MELO3C023682.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACATTTTTGTGGTATGATTAAAATTTAAAACATGAAGAAACCCAAAGCACATATGTTTTTGTTTTTGTTTTTGTTTTTAATCGAATGAATGAATGGTGGTAAAGTCTAAAGAGATTCAAACCAAAATGTTAGTAGCCTCTACTGCCCCCTTCACATCCACACAAACTTCAAACACAACCAACTCTCCTTTTCCAATTTCTACACTCTTCTTCCTCCATTTCCATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGGATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTCTCATTTCCTTTTCTACTTTACATTTATCAGTCTTCTGGTTGCTCTAATTTGTGGGTTATCAAACACTTTTGTTCATTCTTCCCTTAAACTCTTTCAATTTTTTTCATGTAGTTTTAAGTTCGCAACGATTTATAGTCTTTCAATATGGTTAAGTTATAAGCATTTTTTATGAACTTTTTCATATCTTTGAACTTTTGAAAGTATATTATCGTTATTAACAGGTTTCTTAAACCTTCATATTTGTGGTCTTTAGTATACTCATCAACTTTTTTACATAAAATTGACAGTTGATGGACGTATTAGATACATATATGAAAGTCTAAAGACTTATTTTAATGTTCAGTGACTTATTTGACAAAAATTTAGAAGTCCAAGGACAATTTGTAGCCTAACCTTTAAAATTTGTACATAGAAGAAAACAGATGCCTTGTATACTGCTCTCGTTGCCCTTTCTGTTTTGCTAGCGCAGGAATCTCTTGTGCTAAACATACAAAAATGTTAAGTTATTGAATAAATAGATATCCAGCAAATTTCATTTTGACCACTGAATGCTTTTGAACTGCTTTCCTTTTTATCTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTAAATGCTGCTTGATATTCCTCTTTTAAGTTTTAACCTAACTAAAGATGATGATGAAGAGCTACAAAAGAAACAAATGGCTTCTACCTCAAACAGTTTCTTCATCAGATTAGAGAAACTAATGAAACTTGATCAACCACTTAAACTAATAAGATATTAGACTGGATTGTTAGGCTGGTGCTTTGAGTGGTTTTCAGTCTCCACACTGAAGGATGACTTAATTGGTGACCATCCACTTAGAATTTTAAAATTGAACGAGTTTCTTGACAGTTAAAAGGAAACCAACAATTATCTTTGGAATTTGTGTTGGGACACATCCTTGTTGACTAGAGGAGTAGAGTGATGCCTGTATCTATAAACATGGTAAAGAAAGATCCAATGATATCTATTTCCGATTAATTTCTCTGCCTGGAAATGAAAATTGTCATTCTAATTGGACATCTCCGTGCAAGTTAATTTCATGTTCATTTTGATTAAAGAAAGACATGAACAATGGACATGATACAATTTGCTTTTGTGTTGCAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGGTGCATTTCCCCAAAACTTTATGCTTCTTGTTCAGCTTTCCATTTCAAAGAAACTATACTGCCACCTCTCACTCTTCTGAGTCCTGACTTTGTTATTATTCTGTGAAGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGTAAGAGCCTACGAAGTACACCTTGTTTATATAGGGTTAAAATCATATAAGATATCAATCGTGATCCATTAGAACTAAAGAAAGCATTTTTCTTTGGTTTAGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGATGAAGTTGTTTTGAAACTAGTTGGAGTAGTATGCATATACATTTTGATTTACAGGACAAATAGATGGTCAAAGCCTTAAGGTTTTTGTTTGATTGATCGGCTTTGCACTATCATATGTTTATACTTCTGCTTGATGGCGAATACATGACCTTGATATATCGAGTCGTAGTTGTATTGATCATGAGAGAATTGATATCGTCGTGTAAAGTAATTGAAATTGAAGGGTTGATGAAAATATATAATTTTCAGGCCAGTGATATATAAGAACAATGTTTGAGAGTTGTAATTACAATGCAGACCTAGGAA AACATTTTTGTGGTATGATTAAAATTTAAAACATGAAGAAACCCAAAGCACATATGTTTTTGTTTTTGTTTTTGTTTTTAATCGAATGAATGAATGGTGGTAAAGTCTAAAGAGATTCAAACCAAAATGTTAGTAGCCTCTACTGCCCCCTTCACATCCACACAAACTTCAAACACAACCAACTCTCCTTTTCCAATTTCTACACTCTTCTTCCTCCATTTCCATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGGATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGATGAAGTTGTTTTGAAACTAGTTGGAGTAGTATGCATATACATTTTGATTTACAGGACAAATAGATGGTCAAAGCCTTAAGGTTTTTGTTTGATTGATCGGCTTTGCACTATCATATGTTTATACTTCTGCTTGATGGCGAATACATGACCTTGATATATCGAGTCGTAGTTGTATTGATCATGAGAGAATTGATATCGTCGTGTAAAGTAATTGAAATTGAAGGGTTGATGAAAATATATAATTTTCAGGCCAGTGATATATAAGAACAATGTTTGAGAGTTGTAATTACAATGCAGACCTAGGAA ATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGA MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLVSGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV
BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_008461486.1 (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 548.1 bits (1411), Expect = 1.6e-152 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_004139653.1 (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis sativus] >KGN44513.1 hypothetical protein Csa_7G322590 [Cucumis sativus]) HSP 1 Score: 508.1 bits (1307), Expect = 1.9e-140 Identity = 251/268 (93.66%), Postives = 257/268 (95.90%), Query Frame = 0
BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_022154428.1 (psbP domain-containing protein 4, chloroplastic [Momordica charantia]) HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117 Identity = 216/265 (81.51%), Postives = 230/265 (86.79%), Query Frame = 0
BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_022975015.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114 Identity = 216/268 (80.60%), Postives = 233/268 (86.94%), Query Frame = 0
BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_022936523.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita moschata]) HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113 Identity = 214/268 (79.85%), Postives = 233/268 (86.94%), Query Frame = 0
BLAST of MELO3C023682.2 vs. TAIR10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) HSP 1 Score: 356.3 bits (913), Expect = 1.7e-98 Identity = 178/245 (72.65%), Postives = 201/245 (82.04%), Query Frame = 0
BLAST of MELO3C023682.2 vs. TAIR10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17 Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0
BLAST of MELO3C023682.2 vs. Swiss-Prot
Match: sp|O49292|PPD4_ARATH (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2) HSP 1 Score: 356.3 bits (913), Expect = 3.0e-97 Identity = 178/245 (72.65%), Postives = 201/245 (82.04%), Query Frame = 0
BLAST of MELO3C023682.2 vs. Swiss-Prot
Match: sp|Q9LXX5|PPD6_ARATH (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16 Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0
BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A1S3CEV2|A0A1S3CEV2_CUCME (psbP domain-containing protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500071 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 1.1e-152 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A0A0K501|A0A0A0K501_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 1.2e-140 Identity = 251/268 (93.66%), Postives = 257/268 (95.90%), Query Frame = 0
BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A2N9FXQ6|A0A2N9FXQ6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19807 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 4.2e-104 Identity = 199/274 (72.63%), Postives = 218/274 (79.56%), Query Frame = 0
BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A2I4G7M4|A0A2I4G7M4_9ROSI (psbP domain-containing protein 4, chloroplastic OS=Juglans regia OX=51240 GN=LOC109005408 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 4.2e-104 Identity = 198/274 (72.26%), Postives = 220/274 (80.29%), Query Frame = 0
BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|B9SJK7|B9SJK7_RICCO (Thylakoid lumenal 29.8 kDa protein, chloroplast, putative OS=Ricinus communis OX=3988 GN=RCOM_0138880 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 4.2e-104 Identity = 199/271 (73.43%), Postives = 218/271 (80.44%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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