MELO3C024059 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024059
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Similar to ATP-dependent RNA helicase
Location	chr1 : 7890615 .. 7891232 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAAGCACATTTATGGATGCCTTTGTGATGGGGCTGTCACCGGAACTGAGGGCAGAGGTGGTAAGTCGGCATCCGAAGAAGAAGGATGAATGTATGAGAGAAGCCCAGTTGGTGAACGATCACAAAAATCTGGCTTTGAATGAGTTGGGGCTTCAAGGGGCTAATACGATGAAAGCCCAGCTGACGAAAGCCCCTATACCCCAGATGGAAAAATCTGAATTAAAAGACAAGGAGACCCAAACCAGACAAATAACTCTAAACACACGTGGGAATTTCGTAAAGAAAGAAGCGGGGGAGGCATCGACGAAGAGACTCTCAGATAGTGAGTTACAAATGAGGATTGATAAAGGTCTGTATTTCAGGTGTAACGACAAATGGTCACAAGGACACTGGGGCAAGATGAGAGAGAATAGAGAACTGAGGTTGTATATTACGAATGTCAAAGTGGAACTCGAGGAAGAAGGAGAAGTCAAAACAGAGGCTAATGAAATCGTGGAACTGAAAAATTATGGAGCTAGGAGACAATGTGGAAATCTCCTTGAGGTCCTTACATGGTTTTTCCGACAAAGGGGCCATAAAACTGAAGGGAAAAATAAAAGGGATAGGTGGTGA

mRNA sequence

ATGGCAGAAAGCACATTTATGGATGCCTTTGTGATGGGGCTGTCACCGGAACTGAGGGCAGAGGTGGTAAGTCGGCATCCGAAGAAGAAGGATGAATGTATGAGAGAAGCCCAGTTGGTGAACGATCACAAAAATCTGGCTTTGAATGAGTTGGGGCTTCAAGGGGCTAATACGATGAAAGCCCAGCTGACGAAAGCCCCTATACCCCAGATGGAAAAATCTGAATTAAAAGACAAGGAGACCCAAACCAGACAAATAACTCTAAACACACGTGGGAATTTCGTAAAGAAAGAAGCGGGGGAGGCATCGACGAAGAGACTCTCAGATAGTGAGTTACAAATGAGGATTGATAAAGGTCTGTATTTCAGGTGTAACGACAAATGGTCACAAGGACACTGGGGCAAGATGAGAGAGAATAGAGAACTGAGGTTGTATATTACGAATGTCAAAGTGGAACTCGAGGAAGAAGGAGAAGTCAAAACAGAGGCTAATGAAATCGTGGAACTGAAAAATTATGGAGCTAGGAGACAATGTGGAAATCTCCTTGAGGTCCTTACATGGTTTTTCCGACAAAGGGGCCATAAAACTGAAGGGAAAAATAAAAGGGATAGGTGGTGA

Coding sequence (CDS)

ATGGCAGAAAGCACATTTATGGATGCCTTTGTGATGGGGCTGTCACCGGAACTGAGGGCAGAGGTGGTAAGTCGGCATCCGAAGAAGAAGGATGAATGTATGAGAGAAGCCCAGTTGGTGAACGATCACAAAAATCTGGCTTTGAATGAGTTGGGGCTTCAAGGGGCTAATACGATGAAAGCCCAGCTGACGAAAGCCCCTATACCCCAGATGGAAAAATCTGAATTAAAAGACAAGGAGACCCAAACCAGACAAATAACTCTAAACACACGTGGGAATTTCGTAAAGAAAGAAGCGGGGGAGGCATCGACGAAGAGACTCTCAGATAGTGAGTTACAAATGAGGATTGATAAAGGTCTGTATTTCAGGTGTAACGACAAATGGTCACAAGGACACTGGGGCAAGATGAGAGAGAATAGAGAACTGAGGTTGTATATTACGAATGTCAAAGTGGAACTCGAGGAAGAAGGAGAAGTCAAAACAGAGGCTAATGAAATCGTGGAACTGAAAAATTATGGAGCTAGGAGACAATGTGGAAATCTCCTTGAGGTCCTTACATGGTTTTTCCGACAAAGGGGCCATAAAACTGAAGGGAAAAATAAAAGGGATAGGTGGTGA

Protein sequence

MAESTFMDAFVMGLSPELRAEVVSRHPKKKDECMREAQLVNDHKNLALNELGLQGANTMKAQLTKAPIPQMEKSELKDKETQTRQITLNTRGNFVKKEAGEASTKRLSDSELQMRIDKGLYFRCNDKWSQGHWGKMRENRELRLYITNVKVELEEEGEVKTEANEIVELKNYGARRQCGNLLEVLTWFFRQRGHKTEGKNKRDRW*

Homology

[Close]

BLAST of MELO3C024059 vs. Swiss-Prot
Match: RH39_ARATH (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2)

HSP 1 Score: 308.9 bits (790), Expect = 5.4e-83
Identity = 164/262 (62.60%), Postives = 198/262 (75.57%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVPA++RVENLKKFK 
Sbjct: 359 LLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKD 418

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           ++GDCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSLV +K
Sbjct: 419 EEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVSRK 478

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIK---ASTGSRAKSA 180
           D +LA RIEEA++ NESLESLT D+VRRD AR  IT+ K ++ K I+       SR K +
Sbjct: 479 DQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSRDKPS 538

Query: 181 TSAPKSSSVHSKGETGKASYS--ERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRR 240
           +S+P + S   K    K+S S   + +K   P  K  K  R I +   S   + +A+R +
Sbjct: 539 SSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGS---RSIAARGK 598

Query: 241 PGSAIKSSGQKLNVVGFRGRSN 258
            GS  +  G+KL+VVGFRG+S+
Sbjct: 599 TGSD-RRPGKKLSVVGFRGKSS 616

[Close]

BLAST of MELO3C024059 vs. Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.3e-80
Identity = 170/282 (60.28%), Postives = 198/282 (70.21%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPA++RVENL KF++
Sbjct: 357 LLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRN 416

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           ++GDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLV KK
Sbjct: 417 EEGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKK 476

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHK--------------------T 180
           D  LATRIEEA++KNESLE+LT ++VRR     + T  K                    T
Sbjct: 477 DVTLATRIEEAMKKNESLEALTTNNVRRAAVNPQYTSTKGRPSALKVVNQKGRRGVALQT 536

Query: 181 KNAKLIKASTGSRAKS-ATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIP 240
           K+++++K +T SR +S   S P+S S  S    GKA              K V+S++  P
Sbjct: 537 KSSRIVKDTTSSRRRSPIRSQPRSKSTSS----GKA--------------KPVRSAK--P 596

Query: 241 RKPSSETKKQVASRRRP----GSAIKSSGQKLNVVGFRGRSN 258
            K SS + K   SR RP    G A+   G KL+VVGFRGRS+
Sbjct: 597 SKSSSPSPKVAKSRPRPEGRKGDALNKLGSKLSVVGFRGRSS 618

[Close]

BLAST of MELO3C024059 vs. Swiss-Prot
Match: RH22_ORYSJ (DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 1


Query: 13  NRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCTD 72
           NR MVF NT++++ +V   L    +  + YH +   ++R +NL+ F+ + G    LVCTD
Sbjct: 427 NRTMVFTNTVDAANSVSDILQRVGVPCILYHRDSSLEERAKNLQSFRENGG---VLVCTD 486

Query: 73  LAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEEA 132
            AARGLD+ +V HVI  +F + ++D+LHR GRTAR G  G VTSL  + +  L   + +A
Sbjct: 487 AAARGLDVPNVSHVIQAEFAACAVDFLHRVGRTARAGQSGIVTSLYTEANRDLVRAVRQA 546

Query: 133 IQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKAS 170
            +         A  V +  +R R   +K K   L K++
Sbjct: 547 EE--------LAQPVEKAFSRKRSFRNKLKKQALHKST 573

[Close]

BLAST of MELO3C024059 vs. Swiss-Prot
Match: DBP8_LODEL (ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=DBP8 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-18
Identity = 57/162 (35.19%), Postives = 84/162 (51.85%), Query Frame = 1


Query: 16  MVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCTDLAA 75
           +VF N   ++  +   L + +    + H E+P  +R  +L +FK+  G    L+ TD+A+
Sbjct: 260 VVFVNRTMTAEVLRRMLRKLEFKVASLHSEMPQTERTNSLHRFKA--GAARILIATDVAS 319

Query: 76  RGLDLD-VDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEEAIQK 135
           RGLD+  V+ V+ FD P++  D++HR GRTAR G KG   S++G+KD      IEE I K
Sbjct: 320 RGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAISIIGEKDIERIESIEERINK 379

Query: 136 N-ESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAK 176
             E LE +  D V  D  +   T  +     + K S G R K
Sbjct: 380 KMELLEGVDDDKVINDSLQKATTAKREAMLDMDKESFGERRK 419

[Close]

BLAST of MELO3C024059 vs. Swiss-Prot
Match: RH10_ORYSJ (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica GN=Os03g0669000 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-18
Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 1


Query: 12  GNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCT 71
           G+ +M+F  T  S+R +   L   +   ++  G++   KR+  L +FK+ D  C  L+CT
Sbjct: 282 GSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKD--CNILICT 341

Query: 72  DLAARGLDLD-VDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEE 131
           D+A+RGLD+  VD VI +D P NS DY+HR GRTAR G  G   SLV + + +    IE+
Sbjct: 342 DVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEK 401

Query: 132 AIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAK 176
            +     +     D+    I R+RI++ K      +K   G + K
Sbjct: 402 LL--GYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKK 442

[Close]

BLAST of MELO3C024059 vs. TrEMBL
Match: A0A0A0K9G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291710 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.7e-132
Identity = 248/266 (93.23%), Postives = 256/266 (96.24%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           M+QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS
Sbjct: 1   MVQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           DD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK
Sbjct: 61  DDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SRAKSATS 180
           D+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S AKSATS
Sbjct: 121 DNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSGAKSATS 180

Query: 181 APKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSA 240
           APKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR+RPGSA
Sbjct: 181 APKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASRKRPGSA 240

Query: 241 IKSSGQKLNVVGFRGRSNQFDKRRSV 266
           IKSSGQKLNVVGFRGRSNQ   RRS+
Sbjct: 241 IKSSGQKLNVVGFRGRSNQSGNRRSL 266

[Close]

BLAST of MELO3C024059 vs. TrEMBL
Match: W9R456_9ROSA (DEAD-box ATP-dependent RNA helicase 39 OS=Morus notabilis GN=L484_002724 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.3e-88
Identity = 180/263 (68.44%), Postives = 210/263 (79.85%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQ STVNYHGEVPA++RVENLKKFK+
Sbjct: 375 LLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLSENQTSTVNYHGEVPAEQRVENLKKFKT 434

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           +DGDCPTLVC+DLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLV KK
Sbjct: 435 EDGDCPTLVCSDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKK 494

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 180
           D  LATRIEEA++KNESLESL+ +SVRRDIAR RITE K KN KLIK +   R++ +  +
Sbjct: 495 DVALATRIEEAMRKNESLESLSVNSVRRDIARARITEQKGKNEKLIKVAK-QRSRDSAKS 554

Query: 181 PKSSSVHSKGETGKASYSERTQKPGVPVSKLVK-SSRNIPRKPSSETKKQVASRRRPGSA 240
            +   V SK  +G A ++    K  V VSK VK S  +  RK SS  +KQV +  +  SA
Sbjct: 555 YQDQGVKSKKASGPAKFA----KASVKVSKTVKLSGASSSRKSSSSARKQVVN--KGSSA 614

Query: 241 IKSSGQKLNVVGFRGRSNQFDKR 263
            KS+  KLNVVGFRGR++  +K+
Sbjct: 615 AKSTSSKLNVVGFRGRNSWSNKK 630

[Close]

BLAST of MELO3C024059 vs. TrEMBL
Match: A0A162AC97_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001196 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 7.3e-87
Identity = 189/296 (63.85%), Postives = 216/296 (72.97%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPA++RVENLKKFKS
Sbjct: 363 LLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAEQRVENLKKFKS 422

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           DDGDCPTLVCTDLAARGLDLDVDHVIMFDFP  SIDYLHRTGRTARMGAKGKVTSL+ KK
Sbjct: 423 DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLTSIDYLHRTGRTARMGAKGKVTSLIAKK 482

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 180
           D  LATRIEEAI KNESLESLT D ++RD AR +I+++  KNAKLIK S  SR K A S 
Sbjct: 483 DHSLATRIEEAIMKNESLESLTVDYIKRDTARSKISQNTVKNAKLIKVS--SRGKKAVSG 542

Query: 181 PKSSSVHSK--------GETGKASYSERTQKPGVPVSKLVKSSR-NIPRKPSSETKKQ-- 240
            KS+SVH K          +G+AS + ++++    VS+ +KSS  +  R P S  KKQ  
Sbjct: 543 -KSASVHGKAGSTRASGSNSGRASSTIKSKRGATKVSRPLKSSNTSNSRGPVSGGKKQSS 602

Query: 241 ------------VASRRRP------------GSAIKSSGQKLNVVGFRGRSNQFDK 262
                       V+S R P             SA+KS+  KLNVVGFRGRS+  +K
Sbjct: 603 GFKVSKPVKSSTVSSNRGPATGGKKQTGSGKSSAVKST-SKLNVVGFRGRSSSSNK 654

[Close]

BLAST of MELO3C024059 vs. TrEMBL
Match: A0A061FHR1_THECC (DEAD-box ATP-dependent RNA helicase 39 isoform 1 OS=Theobroma cacao GN=TCM_035812 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.5e-87
Identity = 175/257 (68.09%), Postives = 200/257 (77.82%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPA++RVENL KFKS
Sbjct: 362 LLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKS 421

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           DDGDCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLV KK
Sbjct: 422 DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKK 481

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 180
           + +LA RIEEAI+KNESLESLTA +VRRDIAR +ITE K KNAKLIK S       A SA
Sbjct: 482 NVLLAERIEEAIRKNESLESLTAVNVRRDIARAQITEQKGKNAKLIKVSNQKNKTKAVSA 541

Query: 181 PKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSAI 240
                 H  G+    + S ++     P  K++K S+N+    +S   K+  S     S +
Sbjct: 542 ------HISGKKPSIAKSVKSPTAARPSKKIIKVSKNMKSAKASSVGKKNRS-----SGV 601

Query: 241 KSSGQKLNVVGFRGRSN 258
            S+ +KL+VVGFRGR++
Sbjct: 602 NSTAKKLSVVGFRGRAS 607

[Close]

BLAST of MELO3C024059 vs. TrEMBL
Match: A0A0B0PKP3_GOSAR (DEAD-box ATP-dependent RNA helicase 39-like protein OS=Gossypium arboreum GN=F383_09943 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.5e-87
Identity = 180/264 (68.18%), Postives = 204/264 (77.27%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPA++RVENL KFKS
Sbjct: 363 LLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAEQRVENLNKFKS 422

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           DDGDCPTLVCTDLAARGLDLDV+HVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLV KK
Sbjct: 423 DDGDCPTLVCTDLAARGLDLDVNHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKK 482

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 180
           D +LA RIEEAI+KNESLESLT D+VRRD AR RITE K KN KL KAS       A SA
Sbjct: 483 DLLLAERIEEAIRKNESLESLTVDNVRRDTARTRITEQKGKNVKLFKASNQKNKTKAVSA 542

Query: 181 PKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSAI 240
               SV + G+    + S ++  P  P  K+VK S+++    +S   K+  +R   GS  
Sbjct: 543 ----SVLTSGKKPTIAKSVKSTAPAKPSKKIVKVSKSLKTAKTSAVGKK--NRSIGGS-- 602

Query: 241 KSSGQKLNVVGFRGRSNQFDKRRS 265
            S G+KL VVGFRG+++   KR S
Sbjct: 603 -SEGKKLKVVGFRGQASS-SKRES 616

[Close]

BLAST of MELO3C024059 vs. TAIR10
Match: AT4G09730.1 (AT4G09730.1 RH39)

HSP 1 Score: 308.9 bits (790), Expect = 3.0e-84
Identity = 164/262 (62.60%), Postives = 198/262 (75.57%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKG++VMVFCNTLNSSRAVDH+L ENQISTVNYHGEVPA++RVENLKKFK 
Sbjct: 359 LLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKD 418

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           ++GDCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSLV +K
Sbjct: 419 EEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVSRK 478

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIK---ASTGSRAKSA 180
           D +LA RIEEA++ NESLESLT D+VRRD AR  IT+ K ++ K I+       SR K +
Sbjct: 479 DQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSRDKPS 538

Query: 181 TSAPKSSSVHSKGETGKASYS--ERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRR 240
           +S+P + S   K    K+S S   + +K   P  K  K  R I +   S   + +A+R +
Sbjct: 539 SSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGS---RSIAARGK 598

Query: 241 PGSAIKSSGQKLNVVGFRGRSN 258
            GS  +  G+KL+VVGFRG+S+
Sbjct: 599 TGSD-RRPGKKLSVVGFRGKSS 616

[Close]

BLAST of MELO3C024059 vs. TAIR10
Match: AT1G59990.1 (AT1G59990.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 58/156 (37.18%), Postives = 78/156 (50.00%), Query Frame = 1


Query: 14  RVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCTDL 73
           R MVF NT+ +  AV   L +  I    YH      +R   L  F+   G     VCTD 
Sbjct: 426 RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRETGG---VFVCTDA 485

Query: 74  AARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEEAI 133
           AARG+D+ +V HVI  DF S+++D+LHR GRTAR G  G VTSL  + +  L   I EA+
Sbjct: 486 AARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEANRDLVEAIREAV 545

Query: 134 QKNESLESLTADSVRRDIARDRITEHKTKNAKLIKA 169
           +  + +E+          +R R   +K K    +KA
Sbjct: 546 KMGQPVETA--------FSRKRGFRNKVKKRAFLKA 570

[Close]

BLAST of MELO3C024059 vs. TAIR10
Match: AT5G60990.1 (AT5G60990.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 59/161 (36.65%), Postives = 84/161 (52.17%), Query Frame = 1


Query: 16  MVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCTDLAA 75
           M+F  T + +R +   L       +   G++   KR+  L KFK+  G+C  LVCTD+A+
Sbjct: 264 MIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKA--GECNILVCTDVAS 323

Query: 76  RGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEEAIQK 135
           RGLD+  VD VI +D P+NS DY+HR GRTAR G  G   SLV + +     +IE+ I K
Sbjct: 324 RGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGK 383

Query: 136 NESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAK 176
              L    A+        +R+ E K  +A  +K S G + +
Sbjct: 384 --KLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRR 420

[Close]

BLAST of MELO3C024059 vs. TAIR10
Match: AT1G31970.1 (AT1G31970.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-16
Identity = 61/180 (33.89%), Postives = 87/180 (48.33%), Query Frame = 1


Query: 13  NRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDDGDCPTLVCTD 72
           NRV+VF      +  ++ FL +     V+ HG     +R  +L  FK  +G CP LV TD
Sbjct: 367 NRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFK--EGSCPLLVATD 426

Query: 73  LAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDDILATRIEEA 132
           +AARGLD+ DV+ VI + FP  + DY+HR GRT R G KG   +     +  LA  +   
Sbjct: 427 VAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNV 486

Query: 133 IQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSAPKSSSVHSKGE 192
           ++  E+ + + AD ++        T  K K +KL  A     A  A  A K +  +S  E
Sbjct: 487 LR--EAGQVVPADLLKFG------THVKKKESKLYGAHFKEIAADAPKATKITFDNSDDE 536

[Close]

BLAST of MELO3C024059 vs. TAIR10
Match: AT1G16280.1 (AT1G16280.1 RNA helicase 36)

HSP 1 Score: 81.6 bits (200), Expect = 7.9e-16
Identity = 60/185 (32.43%), Postives = 87/185 (47.03%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNR-VMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFK 60
           ++ +L     KG R  M+F +T  + + +   L E ++  +  H       R+  L KFK
Sbjct: 290 LVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFK 349

Query: 61  SDDGDCPTLVCTDLAARGLDLD-VDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVG 120
           S  G  P L+ TD+A+RGLD+  VD VI +D P +  DY+HR GRTAR G  G   S++ 
Sbjct: 350 S--GKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIIT 409

Query: 121 KKDDILATRIEEAIQK----------NESLESLTADSVRRDIAR---DRITEHKTKNAKL 171
           + D  L  +IEE + K           +SLE       +R       D   E K K+ + 
Sbjct: 410 ETDVKLIHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRK 469

[Close]

BLAST of MELO3C024059 vs. NCBI nr
Match: gi|659123914|ref|XP_008461901.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 5.5e-144
Identity = 265/267 (99.25%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS
Sbjct: 367 LLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 426

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK
Sbjct: 427 DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 486

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 180
           DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA
Sbjct: 487 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 546

Query: 181 PKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSAI 240
           PKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSAI
Sbjct: 547 PKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSAI 606

Query: 241 KSSGQKLNVVGFRGRSNQFDKRRSVSS 268
           KSSGQKLNVVGFRGRSNQFDKRRSVSS
Sbjct: 607 KSSGQKLNVVGFRGRSNQFDKRRSVSS 633

[Close]

BLAST of MELO3C024059 vs. NCBI nr
Match: gi|449443857|ref|XP_004139692.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus])

HSP 1 Score: 481.9 bits (1239), Expect = 7.4e-133
Identity = 250/268 (93.28%), Postives = 258/268 (96.27%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS
Sbjct: 367 LLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 426

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           DD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK
Sbjct: 427 DDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 486

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SRAKSATS 180
           D+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S AKSATS
Sbjct: 487 DNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSGAKSATS 546

Query: 181 APKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSA 240
           APKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR+RPGSA
Sbjct: 547 APKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASRKRPGSA 606

Query: 241 IKSSGQKLNVVGFRGRSNQFDKRRSVSS 268
           IKSSGQKLNVVGFRGRSNQ   RRSVSS
Sbjct: 607 IKSSGQKLNVVGFRGRSNQSGNRRSVSS 634

[Close]

BLAST of MELO3C024059 vs. NCBI nr
Match: gi|700189218|gb|KGN44451.1| (hypothetical protein Csa_7G291710 [Cucumis sativus])

HSP 1 Score: 478.4 bits (1230), Expect = 8.2e-132
Identity = 248/266 (93.23%), Postives = 256/266 (96.24%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           M+QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS
Sbjct: 1   MVQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           DD DCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK
Sbjct: 61  DDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTG-SRAKSATS 180
           D+ILATRIEEAI+KNESLESLTADSV RD+AR+RITEHKTKNAKLIKASTG S AKSATS
Sbjct: 121 DNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSGAKSATS 180

Query: 181 APKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSSETKKQVASRRRPGSA 240
           APKSSSVHSKGE GKASYSERT+KPGV VSK VKSSRNIPRKPSSETKKQVASR+RPGSA
Sbjct: 181 APKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASRKRPGSA 240

Query: 241 IKSSGQKLNVVGFRGRSNQFDKRRSV 266
           IKSSGQKLNVVGFRGRSNQ   RRS+
Sbjct: 241 IKSSGQKLNVVGFRGRSNQSGNRRSL 266

[Close]

BLAST of MELO3C024059 vs. NCBI nr
Match: gi|1009137827|ref|XP_015886265.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Ziziphus jujuba])

HSP 1 Score: 340.9 bits (873), Expect = 2.0e-90
Identity = 188/272 (69.12%), Postives = 216/272 (79.41%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPA++RVENL KFKS
Sbjct: 373 LLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLNENQISTVNYHGEVPAEQRVENLNKFKS 432

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           +DGDCPTLVCTDLAARGLDL VDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLV KK
Sbjct: 433 EDGDCPTLVCTDLAARGLDLHVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKK 492

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 180
           D +LATRIEEAI+KNESLESLT DSVRRDIAR +IT+ K ++AKLIK +  ++ K+   +
Sbjct: 493 DHVLATRIEEAIRKNESLESLTVDSVRRDIARAKITDQKGRDAKLIKVAKNNK-KTKGDS 552

Query: 181 PKSSSVHSKG---ETGKASYSERTQK-PGVPVSKLVK-SSRNIPRKPSSETKKQVASRRR 240
            KSS VH+K    +  K+S S +T K  G+  SK VK SS     KPS   KK++  +R 
Sbjct: 553 VKSSRVHNKAVGVKPRKSSVSAKTTKGGGIHASKPVKLSSSRSSGKPSLSRKKKLDGKR- 612

Query: 241 PGSAIKSSGQKLNVVGFRGRSNQFDKRRSVSS 268
             S  KS+  KLNVVGFRGRS+  DK+  + S
Sbjct: 613 -FSVDKSTDSKLNVVGFRGRSSWSDKKEKMMS 641

[Close]

BLAST of MELO3C024059 vs. NCBI nr
Match: gi|703072970|ref|XP_010089424.1| (DEAD-box ATP-dependent RNA helicase 39 [Morus notabilis])

HSP 1 Score: 334.3 bits (856), Expect = 1.9e-88
Identity = 180/263 (68.44%), Postives = 210/263 (79.85%), Query Frame = 1


Query: 1   MMQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKS 60
           ++QVLEPSLAKGN+VMVFCNTLNSSRAVDHFL ENQ STVNYHGEVPA++RVENLKKFK+
Sbjct: 375 LLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLSENQTSTVNYHGEVPAEQRVENLKKFKT 434

Query: 61  DDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVGKK 120
           +DGDCPTLVC+DLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLV KK
Sbjct: 435 EDGDCPTLVCSDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKK 494

Query: 121 DDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSRAKSATSA 180
           D  LATRIEEA++KNESLESL+ +SVRRDIAR RITE K KN KLIK +   R++ +  +
Sbjct: 495 DVALATRIEEAMRKNESLESLSVNSVRRDIARARITEQKGKNEKLIKVAK-QRSRDSAKS 554

Query: 181 PKSSSVHSKGETGKASYSERTQKPGVPVSKLVK-SSRNIPRKPSSETKKQVASRRRPGSA 240
            +   V SK  +G A ++    K  V VSK VK S  +  RK SS  +KQV +  +  SA
Sbjct: 555 YQDQGVKSKKASGPAKFA----KASVKVSKTVKLSGASSSRKSSSSARKQVVN--KGSSA 614

Query: 241 IKSSGQKLNVVGFRGRSNQFDKR 263
            KS+  KLNVVGFRGR++  +K+
Sbjct: 615 AKSTSSKLNVVGFRGRNSWSNKK 630

The following BLAST results are available for this feature:

BLAST of MELO3C024059 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH39_ARATH	5.4e-83	62.60	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana GN=RH39 PE=2 SV=2	[more]
RH39_ORYSJ	7.3e-80	60.28	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0...	[more]
RH22_ORYSJ	2.1e-18	36.08	DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0...	[more]
DBP8_LODEL	4.6e-18	35.19	ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus (strain ATCC 11503 ...	[more]
RH10_ORYSJ	4.6e-18	34.55	DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica GN=Os03g0...	[more]

BLAST of MELO3C024059 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9G2_CUCSA	5.7e-132	93.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291710 PE=4 SV=1	[more]
W9R456_9ROSA	1.3e-88	68.44	DEAD-box ATP-dependent RNA helicase 39 OS=Morus notabilis GN=L484_002724 PE=4 SV...	[more]
A0A162AC97_DAUCA	7.3e-87	63.85	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001196 PE=4 SV=1	[more]
A0A061FHR1_THECC	9.5e-87	68.09	DEAD-box ATP-dependent RNA helicase 39 isoform 1 OS=Theobroma cacao GN=TCM_03581...	[more]
A0A0B0PKP3_GOSAR	9.5e-87	68.18	DEAD-box ATP-dependent RNA helicase 39-like protein OS=Gossypium arboreum GN=F38...	[more]

BLAST of MELO3C024059 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09730.1	3.0e-84	62.60	RH39	[more]
AT1G59990.1	1.3e-18	37.18	DEA(D/H)-box RNA helicase family protein	[more]
AT5G60990.1	1.4e-17	36.65	DEA(D/H)-box RNA helicase family protein	[more]
AT1G31970.1	6.0e-16	33.89	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	7.9e-16	32.43	RNA helicase 36	[more]

BLAST of MELO3C024059 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123914\|ref\|XP_008461901.1\|	5.5e-144	99.25	PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo]	[more]
gi\|449443857\|ref\|XP_004139692.1\|	7.4e-133	93.28	PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus]	[more]
gi\|700189218\|gb\|KGN44451.1\|	8.2e-132	93.23	hypothetical protein Csa_7G291710 [Cucumis sativus]	[more]
gi\|1009137827\|ref\|XP_015886265.1\|	2.0e-90	69.12	PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Ziziphus jujuba]	[more]
gi\|703072970\|ref\|XP_010089424.1\|	1.9e-88	68.44	DEAD-box ATP-dependent RNA helicase 39 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0017111	nucleoside-triphosphatase activity
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024059T1	MELO3C024059T1	mRNA
MELO3C024059T2	MELO3C024059T2	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024059	Cucumber (Chinese Long) v3	cucmeB540
MELO3C024059	Watermelon (97103) v2	mewmbB230
MELO3C024059	Wax gourd	mewgoB258
MELO3C024059	Cucumber (Gy14) v1	cgymeB085
MELO3C024059	Cucurbita maxima (Rimu)	cmameB019
MELO3C024059	Cucurbita maxima (Rimu)	cmameB396
MELO3C024059	Cucurbita moschata (Rifu)	cmomeB008
MELO3C024059	Cucurbita moschata (Rifu)	cmomeB387
MELO3C024059	Wild cucumber (PI 183967)	cpimeB528
MELO3C024059	Cucumber (Chinese Long) v2	cumeB525
MELO3C024059	Watermelon (Charleston Gray)	mewcgB181
MELO3C024059	Watermelon (97103) v1	mewmB204
MELO3C024059	Cucurbita pepo (Zucchini)	cpemeB505
MELO3C024059	Cucurbita pepo (Zucchini)	cpemeB714
MELO3C024059	Bottle gourd (USVL1VR-Ls)	lsimeB189
MELO3C024059	Cucumber (Gy14) v2	cgybmeB460
MELO3C024059	Silver-seed gourd	carmeB0276