MELO3C024203 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024203
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPyruvate dehydrogenase E1 component
Locationchr1 : 4050202 .. 4050570 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAATGTCTGAAGGAGCTGATGGCGGTGGTGATGCTCAGCCGCTTCTGCTGCCTTCCCCCAACCCTTCTACTACTTCATACAAACCGGCTGGTTTCAAGTTCCGGCAAATAGTTTTAGGCATTCTTTTCCTACTCTGCCTCAAAAGCAGATCGACGCTGCCATTTCATACGGTCGTCAACGTCATTGATATAATCCCTTTGGAAGAGGAAAGGGAAATGAAGAAGGGTCGTCTTAAGCAGATTGTGAAAGAGAAGAATTTAGTAGCACTAGAGAAGGAATTCGGCGGTGTAGAAGAGGCTGTTTCGTTTATGCATTCCGAATGGGACACACCGGTAACCATTTTCTTTCTACGGATACTCTAA

mRNA sequence

ATGAAAGGAATGTCTGAAGGAGCTGATGGCGGTGGTGATGCTCAGCCGCTTCTGCTGCCTTCCCCCAACCCTTCTACTACTTCATACAAACCGGCTGGTTTCAAGTTCCGGCAAATAGTTTTAGGCATTCTTTTCCTACTCTGCCTCAAAAGCAGATCGACGCTGCCATTTCATACGGTCGTCAACGTCATTGATATAATCCCTTTGGAAGAGGAAAGGGAAATGAAGAAGGGTCGTCTTAAGCAGATTGTGAAAGAGAAGAATTTAGTAGCACTAGAGAAGGAATTCGGCGGTGTAGAAGAGGCTGTTTCGTTTATGCATTCCGAATGGGACACACCGGTAACCATTTTCTTTCTACGGATACTCTAA

Coding sequence (CDS)

ATGAAAGGAATGTCTGAAGGAGCTGATGGCGGTGGTGATGCTCAGCCGCTTCTGCTGCCTTCCCCCAACCCTTCTACTACTTCATACAAACCGGCTGGTTTCAAGTTCCGGCAAATAGTTTTAGGCATTCTTTTCCTACTCTGCCTCAAAAGCAGATCGACGCTGCCATTTCATACGGTCGTCAACGTCATTGATATAATCCCTTTGGAAGAGGAAAGGGAAATGAAGAAGGGTCGTCTTAAGCAGATTGTGAAAGAGAAGAATTTAGTAGCACTAGAGAAGGAATTCGGCGGTGTAGAAGAGGCTGTTTCGTTTATGCATTCCGAATGGGACACACCGGTAACCATTTTCTTTCTACGGATACTCTAA

Protein sequence

MKGMSEGADGGGDAQPLLLPSPNPSTTSYKPAGFKFRQIVLGILFLLCLKSRSTLPFHTVVNVIDIIPLEEEREMKKGRLKQIVKEKNLVALEKEFGGVEEAVSFMHSEWDTPVTIFFLRIL*
Homology
[Close]
BLAST of MELO3C024203 vs. TrEMBL
Match: A0A0A0K156_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032790 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.4e-21
Identity = 76/140 (54.29%), Postives = 88/140 (62.86%), Query Frame = 1 

Query: 4   MSEGA--DGGGDAQPLLLPSPNP--STTSYKPAGFKF-RQIVLGILFLL-CL-KSRSTLP 63
           M EG   D GG AQPLLL S +   +TTS KPAGFK  +QIVL I FLL CL ++RS LP
Sbjct: 1   MFEGGTDDNGGGAQPLLLASLSAPTTTTSNKPAGFKLIQQIVLSIRFLLICLNRTRSPLP 60

Query: 64  F-HTVVN-----------------------VIDIIPLEEEREMKKGRLKQIVKEKNLVAL 113
             HT ++                       VIDI  LE+EREMKK RLK+IVKEKNL AL
Sbjct: 61  LLHTPIDDIIPLEEERAVIDDIIPSEEEKEVIDIARLEKEREMKKDRLKEIVKEKNLAAL 120

[Close]
BLAST of MELO3C024203 vs. NCBI nr
Match: gi|449453746|ref|XP_004144617.1| (PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-21
Identity = 76/142 (53.52%), Postives = 89/142 (62.68%), Query Frame = 1 

Query: 4   MSEGA--DGGGDAQPLLLPSPNP--STTSYKPAGFKF-RQIVLGILFLL-CL-KSRSTLP 63
           M EG   D GG AQPLLL S +   +TTS KPAGFK  +QIVL I FLL CL ++RS LP
Sbjct: 1   MFEGGTDDNGGGAQPLLLASLSAPTTTTSNKPAGFKLIQQIVLSIRFLLICLNRTRSPLP 60

Query: 64  F-HTVVN-----------------------VIDIIPLEEEREMKKGRLKQIVKEKNLVAL 115
             HT ++                       VIDI  LE+EREMKK RLK+IVKEKNL AL
Sbjct: 61  LLHTPIDDIIPLEEERAVIDDIIPSEEEKEVIDIARLEKEREMKKDRLKEIVKEKNLAAL 120

[Close]
BLAST of MELO3C024203 vs. NCBI nr
Match: gi|700188187|gb|KGN43420.1| (hypothetical protein Csa_7G032790 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 7.8e-21
Identity = 76/140 (54.29%), Postives = 88/140 (62.86%), Query Frame = 1 

Query: 4   MSEGA--DGGGDAQPLLLPSPNP--STTSYKPAGFKF-RQIVLGILFLL-CL-KSRSTLP 63
           M EG   D GG AQPLLL S +   +TTS KPAGFK  +QIVL I FLL CL ++RS LP
Sbjct: 1   MFEGGTDDNGGGAQPLLLASLSAPTTTTSNKPAGFKLIQQIVLSIRFLLICLNRTRSPLP 60

Query: 64  F-HTVVN-----------------------VIDIIPLEEEREMKKGRLKQIVKEKNLVAL 113
             HT ++                       VIDI  LE+EREMKK RLK+IVKEKNL AL
Sbjct: 61  LLHTPIDDIIPLEEERAVIDDIIPSEEEKEVIDIARLEKEREMKKDRLKEIVKEKNLAAL 120

The following BLAST results are available for this feature:
BLAST of MELO3C024203 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K156_CUCSA5.4e-2154.29Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032790 PE=4 SV=1[more]
BLAST of MELO3C024203 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453746|ref|XP_004144617.1|4.6e-2153.52PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Cucumis sa... [more]
gi|700188187|gb|KGN43420.1|7.8e-2154.29hypothetical protein Csa_7G032790 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024203T1MELO3C024203T1mRNA