MELO3C023497 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023497
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Non-specific lipid-transfer protein
Location	chr1 : 32720748 .. 32722057 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCAAGTTCAAACCCACCCTCCATAAGGTGTTCCAAAAGCACATTTCCCATACAGCTAGGGCCATGGCAACCATTCCAAAGCTTGGAGCTATACTATTGTTTGTATTTTTGCTTCTTGGAGTCTCAAAGGCTACAATCTCATGCAGTGATGTGACGAAGGATTTGATGCCATGTGTGAGTTATCTTGTGAGTGGTAGTGGGAAACCACCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCTTCAGCAGCCACAAGTGGTGCTGACAAGAAGGCTGCATGTCAATGCATTAAGTCAGCTGCTAGTAATGTGAATTACAACGCTAAATTGGCTCAAGATCTTCCTTCCAATTGTGGCATTACTCTGCCTTTTAGCATCTCTGCTGGCATTGATTGTTCAAAGTATGAATATTTACTCTAAAATATGATTTAAAATATTCGTTATCGTTTTCTCGAGTATATATGGTTGTCTAGGTTTGTTATATATTCATGTTTCAACGTACTCTAATGCTTAAGTCAATATAAGTCAAAGTAGTGTAGGATACCTTATATTAGATCAGGGTTTTGCCGTATTAGTGGGGAGCGCCTAATAACCTATTAGTTGATTTAGGATTTCTTTGCCTCTTTTCTTTATGGTGAAGTCGTCTCGACTTTTTTTTAGTTCCATTGACAAATCTATCTCTTTTTCCTCTTTTGAGATTTATATTCATGTGATTTGGGGCCCTTGAATTTCAACTCTTATAACCATCGATCATTCCTCGATTTACAAAATTTAAACTTCAAACTATTTTTAAATTAGTTCTCGTATATATATATATACATACATGTAGTTTCTTCCTTAACGTTGACTTGAACAAACTAATGCTAATTGGGTTTTTTTTTTAATTTTCAGGATTAATTGATGATTATGAGAGAGGATTTGATCAGAAGGGACCAGAAATGACAGAATTCTACATATAAAGTTTGGAGAAAAGTATTACATCCTAATTATTATTATATTATAATTATATATTACTATATATATATAATGCAATAAAATAAAACTATAGCTGGAATGGAATCTAATCCCATGGATGTTTAGATTCCTTTGTATTGTTTTTAATTTATACCATGTCTTGCAGTGTGCCTTTTATTTTTGTTACTTATAAAAAAAATGCATTATATCCTCTTTCCTTATTAAACTTTTTCATTACTATTTTCTTGTGGATATGGAATAATTTCATTTTATCTTAAATGTTGTTTACGTTAAAATACTTTCTCTAAACAAAGTTTATATATATATATATATATTGGCCAATACTTATCCTTT

mRNA sequence

AACTCAAGTTCAAACCCACCCTCCATAAGGTGTTCCAAAAGCACATTTCCCATACAGCTAGGGCCATGGCAACCATTCCAAAGCTTGGAGCTATACTATTGTTTGTATTTTTGCTTCTTGGAGTCTCAAAGGCTACAATCTCATGCAGTGATGTGACGAAGGATTTGATGCCATGTGTGAGTTATCTTGTGAGTGGTAGTGGGAAACCACCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCTTCAGCAGCCACAAGTGGTGCTGACAAGAAGGCTGCATGTCAATGCATTAAGTCAGCTGCTAGTAATGTGAATTACAACGCTAAATTGGCTCAAGATCTTCCTTCCAATTGTGGCATTACTCTGCCTTTTAGCATCTCTGCTGGCATTGATTGTTCAAAGATTAATTGATGATTATGAGAGAGGATTTGATCAGAAGGGACCAGAAATGACAGAATTCTACATATAAAGTTTGGAGAAAAGTATTACATCCTAATTATTATTATATTATAATTATATATTACTATATATATATAATGCAATAAAATAAAACTATAGCTGGAATGGAATCTAATCCCATGGATGTTTAGATTCCTTTGTATTGTTTTTAATTTATACCATGTCTTGCAGTGTGCCTTTTATTTTTGTTACTTATAAAAAAAATGCATTATATCCTCTTTCCTTATTAAACTTTTTCATTACTATTTTCTTGTGGATATGGAATAATTTCATTTTATCTTAAATGTTGTTTACGTTAAAATACTTTCTCTAAACAAAGTTTATATATATATATATATATTGGCCAATACTTATCCTTT

Coding sequence (CDS)

ATGGCAACCATTCCAAAGCTTGGAGCTATACTATTGTTTGTATTTTTGCTTCTTGGAGTCTCAAAGGCTACAATCTCATGCAGTGATGTGACGAAGGATTTGATGCCATGTGTGAGTTATCTTGTGAGTGGTAGTGGGAAACCACCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCTTCAGCAGCCACAAGTGGTGCTGACAAGAAGGCTGCATGTCAATGCATTAAGTCAGCTGCTAGTAATGTGAATTACAACGCTAAATTGGCTCAAGATCTTCCTTCCAATTGTGGCATTACTCTGCCTTTTAGCATCTCTGCTGGCATTGATTGTTCAAAGATTAATTGA

Protein sequence

MATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN*

Homology

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BLAST of MELO3C023497 vs. Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-27
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 11  LLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGADKK 70
           +L +F +   S++ ISCS V +DL PCVSYL SGSG PP  CCDG K+L++A T+ ADKK
Sbjct: 12  VLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKK 71

Query: 71  AACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           AACQCIKS A++V    +LAQ L SNCG +LP   S  +DC+ +
Sbjct: 72  AACQCIKSVANSVTVKPELAQALASNCGASLPVDASPTVDCTTV 115

[Close]

BLAST of MELO3C023497 vs. Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.1e-24
Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 1


Query: 2   ATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSS 61
           A   +L  + L   +LL  + A ISC  V+  L PC+SY      KPP+ACC G K L+ 
Sbjct: 4   AAASQLVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAG 63

Query: 62  AATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           AA S ADK+AAC+CIKSAA  +  NA  A  +PS CG+++P++ISA +DCSKI
Sbjct: 64  AAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSKI 114

[Close]

BLAST of MELO3C023497 vs. Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-23
Identity = 54/113 (47.79%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 2   ATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSS 61
           A   +L  + +   +LL  + A ISC  V+  L PC+SY      KPP ACC G K L+ 
Sbjct: 4   AAATQLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAG 63

Query: 62  AATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           AA S ADK+AAC+CIKSAA  +  NA  A  +PS CG+++P++ISA +DCSKI
Sbjct: 64  AAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSKI 114

[Close]

BLAST of MELO3C023497 vs. Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-23
Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 2   ATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSS 61
           A   +L  + +   +L+  + A ISC  V+  L PC+SY      KPP ACC G K L+ 
Sbjct: 4   AAATQLVLVAMVAAMLIVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAG 63

Query: 62  AATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           AA S ADK+AAC+CIKSAA  +  NA  A  +PS CG+++P++ISA +DCSKI
Sbjct: 64  AAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSKI 114

[Close]

BLAST of MELO3C023497 vs. Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.6e-21
Identity = 48/109 (44.04%), Postives = 70/109 (64.22%), Query Frame = 1


Query: 9   AILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSA-CCDGAKALSSAATSGA 68
           A++  V L    S+A ISC  V   + PC+SY   G G  PSA CC G ++L++AA + A
Sbjct: 13  AVVALVLLAAATSEAAISCGQVASAIAPCISY-ARGQGSGPSAGCCSGVRSLNNAARTTA 72

Query: 69  DKKAACQCIKSAASNVN-YNAKLAQDLPSNCGITLPFSISAGIDCSKIN 116
           D++AAC C+K+AA+ V+  NA  A  +PS CG+++P++IS   DCS++N
Sbjct: 73  DRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN 120

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BLAST of MELO3C023497 vs. TrEMBL
Match: A0A0A0K657_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_7G430200 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-53
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 1


Query: 2   ATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSS 61
           A IPKLGA+LLFVFLLL VSKATISCSDVTKDLMPCVSYL+SGSGKPPSACCDGAKALSS
Sbjct: 6   AAIPKLGAVLLFVFLLLQVSKATISCSDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSS 65

Query: 62  AATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN 116
           AATS ADKKAAC+CIKSAASNVNYN KLAQDLPSNCGI+LPFSISAGIDCSKIN
Sbjct: 66  AATSSADKKAACECIKSAASNVNYNVKLAQDLPSNCGISLPFSISAGIDCSKIN 119

[Close]

BLAST of MELO3C023497 vs. TrEMBL
Match: I1MJG4_SOYBN (Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_15G265900 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.9e-34
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 7   LGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSG 66
           L  ++L + LL   S+A ISCSDV KDL PCVSYLVSGSG+PP+ACC GAKAL+SAAT+ 
Sbjct: 7   LATLVLLILLLASTSEAAISCSDVIKDLRPCVSYLVSGSGQPPAACCSGAKALASAATTS 66

Query: 67  ADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
            DKKAAC CIKS + ++N N++LAQ LP NCGITLP +IS   DCSK+
Sbjct: 67  EDKKAACNCIKSTSKSININSQLAQALPGNCGITLPVAISPNADCSKV 114

[Close]

BLAST of MELO3C023497 vs. TrEMBL
Match: M5XL89_PRUPE (Non-specific lipid-transfer protein OS=Prunus persica GN=PRUPE_ppa013464mg PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.9e-34
Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 1


Query: 4   IPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAA 63
           IP   A++  + LL  VS+AT+SCSDVTKDL PC+SYLV+GSGKPP+ACC GA AL+SAA
Sbjct: 10  IPTTAALIGCLLLLATVSEATLSCSDVTKDLRPCLSYLVNGSGKPPAACCAGASALASAA 69

Query: 64  TSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           ++ ADKKAAC CIKSAA  +N   +LAQ LP NCGI LPF+IS   DCSK+
Sbjct: 70  STSADKKAACGCIKSAAQKINLKVQLAQALPGNCGINLPFTISPNTDCSKV 120

[Close]

BLAST of MELO3C023497 vs. TrEMBL
Match: A0A0B2QNS7_GLYSO (Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_026558 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-33
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 7   LGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSG 66
           L  ++L + LL   S+A ISCSDV KDL PCVSYLVSGSG+PP+ACC GAKAL+SAAT+ 
Sbjct: 31  LATLVLLILLLATTSEAAISCSDVIKDLRPCVSYLVSGSGQPPAACCSGAKALASAATTS 90

Query: 67  ADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
            DKKAAC CIKS + ++N N++LAQ LP NCGITLP +IS   DCSK+
Sbjct: 91  EDKKAACNCIKSTSKSININSQLAQALPGNCGITLPVAISPNADCSKV 138

[Close]

BLAST of MELO3C023497 vs. TrEMBL
Match: I1KTU5_SOYBN (Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_08G161700 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-33
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 7   LGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSG 66
           L  ++L + LL   S+A ISCSDV KDL PCVSYLVSGSG+PP+ACC GAKAL+SAAT+ 
Sbjct: 31  LATLVLLILLLATTSEAAISCSDVIKDLRPCVSYLVSGSGQPPAACCSGAKALASAATTS 90

Query: 67  ADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
            DKKAAC CIKS + ++N N++LAQ LP NCGITLP +IS   DCSK+
Sbjct: 91  EDKKAACNCIKSTSKSININSQLAQALPGNCGITLPVAISPNADCSKV 138

[Close]

BLAST of MELO3C023497 vs. TAIR10
Match: AT2G18370.1 (AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 7.8e-29
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 11  LLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGADKK 70
           +L +F +   S++ ISCS V +DL PCVSYL SGSG PP  CCDG K+L++A T+ ADKK
Sbjct: 12  VLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKK 71

Query: 71  AACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           AACQCIKS A++V    +LAQ L SNCG +LP   S  +DC+ +
Sbjct: 72  AACQCIKSVANSVTVKPELAQALASNCGASLPVDASPTVDCTTV 115

[Close]

BLAST of MELO3C023497 vs. TAIR10
Match: AT5G01870.1 (AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-18
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 1


Query: 11  LLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGADKK 70
           LL   +    S+A ISC+ V  +L PCV Y+V G G  P +CC+G + LS  ATS +DK+
Sbjct: 10  LLLASIFAWGSEAAISCNAVQANLYPCVVYVVQG-GAIPYSCCNGIRMLSKQATSASDKQ 69

Query: 71  AACQCIKSAASNVNYNA---KLAQDLPSNCGITLPFSISAGIDCSKI 115
             C+CIKS    V+Y++   K A  LP  CG+ LP+ I    +C+ I
Sbjct: 70  GVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSI 115

[Close]

BLAST of MELO3C023497 vs. TAIR10
Match: AT3G08770.2 (AT3G08770.2 lipid transfer protein 6)

HSP 1 Score: 84.3 bits (207), Expect = 5.2e-17
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 1


Query: 9   AILLFVFLLLGV--SKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSG 68
           ++LL V L+L +   +A +SC+ V  DL PC+SY+  G G  P+ CC+G   L S A + 
Sbjct: 3   SLLLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQG-GPVPTLCCNGLTTLKSQAQTS 62

Query: 69  ADKKAACQCIKSAASNVNYNAKLAQ---DLPSNCGITLPFSISAGIDC 112
            D++  C+CIKSA   +  + +  Q   +LPS CG+ LP+  S   DC
Sbjct: 63  VDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDC 109

[Close]

BLAST of MELO3C023497 vs. TAIR10
Match: AT5G59320.1 (AT5G59320.1 lipid transfer protein 3)

HSP 1 Score: 83.6 bits (205), Expect = 8.9e-17
Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 1


Query: 1   MATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS 60
           MA   +    L+    ++    A ISC  V   L PC +YL  G   PPS CC G K L+
Sbjct: 1   MAFALRFFTCLVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLVPPS-CCAGVKTLN 60

Query: 61  SAATSGADKKAACQCIKSAASNVN-YNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           S A +  D++ AC+CI+S A +++  N  LA  LP  CG+++P+ IS   +C+ I
Sbjct: 61  SMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of MELO3C023497 vs. TAIR10
Match: AT2G38540.1 (AT2G38540.1 lipid transfer protein 1)

HSP 1 Score: 82.8 bits (203), Expect = 1.5e-16
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1


Query: 1   MATIPKLGAILLFVFLLLG--VSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKA 60
           MA + KL  +LL   ++ G   S A +SC  V  +L  C+ Y++ G   PP ACC G K 
Sbjct: 1   MAGVMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPP-ACCSGVKN 60

Query: 61  LSSAATSGADKKAACQCIKSAASNV--NYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           L+S A +  D++ AC CI+ AA  +    NA  A  +P  CG+ +P+ IS   +C  +
Sbjct: 61  LNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of MELO3C023497 vs. NCBI nr
Match: gi|659122587|ref|XP_008461223.1| (PREDICTED: non-specific lipid-transfer protein 8 [Cucumis melo])

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


Query: 1   MATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS 60
           MATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS
Sbjct: 1   MATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS 60

Query: 61  SAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN 116
           SAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN
Sbjct: 61  SAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN 115

[Close]

BLAST of MELO3C023497 vs. NCBI nr
Match: gi|449436232|ref|XP_004135897.1| (PREDICTED: non-specific lipid-transfer protein 8-like [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-53
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 1


Query: 2   ATIPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSS 61
           A IPKLGA+LLFVFLLL VSKATISCSDVTKDLMPCVSYL+SGSGKPPSACCDGAKALSS
Sbjct: 6   AAIPKLGAVLLFVFLLLQVSKATISCSDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSS 65

Query: 62  AATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN 116
           AATS ADKKAAC+CIKSAASNVNYN KLAQDLPSNCGI+LPFSISAGIDCSKIN
Sbjct: 66  AATSSADKKAACECIKSAASNVNYNVKLAQDLPSNCGISLPFSISAGIDCSKIN 119

[Close]

BLAST of MELO3C023497 vs. NCBI nr
Match: gi|955366595|ref|XP_003546844.2| (PREDICTED: non-specific lipid-transfer protein 8-like [Glycine max])

HSP 1 Score: 151.4 bits (381), Expect = 9.9e-34
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 7   LGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSG 66
           L  ++L + LL   S+A ISCSDV KDL PCVSYLVSGSG+PP+ACC GAKAL+SAAT+ 
Sbjct: 7   LATLVLLILLLASTSEAAISCSDVIKDLRPCVSYLVSGSGQPPAACCSGAKALASAATTS 66

Query: 67  ADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
            DKKAAC CIKS + ++N N++LAQ LP NCGITLP +IS   DCSK+
Sbjct: 67  EDKKAACNCIKSTSKSININSQLAQALPGNCGITLPVAISPNADCSKV 114

[Close]

BLAST of MELO3C023497 vs. NCBI nr
Match: gi|596011376|ref|XP_007218611.1| (hypothetical protein PRUPE_ppa013464mg [Prunus persica])

HSP 1 Score: 151.4 bits (381), Expect = 9.9e-34
Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 1


Query: 4   IPKLGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAA 63
           IP   A++  + LL  VS+AT+SCSDVTKDL PC+SYLV+GSGKPP+ACC GA AL+SAA
Sbjct: 10  IPTTAALIGCLLLLATVSEATLSCSDVTKDLRPCLSYLVNGSGKPPAACCAGASALASAA 69

Query: 64  TSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
           ++ ADKKAAC CIKSAA  +N   +LAQ LP NCGI LPF+IS   DCSK+
Sbjct: 70  STSADKKAACGCIKSAAQKINLKVQLAQALPGNCGINLPFTISPNTDCSKV 120

[Close]

BLAST of MELO3C023497 vs. NCBI nr
Match: gi|734376555|gb|KHN21357.1| (Non-specific lipid-transfer protein 8 [Glycine soja])

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-33
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 7   LGAILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSG 66
           L  ++L + LL   S+A ISCSDV KDL PCVSYLVSGSG+PP+ACC GAKAL+SAAT+ 
Sbjct: 31  LATLVLLILLLATTSEAAISCSDVIKDLRPCVSYLVSGSGQPPAACCSGAKALASAATTS 90

Query: 67  ADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKI 115
            DKKAAC CIKS + ++N N++LAQ LP NCGITLP +IS   DCSK+
Sbjct: 91  EDKKAACNCIKSTSKSININSQLAQALPGNCGITLPVAISPNADCSKV 138

The following BLAST results are available for this feature:

BLAST of MELO3C023497 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTP8_ARATH	1.4e-27	54.81	Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=3 SV=1	[more]
NLT41_HORVU	7.1e-24	48.67	Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1	[more]
NLT43_HORVU	2.7e-23	47.79	Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1	[more]
NLT42_HORVU	4.6e-23	46.90	Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1	[more]
NLTP_MAIZE	9.6e-21	44.04	Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1	[more]

BLAST of MELO3C023497 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K657_CUCSA	3.0e-53	92.98	Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_7G430200 PE=3 SV=1	[more]
I1MJG4_SOYBN	6.9e-34	64.81	Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_15G265900 PE=3 SV=1	[more]
M5XL89_PRUPE	6.9e-34	64.86	Non-specific lipid-transfer protein OS=Prunus persica GN=PRUPE_ppa013464mg PE=3 ...	[more]
A0A0B2QNS7_GLYSO	1.2e-33	64.81	Non-specific lipid-transfer protein OS=Glycine soja GN=glysoja_026558 PE=3 SV=1	[more]
I1KTU5_SOYBN	1.2e-33	64.81	Non-specific lipid-transfer protein OS=Glycine max GN=GLYMA_08G161700 PE=3 SV=1	[more]

BLAST of MELO3C023497 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18370.1	7.8e-29	54.81	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G01870.1	2.8e-18	42.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G08770.2	5.2e-17	38.89	lipid transfer protein 6	[more]
AT5G59320.1	8.9e-17	37.39	lipid transfer protein 3	[more]
AT2G38540.1	1.5e-16	36.44	lipid transfer protein 1	[more]

BLAST of MELO3C023497 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122587\|ref\|XP_008461223.1\|	1.3e-57	100.00	PREDICTED: non-specific lipid-transfer protein 8 [Cucumis melo]	[more]
gi\|449436232\|ref\|XP_004135897.1\|	4.3e-53	92.98	PREDICTED: non-specific lipid-transfer protein 8-like [Cucumis sativus]	[more]
gi\|955366595\|ref\|XP_003546844.2\|	9.9e-34	64.81	PREDICTED: non-specific lipid-transfer protein 8-like [Glycine max]	[more]
gi\|596011376\|ref\|XP_007218611.1\|	9.9e-34	64.86	hypothetical protein PRUPE_ppa013464mg [Prunus persica]	[more]
gi\|734376555\|gb\|KHN21357.1\|	1.7e-33	64.81	Non-specific lipid-transfer protein 8 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000528	Plant_LTP
IPR016140	Bifunc_inhib/LTP/seed_store

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0008289	lipid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU48830	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023497T1	MELO3C023497T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU48830	MU48830	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 26..42 score: 3.4E-23coord: 68..83 score: 3.4E-23coord: 102..113 score: 3.4E-23coord: 47..61 score: 3.4E-23coord: 84..101 score: 3.4
IPR000528	Plant lipid transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 93..114 scor
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 27..111 score: 9.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..111 score: 6.6
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 25..114 score: 1.28
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 25..115 score: 7.8
None	No IPR available	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 9..115 score: 4.0
None	No IPR available	PANTHER	PTHR33076:SF4	NON-SPECIFIC LIPID-TRANSFER PROTEIN 8	coord: 9..115 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C023497	Csa7G430200	Cucumber (Chinese Long) v2	cumeB521
MELO3C023497	Cla015292	Watermelon (97103) v1	mewmB198
MELO3C023497	ClCG09G003610	Watermelon (Charleston Gray)	mewcgB174
MELO3C023497	Cla97C09G165870	Watermelon (97103) v2	mewmbB222
MELO3C023497	Bhi09G000465	Wax gourd	mewgoB253
MELO3C023497	CSPI07G19770	Wild cucumber (PI 183967)	cpimeB525
MELO3C023497	Cucsa.049860	Cucumber (Gy14) v1	cgymeB029
MELO3C023497	CmaCh08G005670	Cucurbita maxima (Rimu)	cmameB824
MELO3C023497	CmoCh08G005600	Cucurbita moschata (Rifu)	cmomeB808
MELO3C023497	Lsi02G026320	Bottle gourd (USVL1VR-Ls)	lsimeB185
MELO3C023497	Cp4.1LG17g08390	Cucurbita pepo (Zucchini)	cpemeB299
MELO3C023497	CsGy7G018060	Cucumber (Gy14) v2	cgybmeB457
MELO3C023497	Carg13482	Silver-seed gourd	carmeB0455
MELO3C023497	CsaV3_7G031570	Cucumber (Chinese Long) v3	cucmeB537

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023497	Cucumber (Gy14) v2	cgybmeB157
MELO3C023497	Silver-seed gourd	carmeB0359
MELO3C023497	Cucurbita maxima (Rimu)	cmameB326
MELO3C023497	Cucurbita moschata (Rifu)	cmomeB318
MELO3C023497	Cucumber (Chinese Long) v2	cumeB189
MELO3C023497	Cucurbita pepo (Zucchini)	cpemeB123