MELO3C024627.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024627.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDynein light chain family protein
Locationchr02 : 20106252 .. 20112507 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAGGAGTCACTGTAGAAATAGAGAAAGACAAGAGAGTTTTTGTTTGCTTTGCTTTACCCTTTTCGCCTATATAATTATAATATATAATTCCATCTCTGTTTCCATTCCGATTTGGCAGCCACCACAGATTTTCCATTCCCTGTTTTAGTTTCTCCACTTATATAATTAATAATAATAATAATAATCATCATCATCATCATCATCATCATCTTGAATCCGATCGAGAAGAAAGATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTTCCTCTCCCTTGCTTCCTATATCAAGAAGGTACGTTACGTTGGTTGTTACAATTACAATTCATTTTAATTTTTCATCAATATTTTTCAATTCAAATTAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCACTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAATTCATATCTTTAGGGCTGCTCTCCTCTCTTTCGCCCCCCCTCTCTATCCCTAAAATTTACATGGAACGACGAGCAACAACAAACCCACCGTACGTTGCGTATGTATTATTATTGTCACATGTGATCCGTCTTTTAATTTCTCCTTCTGCTATGTATGTTTTTTAATAATTCATTTTTCTCTTTTACTTTCTTCATTTTTCATCATATGAACACATCTATATTATCTTTTATTCTTATTATTATTGCAATTCATATGAGGTTTCCAAAACTAGTTTTTGCCTTTTCTTCTCAAATGTATCATTTTAGAAAGTTTATTCTAGAGTTTGACAACGTCCAACAATGAAGTTGGACTTGGAATATTTCTAAATAAATATATAATAATTACTAATTTGAACTTGGAATACCCTTCATAACAATGTCCTCTCCAATTTAGATTCATACTCGTACCCTTTTGATTTACACAAAAGAAAAAAAATGGTGAATATGTGATGTAATAGCAATTATAATTATTAACTCAATTTCATTCAAATTTGTTTTTAAAAAGTATTTGGACAAAATAAACTATTTATACATATGGAAATAAAAACTTATTACATTTTTAGGTTTGATCCTTTTATGAAAGGTAAATATTTGGTTATTTTTTAGAATCTTTAATTAGTAATACAAATAGGATTTTACTTATATTTCTTATTATAATAAATTTAAGAAAAAAGCCTACGGGTCCCCTCCCCGTCCCCATTTAATTCTCGAAGAATTTTTTTGCTTCCCCTTCTCTCATCTCCTGCCTAGATGTCTCTACCTTGATCTCCATCCCAACTGGGAAAGTAACATCCCTACAAATAAACCAACTTATATTTGTTTTAAAAATAAATAATCACAACAAAATCATGAATGTTCAAAAATATAAGTAATATATCGTAAATGAAAAAATTTATAAAATATAACCAAATTTCAGATTTTATCAATATAGATATTAGTGGATAATAGACTTCTATCAGTTTCTATTAATAACATCAATAAATATTAATATAAGTCTATTGGTATGTGTCTCATTGATATGATCTAAAAATTTTCTACATTTTATAATTTTTTTGAATCGTTTGTTTATATTTATAAATTATGAAAAGACGTGTAAATCAATTTTAACGAGATTAGTTTACTTAGAAAACTAAAGAAGCAAAGAAGACCTTCAAGTTAAACATCAAAGTAAAAGGTAATAATTTTAGTTAAAGAAAAAGTAAGTAAAGATTGTAATTTTTTTTTTAAAAGGTAAATATAATAATAAATGAGCATAACAAAGAAAATAGTTCAAAGAAATATGAAGAAGAAAAGAATCTTAGTTAAAGGTTTCATTATGCATCTTGACTCAACTAATTTTCGAATTTGTCACACTTATGGAATAATTCTATCTTTTCCTTTTAATCTACTCTTTACGTTGAAAATCTATTTTACAATTTACAATTCAAAAAGAAAATTTTATAAATTAACTTATTAACTCTACTCAATTAGCTAAAGGGGTATTCACAAAATAAAATAAAAAAAGCAAAACAAGTTATAATAATTAAGTCCATAATACACAAATTTATTGTTTGCAAAAATAACAAAAACAAAGCCTAGCTCACATATATAATTAAAATGTAAAATATCACAAATATAATGCTCTCATTACTGATATACATTTGAAACACTTGATAATACACCTAATATACCTAATATTTCTTGATACCCTTGACATATATTTGACACTTCTTGATAACCTTTAGACCTTGATACACTTGATGCATCATGAAACTCTTTGATACCCTTAATACTCTTTGATACACTTGGAACACATTGATACACTTAAAGGCTTCATTGATTCTTCTTAATACACTTGATATCCTTTATGTCTCGATACATGTAAAGGCTTCATTGATTAGTTCGATCCACTTCATACATTGCTAATAAACTTGTTATGCTTCATTGGTACACTAAAAAAAATTGATACACTTGATACACGTGGTATATTTGATACATCTGAAGTACTACATATACATGTACTATGATTCACTGATAGAGTTGATATACTTGAAGTTCTACTTATACACTTGATACACTATTGATATACACTTGTAAACTTGATTGATATACTTGATAATGATTCACTTTACTAATATGTTGATATGCTTTAATAATATATTGTTGATATACTTGATAATGTTACACAGAGTTATATCATTCCTATACTTAATAAAAATTGGAAAAATAAAAATTACGTAATAAGTAGATAAACCAACTAATGCATACAATATAAGTATATCACAACATTGATATACAAAACTAATACAAAGTAAAACCAAAATAAAACCAACGTAAAAAAAAAAATAAAACAAATCATATGAAATCAAATTCAACTAAAAATACACATCGAAGAAAGTAGAAAAAAACCACAAACGAAGTTAAATTACTATGATCAACGACCATTATATTTCATATTGCAATTAATATTTTAAAATAAAGATTAAGACAGAGAACAAATTGTTTTTCTCATATAAAAAAGGATGATTAGAGCCTTAAAAAATAGAAGAAGAAGAAATAAGAGAGGATTAAAACATTAAAAAGGAAAAAGAAATAAATTATTGAAAGATAATTGAAAAATAATAATAAATTTAAAATGTAAAATATTTTAAAAAACGAAAATTTTGTCATATTTATAAAATTTTGAAACAATGTATTATATTTACAATATCATATTCTTAAGGTCACTACCGCAATTTCCCAAAGCTAAAGCATCCTATTAACTCTAGATGATGAAGTAGACGATGACTCAAAAGAACAAAGGATAACACTTTTAATTTTTCTTTTTGGAGGGCCACAAGAACAAAGGTCGCCTTCTCTGGCGTGTGGGATGGGAAATAGGGAATCATTGTTATTCTGCATAAACGTCACAAATCGTTGGGTCAGTTTGAGTATGTGAACTTTTTGTATTTTTGCAATCTCAAATCAATCATTTCAATTTGCATTATTGAACCCTTCAATTTTATTTTCCCAAAAAAAATGATCACAAATGCTATCAAACTTCCACACCCTTCATTCGACTAATTTGAAAAGTCTTTCAGTGCTTAACATCTCTTTTTCAACTTCTTTTACAACACTTCTGGGTATTAAAATTGACTATTATAATTCACTAACGAATCTTAAACTTACTACAGTATAATTATTCGAAAATTTTCATTGTCTATTATTTCAACCATTCTCTTATATGTAACTCTAACTGAAATAGTATGTCTCAAATAGAAATTATTATTACAAAGAGTAAAGTAGTTTGTTTCTGAAATAGACTTTTGTCTAGTGATTCCGTTGGCAAAATAAAAGCAGCACCTTTTTTGGCGTGTCACGTCAACTCTTTTCTCAAATATGCATTGGAATAAAGATTTTAGGTGTAGTAATTGAAAGTTTTTTTTCCTCTGGTATATACAATACAGAAGATACAATTTTCTGATGTTATGTAAAGGACTCTTCAATTAGTCCACTCAAAATCATCATTTCTATATCATTTACCACTTCCTCACTTTCACTTCTTGAAAATCCATTCTTCCAACCAATATCCCACATTCCATTCATCACTTCTTTGCACCAAAGGTCTCTACTCAACACTGCATATAGAGTATCTACAATAAGATTATCGCCACAAATTGTTTGGTAACTTGTTAGAGTGTCGATGTCGTCGTTCACTTCTTCAACAAGTTTTTCTATAGAAATCTCTATCTTTGTATTGCTCTTATCTCCTAGTAATAAAGAATTGCCTACTAGTAAGTTATGATGGCCTTTACGGTCCATGAGTTCTATTGCACAATCTACAAAAAGTTTCGTATTCAGGGATTCGGGATCATTGCAGCGAGATGCTGCCTGCAGCATTGTTCTACCATTTAGATGGAGATCATAAAGCTCCCCTGCATGACAGAGGAATGATGAACTTTTCAAAAGTAATGCTTTCAGATTGGTCCCTTGATTGCAGCTTTTGGTATGTGCTTCAGTATGACCATTGCGATCAATTTCTTCAACAGTACTTGTATTGATATCGAGTTTGGGGCTCAATGGCAAGAGAGAGTTAGGGTTCTCATTGCAGCATTCTACAAGATTTATGAGAGAACCAAGTATAAATCACAAACATTTAGACAATTCCAAGTACTTGTTCTACTTAGGAAGGCAAAGTTATTGAATTTCACTAAAAATCTCTCTTGGATGAAGATATATGAGATTCAAGTATGGGGATAGAGAATGAACGTTTCCCTTTCCCTTTAAGATGAATTGTGGTCAATAACAGTAGACATTGCAACTAATCCTATTTGTGATGGAAAATTTACCTATAATCTTTGTATCACATTCGTCCATTTCGTTCTCCATAGTAATTAAAGCCATAAGGGTAGTAGTGTTTCGATTTATCTGAAAATCAACAATTTCATTCGTAAGACAAACCATGTGAGCCTGTAAGATAAACACTGCTTCACTCTCCTTTTACAAGGGAAGAAAAAGTATACTGAAGCATAAAAGAAAAATAGTTTGATGTACCAAAAGTTAAAGGATAGGTCAGAACTCACAAATGAATTAACTTCTGAATGGGAAAGGACTGGTTCATCCTTTTTCTGACAGTCGCGATTGTTAGATATTGCTCTCACTGCTCGTTCTGGCACAGGATCTTGAATGGAGCTACGTTGTTTATGAGTTCTGTTCTTCCTTGGATTAGTGGATGTCACTTTTTCTTGATGCTGTGGTCTTGACACAACTTTTTCTTTTGAAAATTCTTTTTCCACTGGTTTAGTCAGTTTCTTTGAAGAAAGAACTTTCCTGTCAATTGGTTCTTTCTCATGGGGCATATCAGGCATTGGACTAAATATTTTCAACTTCTCTGCAGTCTTTTTCTTAGTATCAACAGTACATTCTTTTAATTTTTTTGCTTCTTTTTTTGGTTTCAGCTTTCTTCCTTCCTCAGCAATCTGTTTGACTGGACTCCCTTGCCCCTTTTGTTTCCTGTGCAATTTATCTGAACTCATAATTCCACCATGGAAATCAAAATCTCCAGCCGACTGAAGTTCTTTCTTTTTCGTACTTCTTAGCTTAGTTTTTTGGTCAAAAGCATCATTTTTTGAGGAGACATGTGCTCGGTGTTCCTCAAATTCGTCAGGTGGGAGAGGCTTGTGTTTTATCAATACAATTGGCCGTCCATCTTTCAACCTTTGTTTGGAACCATCATTGTAGGAATTTGAGCAATGAATGTTAAACTCTATATCAGAATCACTCTCTCTAAGCTTGTTGACAGGCATTTTTTCAAGTATTTCTCTCAAGGTTCCTTTTTGATGATCCTCCTTGTTGATGACAGATTTAGACTTGGGCATATTCAAAGTTGCATTGATGCCAAAGAGAGATGTCTTGTAACCAGAGACTTTTTTAAATTCGAACTCTTTCTTTGGAGTAATTTGCATTGATCTTGATGGAATTTCTTCAAGCCCCATAAGCTTAGCTATCAAGTTATTACGTTTCAAATTCTTCTGTTGAGATGTTGTACCGTGACAACAGTTGACATTATCATCAATCAATGAAGATTGGCTGGAGCAAGTCAATGAGATTTCCGACCCCGAGTTGGAATTTATATCACGAAAACAAGATTTACGTTCACCAACTGTAACATTACG

mRNA sequence

TTGGAGGAGTCACTGTAGAAATAGAGAAAGACAAGAGAGTTTTTGTTTGCTTTGCTTTACCCTTTTCGCCTATATAATTATAATATATAATTCCATCTCTGTTTCCATTCCGATTTGGCAGCCACCACAGATTTTCCATTCCCTGTTTTAGTTTCTCCACTTATATAATTAATAATAATAATAATAATCATCATCATCATCATCATCATCATCTTGAATCCGATCGAGAAGAAAGATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTTCCTCTCCCTTGCTTCCTATATCAAGAAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCACTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAATTCATATCTTTAGGGCTGCTCTCCTCTCTTTCGCCCCCCCTCTCTATCCCTAAAATTTACATGGAACGACGAGCAACAACAAACCCACCCTTTCTTCCTTCCTCAGCAATCTGTTTGACTGGACTCCCTTGCCCCTTTTGTTTCCTGTGCAATTTATCTGAACTCATAATTCCACCATGGAAATCAAAATCTCCAGCCGACTGAAGTTCTTTCTTTTTCGTACTTCTTAGCTTAGTTTTTTGGTCAAAAGCATCATTTTTTGAGGAGACATGTGCTCGGTGTTCCTCAAATTCGTCAGGTGGGAGAGGCTTGTGTTTTATCAATACAATTGGCCGTCCATCTTTCAACCTTTGTTTGGAACCATCATTGTAGGAATTTGAGCAATGAATGTTAAACTCTATATCAGAATCACTCTCTCTAAGCTTGTTGACAGGCATTTTTTCAAGTATTTCTCTCAAGGTTCCTTTTTGATGATCCTCCTTGTTGATGACAGATTTAGACTTGGGCATATTCAAAGTTGCATTGATGCCAAAGAGAGATGTCTTGTAACCAGAGACTTTTTTAAATTCGAACTCTTTCTTTGGAGTAATTTGCATTGATCTTGATGGAATTTCTTCAAGCCCCATAAGCTTAGCTATCAAGTTATTACGTTTCAAATTCTTCTGTTGAGATGTTGTACCGTGACAACAGTTGACATTATCATCAATCAATGAAGATTGGCTGGAGCAAGTCAATGAGATTTCCGACCCCGAGTTGGAATTTATATCACGAAAACAAGATTTACGTTCACCAACTGTAACATTACG

Coding sequence (CDS)

ATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTTCCTCTCCCTTGCTTCCTATATCAAGAAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCACTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAA

Protein sequence

MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Homology
[Close]
BLAST of MELO3C024627.2 vs. NCBI nr
Match: XP_008462685.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 7.3e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]
BLAST of MELO3C024627.2 vs. NCBI nr
Match: XP_004150050.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQMHAMASAS ALDLFDVSD LSLAS+IKKDFDGTYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASQALDLFDVSDSLSLASHIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]
BLAST of MELO3C024627.2 vs. NCBI nr
Match: XP_022933771.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dynein light chain 1, cytoplasmic-like [Cucurbita maxima] >XP_023529424.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36
Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFKAAS 92

[Close]
BLAST of MELO3C024627.2 vs. NCBI nr
Match: XP_022144999.1 (dynein light chain 1, cytoplasmic-like [Momordica charantia])

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGK  VKETDMSEKMQ+HAMASASHALDLFDVSD LSLA++IKK+FD TYG GWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSP 92
          GSNFG FFTHS  TFIYF+LETLNFLIFK P
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPP 91

[Close]
BLAST of MELO3C024627.2 vs. NCBI nr
Match: XP_007160331.1 (hypothetical protein PHAVU_002G312600g [Phaseolus vulgaris] >ESW32325.1 hypothetical protein PHAVU_002G312600g [Phaseolus vulgaris])

HSP 1 Score: 152.9 bits (385), Expect = 5.3e-34
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA VKETDMS KMQ+HAMASASHALDL+DVSD  S+A++IKK+FD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMASASHALDLYDVSDCTSVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGC+FTHS GTFIYF+LETLNFLIFK  S
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGTS 92

[Close]
BLAST of MELO3C024627.2 vs. TAIR10
Match: AT3G16120.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 134.4 bits (337), Expect = 3.5e-32
Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA V+ETDM  KMQM AM  AS +LDLFDV D +S+A++IKK+FD  YGSGWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFK 90
          G+NFGCFFTHS GTFIYF L TLNFLIFK
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]
BLAST of MELO3C024627.2 vs. TAIR10
Match: AT4G27360.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 100.1 bits (248), Expect = 7.3e-22
Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA + +TDM + M+  A++ AS ALD FDV++   +A +IKK+FD +YGSGWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFK 90
          G++FG F TH  G FI+FS+ +L  L+FK
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFK 89

[Close]
BLAST of MELO3C024627.2 vs. TAIR10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-16
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCV 60
          MLEGKA V+++DM  KMQM AMA AS ALDLFDV D  S+A +IKK+FD  YGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]
BLAST of MELO3C024627.2 vs. TAIR10
Match: AT5G20110.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 71.6 bits (174), Expect = 2.8e-13
Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 0 

Query: 12  DMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHS 71
           DM   MQ HA   A   LD  +      +A  +KK+FD  YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  MGTFIYFSLETLNFLIFKS 91
            G FIYFS++ L  L+FK+
Sbjct: 183 TGCFIYFSMDKLYVLLFKT 201

[Close]
BLAST of MELO3C024627.2 vs. TAIR10
Match: AT4G15930.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0 

Query: 5   KATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNF 64
           +A +K  DM + MQ  A+  A  A + + V     +A  IKK+FD  +G+ W C+VG NF
Sbjct: 39  RAVIKSADMKDDMQKEAIEIAISAFEKYSVEK--DIAENIKKEFDKKHGATWHCIVGRNF 98

Query: 65  GCFFTHSMGTFIYFSLETLNFLIFKS 91
           G + TH    F+YF L+    L+FKS
Sbjct: 99  GSYVTHETNHFVYFYLDQKAVLLFKS 122

[Close]
BLAST of MELO3C024627.2 vs. Swiss-Prot
Match: sp|Q24117|DYL1_DROME (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M + KA +K  DMSE+MQ  A+  A+ AL+ +++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G NFG + TH    FIYF L  +  L+FKS
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFKS 88

[Close]
BLAST of MELO3C024627.2 vs. Swiss-Prot
Match: sp|Q94748|DYL2_SCHMA (Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13
Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M E KA +K  DM E MQ  A+ +A+ ALD +++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MGERKAVIKNADMHEDMQETAVHTAAAALDKYEIEK--DVAAYIKKEFDRKYNPNWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G +FG + TH    FIYF L+   FL+FKS
Sbjct: 61 GKHFGSYVTHETQHFIYFYLQERAFLLFKS 88

[Close]
BLAST of MELO3C024627.2 vs. Swiss-Prot
Match: sp|Q9UR05|DYL1_SCHPO (Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dlc2 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 6  ATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFG 65
          A +K  DMSEKMQ  A+ +A  A++ F +     +A++IK++FD  +   W C+VG NFG
Sbjct: 2  AVIKAVDMSEKMQQEAIHAAVQAMEKFTIEK--DIAAFIKREFDKKFSPTWHCIVGRNFG 61

Query: 66 CFFTHSMGTFIYFSLETLNFLIFKS 91
           F TH    FIYF L T+ FL+FKS
Sbjct: 62 SFVTHESRHFIYFYLGTVAFLLFKS 84

[Close]
BLAST of MELO3C024627.2 vs. Swiss-Prot
Match: sp|Q22799|DYL1_CAEEL (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-13
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M++ KA +K  DMS+ MQ  A+  A+ AL+ +++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G NFG + TH    FIYF L  +  L+FKS
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]
BLAST of MELO3C024627.2 vs. Swiss-Prot
Match: sp|O02414|DYL1_HELCR (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-13
Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          M E KA +K  DM E MQ  A+  A+ AL+ F++     +A+YIKK+FD  Y   W C+V
Sbjct: 1  MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEK--DIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKS 91
          G NFG + TH    FIYF L  +  L+FKS
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAVLLFKS 88

[Close]
BLAST of MELO3C024627.2 vs. TrEMBL
Match: tr|A0A1S3CJ38|A0A1S3CJ38_CUCME (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.8e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 92

[Close]
BLAST of MELO3C024627.2 vs. TrEMBL
Match: tr|A0A1S3UQ79|A0A1S3UQ79_VIGRR (Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-34
Identity = 73/92 (79.35%), Postives = 84/92 (91.30%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A++IKK+FD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGC+FTHS GTFIYF+LETLNFLIFK  S
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGSS 92

[Close]
BLAST of MELO3C024627.2 vs. TrEMBL
Match: tr|A0A0L9VRV1|A0A0L9VRV1_PHAAN (Dynein light chain OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g083300 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-34
Identity = 73/92 (79.35%), Postives = 84/92 (91.30%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A++IKK+FD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGC+FTHS GTFIYF+LETLNFLIFK  S
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGTS 92

[Close]
BLAST of MELO3C024627.2 vs. TrEMBL
Match: tr|A0A0S3QWU7|A0A0S3QWU7_PHAAN (Dynein light chain OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G026900 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-34
Identity = 73/92 (79.35%), Postives = 84/92 (91.30%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A++IKK+FD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGC+FTHS GTFIYF+LETLNFLIFK  S
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGTS 92

[Close]
BLAST of MELO3C024627.2 vs. TrEMBL
Match: tr|V7CSS4|V7CSS4_PHAVU (Dynein light chain OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G312600g PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-34
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0 

Query: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60
          MLEGKA VKETDMS KMQ+HAMASASHALDL+DVSD  S+A++IKK+FD  YG+GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMASASHALDLYDVSDCTSVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS 93
          GSNFGC+FTHS GTFIYF+LETLNFLIFK  S
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFKGTS 92

The following BLAST results are available for this feature:
BLAST of MELO3C024627.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462685.17.3e-44100.00PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo][more]
XP_004150050.12.0e-4196.74PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus][more]
XP_022933771.11.1e-3686.96dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dyne... [more]
XP_022144999.11.4e-3484.62dynein light chain 1, cytoplasmic-like [Momordica charantia][more]
XP_007160331.15.3e-3480.43hypothetical protein PHAVU_002G312600g [Phaseolus vulgaris] >ESW32325.1 hypothet... [more]
BLAST of MELO3C024627.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16120.13.5e-3275.28Dynein light chain type 1 family protein[more]
AT4G27360.17.3e-2253.93Dynein light chain type 1 family protein[more]
AT1G52240.13.5e-1669.49RHO guanyl-nucleotide exchange factor 11[more]
AT5G20110.12.8e-1346.84Dynein light chain type 1 family protein[more]
AT4G15930.11.2e-1139.53Dynein light chain type 1 family protein[more]
BLAST of MELO3C024627.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q24117|DYL1_DROME1.2e-1344.44Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1... [more]
sp|Q94748|DYL2_SCHMA1.2e-1345.56Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1[more]
sp|Q9UR05|DYL1_SCHPO1.6e-1345.88Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
sp|Q22799|DYL1_CAEEL2.0e-1343.33Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=... [more]
sp|O02414|DYL1_HELCR2.0e-1345.56Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431... [more]
BLAST of MELO3C024627.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CJ38|A0A1S3CJ38_CUCME4.8e-44100.00Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500988 PE=3 SV=1[more]
tr|A0A1S3UQ79|A0A1S3UQ79_VIGRR3.5e-3479.35Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV... [more]
tr|A0A0L9VRV1|A0A0L9VRV1_PHAAN3.5e-3479.35Dynein light chain OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g083300 PE=3 SV... [more]
tr|A0A0S3QWU7|A0A0S3QWU7_PHAAN3.5e-3479.35Dynein light chain OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G02690... [more]
tr|V7CSS4|V7CSS4_PHAVU3.5e-3480.43Dynein light chain OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G312600g PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0030286dynein complex
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
biological_process GO:0060271 cilium morphogenesis
biological_process GO:2000582 positive regulation of ATP-dependent microtubule motor activity, plus-end-directed
biological_process GO:0010970 transport along microtubule
cellular_component GO:0030286 dynein complex
cellular_component GO:0031514 motile cilium
cellular_component GO:0005868 cytoplasmic dynein complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed
molecular_function GO:0008092 cytoskeletal protein binding
molecular_function GO:0045505 dynein intermediate chain binding
molecular_function GO:0051959 dynein light intermediate chain binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024627.2.1MELO3C024627.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..90
e-value: 9.5E-42
score: 154.7
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..90
e-value: 1.3E-30
score: 105.4
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 1..90
IPR037177Dynein light chain superfamilyGENE3DG3DSA:3.30.740.10coord: 1..90
e-value: 1.0E-29
score: 104.4
IPR037177Dynein light chain superfamilySUPERFAMILYSSF54648DLCcoord: 1..91
NoneNo IPR availablePANTHERPTHR11886:SF47SUBFAMILY NOT NAMEDcoord: 1..90

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C024627.2CmaCh11G006160Cucurbita maxima (Rimu)cmamedB115
MELO3C024627.2CmoCh11G006240Cucurbita moschata (Rifu)cmomedB106
MELO3C024627.2Lsi06G008610Bottle gourd (USVL1VR-Ls)lsimedB425
MELO3C024627.2Cp4.1LG04g09900Cucurbita pepo (Zucchini)cpemedB736
MELO3C024627.2CsGy1G016720Cucumber (Gy14) v2cgybmedB051
MELO3C024627.2Cla010655Watermelon (97103) v1medwmB284
MELO3C024627.2ClCG06G008710Watermelon (Charleston Gray)medwcgB247
MELO3C024627.2Cla97C06G118450Watermelon (97103) v2medwmbB248
MELO3C024627.2Carg12204Silver-seed gourdcarmedB0036
MELO3C024627.2CsaV3_1G024400Cucumber (Chinese Long) v3cucmedB057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024627.2Silver-seed gourdcarmedB0135
MELO3C024627.2Silver-seed gourdcarmedB0581
MELO3C024627.2Cucumber (Chinese Long) v3cucmedB112
MELO3C024627.2Watermelon (97103) v2medwmbB226
MELO3C024627.2Wax gourdmedwgoB275
MELO3C024627.2Wax gourdmedwgoB290
MELO3C024627.2Cucumber (Gy14) v2cgybmedB096
MELO3C024627.2Cucumber (Gy14) v1cgymedB168
MELO3C024627.2Cucurbita maxima (Rimu)cmamedB060
MELO3C024627.2Cucurbita maxima (Rimu)cmamedB814
MELO3C024627.2Cucurbita moschata (Rifu)cmomedB052
MELO3C024627.2Cucurbita moschata (Rifu)cmomedB156
MELO3C024627.2Cucurbita moschata (Rifu)cmomedB809
MELO3C024627.2Cucurbita pepo (Zucchini)cpemedB107
MELO3C024627.2Cucurbita pepo (Zucchini)cpemedB392
MELO3C024627.2Cucurbita pepo (Zucchini)cpemedB886
MELO3C024627.2Wild cucumber (PI 183967)cpimedB108
MELO3C024627.2Cucumber (Chinese Long) v2cumedB109
MELO3C024627.2Melon (DHL92) v3.6.1medmedB105
MELO3C024627.2Watermelon (Charleston Gray)medwcgB223
MELO3C024627.2Watermelon (97103) v1medwmB277