MELO3C023682.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C023682.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPhotosystem II reaction center PsbP family protein
Locationchr01 : 7037443 .. 7040188 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACATTTTTGTGGTATGATTAAAATTTAAAACATGAAGAAACCCAAAGCACATATGTTTTTGTTTTTGTTTTTGTTTTTAATCGAATGAATGAATGGTGGTAAAGTCTAAAGAGATTCAAACCAAAATGTTAGTAGCCTCTACTGCCCCCTTCACATCCACACAAACTTCAAACACAACCAACTCTCCTTTTCCAATTTCTACACTCTTCTTCCTCCATTTCCATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGGATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTCTCATTTCCTTTTCTACTTTACATTTATCAGTCTTCTGGTTGCTCTAATTTGTGGGTTATCAAACACTTTTGTTCATTCTTCCCTTAAACTCTTTCAATTTTTTTCATGTAGTTTTAAGTTCGCAACGATTTATAGTCTTTCAATATGGTTAAGTTATAAGCATTTTTTATGAACTTTTTCATATCTTTGAACTTTTGAAAGTATATTATCGTTATTAACAGGTTTCTTAAACCTTCATATTTGTGGTCTTTAGTATACTCATCAACTTTTTTACATAAAATTGACAGTTGATGGACGTATTAGATACATATATGAAAGTCTAAAGACTTATTTTAATGTTCAGTGACTTATTTGACAAAAATTTAGAAGTCCAAGGACAATTTGTAGCCTAACCTTTAAAATTTGTACATAGAAGAAAACAGATGCCTTGTATACTGCTCTCGTTGCCCTTTCTGTTTTGCTAGCGCAGGAATCTCTTGTGCTAAACATACAAAAATGTTAAGTTATTGAATAAATAGATATCCAGCAAATTTCATTTTGACCACTGAATGCTTTTGAACTGCTTTCCTTTTTATCTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTAAATGCTGCTTGATATTCCTCTTTTAAGTTTTAACCTAACTAAAGATGATGATGAAGAGCTACAAAAGAAACAAATGGCTTCTACCTCAAACAGTTTCTTCATCAGATTAGAGAAACTAATGAAACTTGATCAACCACTTAAACTAATAAGATATTAGACTGGATTGTTAGGCTGGTGCTTTGAGTGGTTTTCAGTCTCCACACTGAAGGATGACTTAATTGGTGACCATCCACTTAGAATTTTAAAATTGAACGAGTTTCTTGACAGTTAAAAGGAAACCAACAATTATCTTTGGAATTTGTGTTGGGACACATCCTTGTTGACTAGAGGAGTAGAGTGATGCCTGTATCTATAAACATGGTAAAGAAAGATCCAATGATATCTATTTCCGATTAATTTCTCTGCCTGGAAATGAAAATTGTCATTCTAATTGGACATCTCCGTGCAAGTTAATTTCATGTTCATTTTGATTAAAGAAAGACATGAACAATGGACATGATACAATTTGCTTTTGTGTTGCAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGGTGCATTTCCCCAAAACTTTATGCTTCTTGTTCAGCTTTCCATTTCAAAGAAACTATACTGCCACCTCTCACTCTTCTGAGTCCTGACTTTGTTATTATTCTGTGAAGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGTAAGAGCCTACGAAGTACACCTTGTTTATATAGGGTTAAAATCATATAAGATATCAATCGTGATCCATTAGAACTAAAGAAAGCATTTTTCTTTGGTTTAGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGATGAAGTTGTTTTGAAACTAGTTGGAGTAGTATGCATATACATTTTGATTTACAGGACAAATAGATGGTCAAAGCCTTAAGGTTTTTGTTTGATTGATCGGCTTTGCACTATCATATGTTTATACTTCTGCTTGATGGCGAATACATGACCTTGATATATCGAGTCGTAGTTGTATTGATCATGAGAGAATTGATATCGTCGTGTAAAGTAATTGAAATTGAAGGGTTGATGAAAATATATAATTTTCAGGCCAGTGATATATAAGAACAATGTTTGAGAGTTGTAATTACAATGCAGACCTAGGAA

mRNA sequence

AACATTTTTGTGGTATGATTAAAATTTAAAACATGAAGAAACCCAAAGCACATATGTTTTTGTTTTTGTTTTTGTTTTTAATCGAATGAATGAATGGTGGTAAAGTCTAAAGAGATTCAAACCAAAATGTTAGTAGCCTCTACTGCCCCCTTCACATCCACACAAACTTCAAACACAACCAACTCTCCTTTTCCAATTTCTACACTCTTCTTCCTCCATTTCCATTCTCCAATTCGTCTCCAGAAATCATCGTTTCTGGTTTCGGATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGATGAAGTTGTTTTGAAACTAGTTGGAGTAGTATGCATATACATTTTGATTTACAGGACAAATAGATGGTCAAAGCCTTAAGGTTTTTGTTTGATTGATCGGCTTTGCACTATCATATGTTTATACTTCTGCTTGATGGCGAATACATGACCTTGATATATCGAGTCGTAGTTGTATTGATCATGAGAGAATTGATATCGTCGTGTAAAGTAATTGAAATTGAAGGGTTGATGAAAATATATAATTTTCAGGCCAGTGATATATAAGAACAATGTTTGAGAGTTGTAATTACAATGCAGACCTAGGAA

Coding sequence (CDS)

ATGGGAACCACCGCATTGTTTATCACTAACCCATTCTCCTCCATCTTTCACCAACAAAACCTTCCTTCTCCCCTTCTCCATCCTCACCGTTTTCTCCCTAAACGGGTCTCCGCCCTCCACTGTGCCCACAACCAAAACCCCATCTCATCTCCCGCTTTGATTCGGAGATGGGTTTTGGTTTCCGGTGTTTCTTTGCTTTCTTCGGCGGCTTTGGGATTGCAAAACGAGTGTTTGGCTGCGGTTAAGCAAGGCCTTCTTGCTGGCAGAATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCTGATGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCGCAAGACTGGGAAGAGGTTCCGGTGTCAATTGCTGATCTTGGTGGGACAGAGATTGATCTCAGGTTCGGAAGCTTGAAGGAAGGTCGACTGTTTGTAATCGTTGCGCCTGTTCGTCGATTTTCCGATGTTATCGGCGAGGACGCAACCATTGAAATGGTTGGACCTCCAGAAAAAGTAATCAATGCATTCGGGCCTGAAGTTATAGGAGAAAACGTAGAAGGAAAGGTGATCAGCATGAGCGTGGCGGAGTATTCTGGAAGAACGTATTATCAGTTTGAATTGGAGCCTCCTCATGTTATAATCACAGCGACAGCAGCGGGAAATCGTCTGTACCTATTCAATGTAACAGCAAATGGCCTCCAGTGGAAGAGACATTACAAAGACTTGAAAAGGATTGCAGATTCGTTTCGCGTCGTGTGA

Protein sequence

MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLVSGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV
BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_008461486.1 (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 548.1 bits (1411), Expect = 1.6e-152
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0

Query: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60
           MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV
Sbjct: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60

Query: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240
           MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 269
           LFNVTANGLQWKRHYKDLKRIADSFRVV
Sbjct: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 268

BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_004139653.1 (PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis sativus] >KGN44513.1 hypothetical protein Csa_7G322590 [Cucumis sativus])

HSP 1 Score: 508.1 bits (1307), Expect = 1.9e-140
Identity = 251/268 (93.66%), Postives = 257/268 (95.90%), Query Frame = 0

Query: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60
           MGTT LFITNPFSSIFH Q LPSP L PH FLPKRVSA+H AHNQNPISS AL RRW LV
Sbjct: 1   MGTT-LFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHGAHNQNPISSTALNRRWALV 60

Query: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSLLSSAALGLQN+CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGR+FV+VAPVRRFSDVIGEDATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRVFVVVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240
           MVGPPEKVINAFGPEVIGENVEGKVISMSVAE+SGRTYYQFELEPPHVIITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 269
           LFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 241 LFNVTANGLQWKRHYNDLKRIADSFRIV 267

BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_022154428.1 (psbP domain-containing protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117
Identity = 216/265 (81.51%), Postives = 230/265 (86.79%), Query Frame = 0

Query: 4   TALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLVSGV 63
           T+LF +  FS  FH   LPSP+LHP         ++    NQ P+    L RR +L SG+
Sbjct: 3   TSLFTSYRFSCNFHHPKLPSPILHPQSI------SVADGENQRPLGD--LNRRSILASGI 62

Query: 64  SLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIP 123
           SLLS+A LGL + CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIP
Sbjct: 63  SLLSTAPLGLHDHCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIP 122

Query: 124 YAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVG 183
           Y FSVPQDWEEVPVSIADLGGTEIDLRFGS KEGRLFVIVAPVRRFSDVIGEDATIEMVG
Sbjct: 123 YVFSVPQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVG 182

Query: 184 PPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLYLFN 243
           PPEKVINAFGPEVIGENVEGKVI+M+VAE+SGRTYYQFELEPPHV+ITATAAGNRLYLFN
Sbjct: 183 PPEKVINAFGPEVIGENVEGKVINMNVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFN 242

Query: 244 VTANGLQWKRHYKDLKRIADSFRVV 269
           VTANGLQWKRHY DLKRIADSFRVV
Sbjct: 243 VTANGLQWKRHYGDLKRIADSFRVV 259

BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_022975015.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 216/268 (80.60%), Postives = 233/268 (86.94%), Query Frame = 0

Query: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60
           MG+T +F T PFS  FHQ   PS +L       K V A+     +    SP L RR VL+
Sbjct: 1   MGST-MFATVPFSCNFHQSKPPSQILQ------KGVPAV---GGEKENRSPILNRRSVLL 60

Query: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSL+SSA LGLQ+ECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPV+RFSDVIG+DATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIE 180

Query: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240
           MVGPPEKVI+AFGPEVIGENVEGKV++MSVAE++GRTYYQFELEPPHV+ITATAAGNRLY
Sbjct: 181 MVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLY 240

Query: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 269
           LF+VT NGLQWKRHY DLKRIADSFRVV
Sbjct: 241 LFSVTGNGLQWKRHYSDLKRIADSFRVV 258

BLAST of MELO3C023682.2 vs. NCBI nr
Match: XP_022936523.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 214/268 (79.85%), Postives = 233/268 (86.94%), Query Frame = 0

Query: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60
           MG+T +F + PFS  FHQ   PS +L       K V A+     +    SP L RR VL+
Sbjct: 1   MGST-MFASVPFSCNFHQSKPPSHILQ------KGVPAV---GGEKDNRSPILNRRSVLL 60

Query: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSL+SSA LGLQ+ECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPV+RFSDVIG+DATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIE 180

Query: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240
           MVGPPEKVI+AFGPEVIGENVEGKV++MSVAE++GRTYYQFELEPPHV+ITATAAGNRLY
Sbjct: 181 MVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLY 240

Query: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 269
           LF+VT NGLQWKRH+ DLKRIADSFRVV
Sbjct: 241 LFSVTGNGLQWKRHFSDLKRIADSFRVV 258

BLAST of MELO3C023682.2 vs. TAIR10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 356.3 bits (913), Expect = 1.7e-98
Identity = 178/245 (72.65%), Postives = 201/245 (82.04%), Query Frame = 0

Query: 34  KRVSALHCAHNQNPISSP----------ALIRRWVLVSGVSLLSSAALGLQNECLAAVKQ 93
           K++SA   ++++ P +SP           L RR V+ SG+ + S+ AL    E LA VKQ
Sbjct: 17  KKISAHQRSNSEIPKTSPGGCEDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQ 76

Query: 94  GLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLG 153
           GLLAGR+PGLSEPDE+GWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLG
Sbjct: 77  GLLAGRVPGLSEPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLG 136

Query: 154 GTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEG 213
           GTEIDLRF S KEGRL VIVAPV RF+D +G+D  IE +G P KVINAFGPEVIGENVEG
Sbjct: 137 GTEIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEG 196

Query: 214 KVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIAD 269
           KV+S +VAE+ GR YYQFELEPPHV+ITATAAGNRLYLF+VT NGLQWKRHYKDLKRIA 
Sbjct: 197 KVLSSNVAEHDGRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIAS 256

BLAST of MELO3C023682.2 vs. TAIR10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0

Query: 123 PYAFSVPQDWEEVPVSIADLGG--------TEIDLRFGSLKEGRLFVIVAPVRRFSDVIG 182
           PY F +P +W+++ ++    G           I+++F + K+G++ V+ +P+ R ++   
Sbjct: 105 PYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTN--K 164

Query: 183 EDATIEMVGPPEKVINAFGPEVIGENVEG-KVISMSVAEYSGRTYYQFELEPP------H 242
            +ATIE +G PEKVI + GP V G + +  +++  S+ +   +TYY++ LE P      H
Sbjct: 165 PNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSH 224

Query: 243 VIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRV 268
            +  ATA G+ + LF V+A   QW+   K L+ I DSF++
Sbjct: 225 NLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

BLAST of MELO3C023682.2 vs. Swiss-Prot
Match: sp|O49292|PPD4_ARATH (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 3.0e-97
Identity = 178/245 (72.65%), Postives = 201/245 (82.04%), Query Frame = 0

Query: 34  KRVSALHCAHNQNPISSP----------ALIRRWVLVSGVSLLSSAALGLQNECLAAVKQ 93
           K++SA   ++++ P +SP           L RR V+ SG+ + S+ AL    E LA VKQ
Sbjct: 17  KKISAHQRSNSEIPKTSPGGCEDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQ 76

Query: 94  GLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLG 153
           GLLAGR+PGLSEPDE+GWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLG
Sbjct: 77  GLLAGRVPGLSEPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLG 136

Query: 154 GTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVINAFGPEVIGENVEG 213
           GTEIDLRF S KEGRL VIVAPV RF+D +G+D  IE +G P KVINAFGPEVIGENVEG
Sbjct: 137 GTEIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEG 196

Query: 214 KVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIAD 269
           KV+S +VAE+ GR YYQFELEPPHV+ITATAAGNRLYLF+VT NGLQWKRHYKDLKRIA 
Sbjct: 197 KVLSSNVAEHDGRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIAS 256

BLAST of MELO3C023682.2 vs. Swiss-Prot
Match: sp|Q9LXX5|PPD6_ARATH (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16
Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0

Query: 123 PYAFSVPQDWEEVPVSIADLGG--------TEIDLRFGSLKEGRLFVIVAPVRRFSDVIG 182
           PY F +P +W+++ ++    G           I+++F + K+G++ V+ +P+ R ++   
Sbjct: 105 PYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTN--K 164

Query: 183 EDATIEMVGPPEKVINAFGPEVIGENVEG-KVISMSVAEYSGRTYYQFELEPP------H 242
            +ATIE +G PEKVI + GP V G + +  +++  S+ +   +TYY++ LE P      H
Sbjct: 165 PNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSH 224

Query: 243 VIITATAAGNRLYLFNVTANGLQWKRHYKDLKRIADSFRV 268
            +  ATA G+ + LF V+A   QW+   K L+ I DSF++
Sbjct: 225 NLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A1S3CEV2|A0A1S3CEV2_CUCME (psbP domain-containing protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500071 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 1.1e-152
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0

Query: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60
           MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV
Sbjct: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60

Query: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240
           MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 269
           LFNVTANGLQWKRHYKDLKRIADSFRVV
Sbjct: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 268

BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A0A0K501|A0A0A0K501_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.2e-140
Identity = 251/268 (93.66%), Postives = 257/268 (95.90%), Query Frame = 0

Query: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSPALIRRWVLV 60
           MGTT LFITNPFSSIFH Q LPSP L PH FLPKRVSA+H AHNQNPISS AL RRW LV
Sbjct: 1   MGTT-LFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHGAHNQNPISSTALNRRWALV 60

Query: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSLLSSAALGLQN+CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGR+FV+VAPVRRFSDVIGEDATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRVFVVVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240
           MVGPPEKVINAFGPEVIGENVEGKVISMSVAE+SGRTYYQFELEPPHVIITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 269
           LFNVTANGLQWKRHY DLKRIADSFR+V
Sbjct: 241 LFNVTANGLQWKRHYNDLKRIADSFRIV 267

BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A2N9FXQ6|A0A2N9FXQ6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19807 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 4.2e-104
Identity = 199/274 (72.63%), Postives = 218/274 (79.56%), Query Frame = 0

Query: 4   TALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPIS---------SPALI 63
           TALF +  FS  + QQ  PS  L     L   +S      +              S  + 
Sbjct: 3   TALFTSCSFSWRYKQQIFPSSHLLAQSSLENGISRAKVIADSGESKLVDGEIEKWSGLMK 62

Query: 64  RRWVLVSGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGH 123
           RR V VSGVSL+SSA LG   + LA VKQGLLAGRIPGLS+PDEQGWRTYRRPDEKSGGH
Sbjct: 63  RRSVFVSGVSLISSAVLGSPRDGLALVKQGLLAGRIPGLSDPDEQGWRTYRRPDEKSGGH 122

Query: 124 GVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIG 183
           GVGWSPIIPYAFSVPQ+WEEVPVSIADLGGTEIDLRFGS KEGRLFVIVAPV RFSD +G
Sbjct: 123 GVGWSPIIPYAFSVPQEWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVLRFSDDLG 182

Query: 184 EDATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATA 243
           ++A IE++GPPEKVINAFGPEVIGENVEGKVISM+V E+SGRTYYQ+ELEPPH +ITATA
Sbjct: 183 DNAKIELIGPPEKVINAFGPEVIGENVEGKVISMNVVEHSGRTYYQYELEPPHALITATA 242

Query: 244 AGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 269
           AGNRLYLFNVTANGLQWKRHY DLKRIA+SFRVV
Sbjct: 243 AGNRLYLFNVTANGLQWKRHYSDLKRIAESFRVV 276

BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|A0A2I4G7M4|A0A2I4G7M4_9ROSI (psbP domain-containing protein 4, chloroplastic OS=Juglans regia OX=51240 GN=LOC109005408 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 4.2e-104
Identity = 198/274 (72.26%), Postives = 220/274 (80.29%), Query Frame = 0

Query: 4   TALFITNPFSSIFHQQNLPSPLLHPHRFLP---KRVSALHCAHNQNPI------SSPALI 63
           T L+ +  FS  +HQQ +PS  L  H  L     R     C+     +       S  + 
Sbjct: 3   TVLYSSCSFSWRYHQQIVPSNNLLAHSSLENGISRAKVTACSGESGLVGEEVEKGSGFMK 62

Query: 64  RRWVLVSGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGH 123
           RR VLVSG SL+SSA LG   E LA VKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGH
Sbjct: 63  RRSVLVSGTSLISSAILGSAREGLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGH 122

Query: 124 GVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIG 183
           GVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRF S KEGR+FVIVAPV RF+D +G
Sbjct: 123 GVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFASSKEGRIFVIVAPVLRFADGLG 182

Query: 184 EDATIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATA 243
           E+A IE++GPPEKVI+AFGPEVIGENVEGKV+S +VAE+SGRTYYQ+ELEPPH +ITATA
Sbjct: 183 ENAKIELIGPPEKVIDAFGPEVIGENVEGKVLSTTVAEHSGRTYYQYELEPPHALITATA 242

Query: 244 AGNRLYLFNVTANGLQWKRHYKDLKRIADSFRVV 269
           AGNRLYLFNVTA+GLQWKRHY DLKRI+DSFRVV
Sbjct: 243 AGNRLYLFNVTASGLQWKRHYSDLKRISDSFRVV 276

BLAST of MELO3C023682.2 vs. TrEMBL
Match: tr|B9SJK7|B9SJK7_RICCO (Thylakoid lumenal 29.8 kDa protein, chloroplast, putative OS=Ricinus communis OX=3988 GN=RCOM_0138880 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 4.2e-104
Identity = 199/271 (73.43%), Postives = 218/271 (80.44%), Query Frame = 0

Query: 1   MGTTALFITNPFS-SIFHQQNLPSPLLHPHRFLPKRVSALHCAHNQNPISSP--ALIRRW 60
           MGTT +F +  F     HQQ +PS  L  H      VS +           P   L RR 
Sbjct: 1   MGTT-IFTSCSFPWKYHHQQMVPSSHLLGHSSQETGVSRIRATIEPREFEKPIGLLKRRS 60

Query: 61  VLVSGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVG 120
            LVSG+SL SS  LG   + LAAVKQGLLAGRIPGLSEPDEQGWRTYRRPD+KSGGHGVG
Sbjct: 61  ALVSGISLASSTILGFPGDGLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDDKSGGHGVG 120

Query: 121 WSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDA 180
           WSPIIPYAF VPQ+WEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPV RF+D +G++A
Sbjct: 121 WSPIIPYAFKVPQEWEEVPVSIADLGGTEIDLRFSSSKEGRLFVIVAPVLRFADDLGDNA 180

Query: 181 TIEMVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGN 240
           TIE +GPPEKVINAFGPEVIGENVEGKV+SM+VAE+SGR YYQFELEPPHV+ITATAAGN
Sbjct: 181 TIERIGPPEKVINAFGPEVIGENVEGKVLSMNVAEHSGRMYYQFELEPPHVLITATAAGN 240

Query: 241 RLYLFNVTANGLQWKRHYKDLKRIADSFRVV 269
           RLYLF+VT NGLQWKRHYKDLKRIA+SFRVV
Sbjct: 241 RLYLFSVTGNGLQWKRHYKDLKRIAESFRVV 270

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008461486.11.6e-152100.00PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis m... [more]
XP_004139653.11.9e-14093.66PREDICTED: psbP domain-containing protein 4, chloroplastic isoform X1 [Cucumis s... [more]
XP_022154428.12.2e-11781.51psbP domain-containing protein 4, chloroplastic [Momordica charantia][more]
XP_022975015.12.3e-11480.60psbP domain-containing protein 4, chloroplastic [Cucurbita maxima][more]
XP_022936523.12.5e-11379.85psbP domain-containing protein 4, chloroplastic [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G77090.11.7e-9872.65Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein[more]
AT3G56650.11.4e-1731.88Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein[more]
Match NameE-valueIdentityDescription
sp|O49292|PPD4_ARATH3.0e-9772.65PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9LXX5|PPD6_ARATH2.6e-1631.88PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3CEV2|A0A1S3CEV2_CUCME1.1e-152100.00psbP domain-containing protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=36... [more]
tr|A0A0A0K501|A0A0A0K501_CUCSA1.2e-14093.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1[more]
tr|A0A2N9FXQ6|A0A2N9FXQ6_FAGSY4.2e-10472.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19807 PE=4 SV=1[more]
tr|A0A2I4G7M4|A0A2I4G7M4_9ROSI4.2e-10472.26psbP domain-containing protein 4, chloroplastic OS=Juglans regia OX=51240 GN=LOC... [more]
tr|B9SJK7|B9SJK7_RICCO4.2e-10473.43Thylakoid lumenal 29.8 kDa protein, chloroplast, putative OS=Ricinus communis OX... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009654photosystem II oxygen evolving complex
GO:0009523photosystem II
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP
IPR016123Mog1/PsbP_a/b/a-sand
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0019252 starch biosynthetic process
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0031977 thylakoid lumen
molecular_function GO:0005509 calcium ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023682.2.1MELO3C023682.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3DG3DSA:3.40.1000.10coord: 121..268
e-value: 3.0E-16
score: 61.4
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILYSSF55724Mog1p/PsbP-likecoord: 116..267
IPR002683PsbP familyPFAMPF01789PsbPcoord: 124..267
e-value: 2.4E-12
score: 47.1
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 43..268
NoneNo IPR availablePANTHERPTHR31407:SF18PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTICcoord: 43..268