTAAATTTAGGCTGAAAGTTGTCGCCAACAATAATTAGTGGAATTTTCCAGAGGGGTTTTAGAGAAAACGCCGTCCTTTCATAGCATCCGAGCTCGAGGTTTTGGGTCGAACAAGAACCGAAGATCAGAATTCGAAATCTATTATTGAATCTTTCGCATCCTTCGATTTCATATCTACTCATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGTAAAATCCCCATTAAAAAACTTTTATCTTCTTTTGTTCCATCCTTTTTCCTGCTCATTTTGAGTATTGTGTTTTATATATATTTTTTGACATTTTGCAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACGTATGATCTTTTCTCCTATTTGCTCTTTTTGCTGAAATTTAATGACATTGTTCAAGGTTTTCCTATTTTGAGTTCTTTGATTGCTGTTCATATTGCATCCTGGCAAAGTAGTGAGTTTTGATCTAGTAATCAAGGTTAGAGATGAATTCTGAGGTGTGAATATCTTTTTGGAAATTATTTGCTGCATCAAGTTTGCAATTATGTAGTTGTGTTTGCATAATGTACAAATTGCATCCTCTGTACTGGGAAAGTAGTGAATTTTGCTCTAGTGGGTATGAATATATACTACCTCTTGAGCTTAGAGATGAACTCTGAGGTTTGAATGTATTTTTGGAGTCACTGCTGCAAGGTTGCAGTAATAAAATCATAGGATTACATTCGCTGCTTAAGTTGTTGATTAATGTTTCTTATGTTTTGTATGCTTTCAGACCATAGAACTGTTTGGTTTAACTTGGCTGCTTTTTGCTGACTATTTTAATTCAATAGATCTATCTCTCTTTCGGTCTCTTCCGGCTTCTTGTTAAAACTGTAAGATGTATGATCAAATGTTGTCAATGTATGATCCAATGTCGTCTATGTCATATATTTCTCAATTATCCTAGAAAGGAATCCCCTTGAGCACCACACAAATTATTGCATGCTTGTATGCTTGACTGTGGACACATTTCAGATTTACATTTTACATGTTGATGCCACTTTTCATGTATTTCAAGGAGAGGACACCCTTTTTTGCATTCCACAAAAAAATTTTCATGCTTGTTCACATTCATGTTTTGCAAGTTCATTCTCAACTTCAACTGTTCTTCATTTCTAGTGATAAGAAATCCATATTTGGAGTACTTACATTTTTGAATTTGTCATGCAGTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGGCAAGTTTTCGCTATTACTTGTTTTTGTCATGTCCCCGATGAGAACCCCCCATGAATTATTTCTCTTTCATTTATCTGTCGTGTAGTTTTTCGAGTTAAGAACACTTAACTGAACCATCATTTCTGTATGACAGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGACCTCATCAGATAAGTTTTTAGCTTTGATTTCTTTTGCTGGTAGCTTGTAGATCTGTATCTTTTCCTTCACAGAGGTCGTTGGAATTATAGGAATACAATGCTAGGAGCAGTTTTGTTCTCTTTTTTTATTTATTGACTAGAATCTACTTAGATATTGTTGCGATCAACTTTATACAACATTCTAGCTTGAATTTCATCAGTGAGTAATATTTTCAGTGATTACTGATTTTATTCACTGAATGTCTTTAATAATTATAGGACTACAATTAATATTTCTTCATCAAGGTTCAACTTTAGTATAGAAGGAAAAT

mRNA sequence

GAATGAAAGCTGAGGTTAAATTTAGGCTGAAAGTTGTCGCCAACAATAATTAGTGGAATTTTCCAGAGGGGTTTTAGAGAAAACGCCGTCCTTTCATAGCATCCGAGCTCGAGGTTTTGGGTCGAACAAGAACCGAAGATCAGAATTCGAAATCTATTATTGAATCTTTCGCATCCTTCGATTTCATATCTACTCATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGACCTCATCAGATAAGTTTTTAGCTTTGATTTCTTTTGCTGGTAGCTTGTAGATCTGTATCTTTTCCTTCACAGAGGTCGTTGGAATTATAGGAATACAATGCTAGGAGCAGTTTTGTTCTCTTTTTTTATTTATTGACTAGAATCTACTTAGATATTGTTGCGATCAACTTTATACAACATTCTAGCTTGAATTTCATCAGTGAGTAATATTTTCAGTGATTACTGATTTTATTCACTGAATGTCTTTAATAATTATAGGACTACAATTAATATTTCTTCATCAAGGTTCAACTTTAGTATAGAAGGAAAAT

Coding sequence (CDS)

ATGGATGAGTTGAGATCTGCAATGGAGGAACACATGGACCAAATGTCGGATCTCATTCAGAAACTTTCATCCGAACTCCGATCCGGTCTCCGTCCCGCTCTTGATAATTTCATCGGCTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGGTTTCATGGATTGTTGCTGATAATAACTATCTTTACCAGGAAGCGTACCAACTTCCAGATGTTCTTGTTCCTTTTTGCACTGGCTGGTGTATATTTTGCTGAAGGAATCAATAAAATCTTGAGCAAAAACTGGAAGAAGTTTGCCACCCAAAACTATTTTGATCCAAATGGAGTTTTCCTATCAGCACTCTGGTGTGGGCCACTGCTTGTAATTTCAATGATAATCCTGATAAACACGCTCTTTACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGACATCGCGCAAGACTGTCACAGAGTAAAGAAGATTGA

Protein sequence

MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED

Homology

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BLAST of MELO3C024753.2 vs. NCBI nr
Match: XP_008462809.1 (PREDICTED: transmembrane protein 18 [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 2.8e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
           CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

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BLAST of MELO3C024753.2 vs. NCBI nr
Match: XP_011650049.1 (PREDICTED: transmembrane protein 18 [Cucumis sativus] >KGN63345.1 hypothetical protein Csa_2G431140 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 2.0e-81
Identity = 157/163 (96.32%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFL ALAGVYFAE IN ILSKNWK FATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

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BLAST of MELO3C024753.2 vs. NCBI nr
Match: XP_022949841.1 (transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane protein 18 [Cucurbita maxima])

HSP 1 Score: 303.5 bits (776), Expect = 4.3e-79
Identity = 150/163 (92.02%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRK TNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRNRARLSQTKED 163

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BLAST of MELO3C024753.2 vs. NCBI nr
Match: XP_023543279.1 (transmembrane protein 18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-78
Identity = 149/163 (91.41%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWL+GLLGFHGL
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLIGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRK TNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLL+ISMIILINTLFTLCYLVVRWKRAELR+RARLSQSKED
Sbjct: 121 SGPLLLISMIILINTLFTLCYLVVRWKRAELRNRARLSQSKED 163

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BLAST of MELO3C024753.2 vs. NCBI nr
Match: XP_022156188.1 (transmembrane protein 18 [Momordica charantia])

HSP 1 Score: 294.7 bits (753), Expect = 2.0e-76
Identity = 147/163 (90.18%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHMDQM+DLI KLSSELRSGLRPA+DNFIGFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITI TRKRTNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTL TLC+LVVRWKRAEL+HRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163

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BLAST of MELO3C024753.2 vs. TAIR10
Match: AT1G34350.2 (unknown protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-62
Identity = 114/188 (60.64%), Postives = 143/188 (76.06%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+E+RSAME+ +D ++DL++KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH L
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFA-------------------------LAGVYFAEGINKI 120
           LL++T+ +R+  NF MFLFL A                         +AGVYFAE +N+ 
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLACKFPLKLSIYILYKKSLRSNDLTSLVAGVYFAENLNRE 120

Query: 121 LSKNWKKFATQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRA 164
           L KNWK F+TQNYFD NGVFLS LW GPLLVI+MIILINTLF+LCYL+V+WKRAELRHRA
Sbjct: 121 LRKNWKSFSTQNYFDSNGVFLSTLWSGPLLVIAMIILINTLFSLCYLIVKWKRAELRHRA 180

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BLAST of MELO3C024753.2 vs. Swiss-Prot
Match: sp|Q5F410|TMM18_CHICK (Transmembrane protein 18 OS=Gallus gallus OX=9031 GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.0e-16
Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GL GFH L  ++T F+ +    Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 26  DWAEPWLLGLAGFHVLCFLLTCFSFQHYRVQIGHFLCMVCLVYCAEYINELAAMNWRLFS 85

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSK 162
              YFD  G+F+S ++  PLLV ++II++N ++    ++   K  + R +A   + K
Sbjct: 86  KYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVYRTLNVMTELKTLQQRIKAEKDKKK 142

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BLAST of MELO3C024753.2 vs. Swiss-Prot
Match: sp|Q6DGF8|TMM18_RAT (Transmembrane protein 18 OS=Rattus norvegicus OX=10116 GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.0e-16
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ FA
Sbjct: 22  DWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFA 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILI 134
              YFD  G+F+S ++  PLL  +M+I+I
Sbjct: 82  KYQYFDSRGMFISLVFSAPLLFNAMVIVI 110

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BLAST of MELO3C024753.2 vs. Swiss-Prot
Match: sp|Q3SZ36|TMM18_BOVIN (Transmembrane protein 18 OS=Bos taurus OX=9913 GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GL GFH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 22  DWTEPWLVGLAGFHVLCLLLTCFSSQRYRLQVGHFLCLVTLVYCAEYINEVAAMNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRAR 157
              YFD  G+F+S ++  PLL+ +++I++  L+    LVV      LR + R
Sbjct: 82  KHQYFDSRGMFISLVFSAPLLLNALVIVV--LWVRKTLVVMTDLRSLREQRR 131

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BLAST of MELO3C024753.2 vs. Swiss-Prot
Match: sp|Q3TUD9|TMM18_MOUSE (Transmembrane protein 18 OS=Mus musculus OX=10090 GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE IN++ + NW+ F+
Sbjct: 22  DWTEPWLLGLLAFHLLCLLLTCFSSQRYKLQIGHFLCLVVLVYSAEYINEVAAVNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILI 134
              YFD  G+F+S ++  PLL  +M+I+I
Sbjct: 82  KYQYFDSRGMFISLVFSAPLLFNAMLIVI 110

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BLAST of MELO3C024753.2 vs. Swiss-Prot
Match: sp|Q96B42|TMM18_HUMAN (Transmembrane protein 18 OS=Homo sapiens OX=9606 GN=TMEM18 PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 6.6e-15
Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 45  DWKEPWLMGLLGFHGLLLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFA 104
           DW EPWLMGL  FH L +++T  + +    Q+  FL  +  VY AE IN+  + NW+ F+
Sbjct: 22  DWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFS 81

Query: 105 TQNYFDPNGVFLSALWCGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
              YFD  G+F+S ++  PLLV +MII++  ++    ++   K A+ R        KED
Sbjct: 82  KYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERXXXXXXXXKED 140

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BLAST of MELO3C024753.2 vs. TrEMBL
Match: tr|A0A1S3CHQ8|A0A1S3CHQ8_CUCME (transmembrane protein 18 OS=Cucumis melo OX=3656 GN=LOC103501090 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
           CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MELO3C024753.2 vs. TrEMBL
Match: tr|A0A0A0LN62|A0A0A0LN62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.4e-81
Identity = 157/163 (96.32%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           MDELRS MEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIFTRKRTNFQMFLFL ALAGVYFAE IN ILSKNWK FATQNYFDPNGVFLSALW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MELO3C024753.2 vs. TrEMBL
Match: tr|C6T4J9|C6T4J9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527513 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 123/163 (75.46%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+EL+SAMEEHMD M+DL+QKLSS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELKSAMEEHMDLMADLVQKLSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVYFAE +N+ L KNWK F++QNYFDP G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYFAESLNRFLGKNWKSFSSQNYFDPRGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753.2 vs. TrEMBL
Match: tr|A0A0B2RE88|A0A0B2RE88_GLYSO (Transmembrane protein 18 OS=Glycine soja OX=3848 GN=glysoja_024155 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 123/163 (75.46%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+EL+SAMEEHMD M+DL+QKLSS+LR+G RPA DNFIGFFHAIDWKEPWLMGLLGFH +
Sbjct: 1   MEELKSAMEEHMDLMADLVQKLSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LL++ I +RK+TNFQMFLFL  LAGVYFAE +N+ L KNWK F++QNYFDP G+F+S LW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYFAESLNRFLGKNWKSFSSQNYFDPRGLFMSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLLVISMIILINTLF+LCY++VRWKRAELRHRAR +++K+D
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163

[Close]

BLAST of MELO3C024753.2 vs. TrEMBL
Match: tr|A0A1R3HZC0|A0A1R3HZC0_COCAP (Transmembrane protein 18 OS=Corchorus capsularis OX=210143 GN=CCACVL1_16108 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-67
Identity = 127/163 (77.91%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60
           M+ELRSAMEEHM+ M+DL+QKLSSELRSGLRPA DNFIGFFHAIDWKEPWL+ LL FH +
Sbjct: 1   MEELRSAMEEHMEVMADLVQKLSSELRSGLRPAYDNFIGFFHAIDWKEPWLICLLAFHTV 60

Query: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120
           LLIITIF+RK TNFQM LFL ALAGVY AE +NK L  NWK+FATQNYFDP+G+FLS LW
Sbjct: 61  LLIITIFSRKNTNFQMCLFLLALAGVYLAETVNKFLGDNWKRFATQNYFDPSGLFLSVLW 120

Query: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 164
            GPLL I++IILINTLF++CYL+VRWKRAELRHRARL+++K+D
Sbjct: 121 SGPLLAIAIIILINTLFSMCYLIVRWKRAELRHRARLARNKQD 163

The following BLAST results are available for this feature:

BLAST of MELO3C024753.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462809.1	2.8e-86	100.00	PREDICTED: transmembrane protein 18 [Cucumis melo]	[more]
XP_011650049.1	2.0e-81	96.32	PREDICTED: transmembrane protein 18 [Cucumis sativus] >KGN63345.1 hypothetical p...	[more]
XP_022949841.1	4.3e-79	92.02	transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane prot...	[more]
XP_023543279.1	1.2e-78	91.41	transmembrane protein 18 [Cucurbita pepo subsp. pepo]	[more]
XP_022156188.1	2.0e-76	90.18	transmembrane protein 18 [Momordica charantia]	[more]

BLAST of MELO3C024753.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34350.2	1.2e-62	60.64	unknown protein	[more]

BLAST of MELO3C024753.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5F410\|TMM18_CHICK	6.0e-16	36.75	Transmembrane protein 18 OS=Gallus gallus OX=9031 GN=TMEM18 PE=2 SV=1	[more]
sp\|Q6DGF8\|TMM18_RAT	6.0e-16	46.07	Transmembrane protein 18 OS=Rattus norvegicus OX=10116 GN=Tmem18 PE=2 SV=1	[more]
sp\|Q3SZ36\|TMM18_BOVIN	2.3e-15	40.18	Transmembrane protein 18 OS=Bos taurus OX=9913 GN=TMEM18 PE=2 SV=1	[more]
sp\|Q3TUD9\|TMM18_MOUSE	2.3e-15	44.94	Transmembrane protein 18 OS=Mus musculus OX=10090 GN=Tmem18 PE=2 SV=1	[more]
sp\|Q96B42\|TMM18_HUMAN	6.6e-15	36.97	Transmembrane protein 18 OS=Homo sapiens OX=9606 GN=TMEM18 PE=1 SV=2	[more]

BLAST of MELO3C024753.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CHQ8\|A0A1S3CHQ8_CUCME	1.8e-86	100.00	transmembrane protein 18 OS=Cucumis melo OX=3656 GN=LOC103501090 PE=4 SV=1	[more]
tr\|A0A0A0LN62\|A0A0A0LN62_CUCSA	1.4e-81	96.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=4 SV=1	[more]
tr\|C6T4J9\|C6T4J9_SOYBN	2.9e-68	75.46	Uncharacterized protein OS=Glycine max OX=3847 GN=100527513 PE=2 SV=1	[more]
tr\|A0A0B2RE88\|A0A0B2RE88_GLYSO	2.9e-68	75.46	Transmembrane protein 18 OS=Glycine soja OX=3848 GN=glysoja_024155 PE=4 SV=1	[more]
tr\|A0A1R3HZC0\|A0A1R3HZC0_COCAP	1.1e-67	77.91	Transmembrane protein 18 OS=Corchorus capsularis OX=210143 GN=CCACVL1_16108 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026721	TMEM18

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024753.2.1	MELO3C024753.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..25
None	No IPR available	PANTHER	PTHR22593:SF9	SUBFAMILY NOT NAMED	coord: 1..163
None	No IPR available	PANTHER	PTHR22593	FAMILY NOT NAMED	coord: 1..163
IPR026721	Transmembrane protein 18	PFAM	PF14770	TMEM18	coord: 38..156 e-value: 4.9E-48 score: 161.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024753.2	Csa2G431140	Cucumber (Chinese Long) v2	cumedB088
MELO3C024753.2	CSPI02G27300	Wild cucumber (PI 183967)	cpimedB088
MELO3C024753.2	Cucsa.017300	Cucumber (Gy14) v1	cgymedB435
MELO3C024753.2	Lsi10G002100	Bottle gourd (USVL1VR-Ls)	lsimedB054
MELO3C024753.2	CsGy2G026750	Cucumber (Gy14) v2	cgybmedB080
MELO3C024753.2	Cla006790	Watermelon (97103) v1	medwmB120
MELO3C024753.2	ClCG02G007860	Watermelon (Charleston Gray)	medwcgB088
MELO3C024753.2	Cla97C02G034530	Watermelon (97103) v2	medwmbB087
MELO3C024753.2	Bhi10G001224	Wax gourd	medwgoB128
MELO3C024753.2	CsaV3_2G035870	Cucumber (Chinese Long) v3	cucmedB096

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024753.2	Cucurbita maxima (Rimu)	cmamedB573
MELO3C024753.2	Cucurbita maxima (Rimu)	cmamedB616
MELO3C024753.2	Cucurbita moschata (Rifu)	cmomedB561
MELO3C024753.2	Cucurbita moschata (Rifu)	cmomedB605
MELO3C024753.2	Cucurbita pepo (Zucchini)	cpemedB306
MELO3C024753.2	Cucurbita pepo (Zucchini)	cpemedB806
MELO3C024753.2	Silver-seed gourd	carmedB0941
MELO3C024753.2	Silver-seed gourd	carmedB1034
MELO3C024753.2	Wax gourd	medwgoB139