MELO3C023330 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023330
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Gag-pro-like protein
Location	chr11 : 1618364 .. 1619293 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTACACAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAGTGGCTATCGTACCACAAGAGCCTCTGCAACCACCATATCCTAAGTGGTATGACCCTAATGCAAGATGTGAATATCATGCTGGGACAGTTGGGCATTCTATAGAGAATTGTTTTCCTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAAGCCGGTTGGTTGAAATTCAAGAAGACAGGAGAAGAGCTTGATGTCAACCAGAACCCTTTACCAAATCATGAGGGTCCCGCCATAAATGTTGTCGACACATTCACGGAAAGAAATAAGAATATGGTGAGCGGCGTAACTACTTCAATGAATACGCTTTTCCAAATCCTCCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATGGAGAGAAGATTGGATGCGTCAACAAGGAGGAGTGTTTATTTTACCTAGAGACAAATGACCATTCCATTGAGGATTGTTGTGAGTTCAAGAATTGGGTGCAAAAGCTGATGGATGCAAAGATTCTCTTGGTAGGACAGATAAGCATGCAGGAAATCGAAGTTAATATGATTACTGATACTTCATCTACTAAGAAAACTTCAAATGAGACAACATCTATATGGAAACCATTAGTCATTCATTATGAAGAGAAGCCAAGTATTATGTCTTATATCCAAAAACCTAAAGCAATGACAATTGAAATACCAAGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAATTCATCACGAACAATGTTGTTTCTACAACAGTTGAAGGATTAACTCGTAGTGGAAGGTGTTATACACTAGCTAATTTAAAAGATGTCTCGAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTGAGTTAA

mRNA sequence

ATGTCGTACACAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAGTGGCTATCGTACCACAAGAGCCTCTGCAACCACCATATCCTAAGTGGTATGACCCTAATGCAAGATGTGAATATCATGCTGGGACAGTTGGGCATTCTATAGAGAATTGTTTTCCTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAAGCCGGTTGGTTGAAATTCAAGAAGACAGGAGAAGAGCTTGATGTCAACCAGAACCCTTTACCAAATCATGAGGGTCCCGCCATAAATGTTGTCGACACATTCACGGAAAGAAATAAGAATATGGTGAGCGGCGTAACTACTTCAATGAATACGCTTTTCCAAATCCTCCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATGGAGAGAAGATTGGATGCGTCAACAAGGAGGAGTGTTTATTTTACCTAGAGACAAATGACCATTCCATTGAGGATTGTTGTGAGTTCAAGAATTGGGTGCAAAAGCTGATGGATGCAAAGATTCTCTTGGTAGGACAGATAAGCATGCAGGAAATCGAAGTTAATATGATTACTGATACTTCATCTACTAAGAAAACTTCAAATGAGACAACATCTATATGGAAACCATTAGTCATTCATTATGAAGAGAAGCCAAGTATTATGTCTTATATCCAAAAACCTAAAGCAATGACAATTGAAATACCAAGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAATTCATCACGAACAATGTTGTTTCTACAACAGTTGAAGGATTAACTCGTAGTGGAAGGTGTTATACACTAGCTAATTTAAAAGATGTCTCGAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTGAGTTAA

Coding sequence (CDS)

ATGTCGTACACAGAGCTTTTGCCTCAACTTTTAAAGAGTCATCAAGTGGCTATCGTACCACAAGAGCCTCTGCAACCACCATATCCTAAGTGGTATGACCCTAATGCAAGATGTGAATATCATGCTGGGACAGTTGGGCATTCTATAGAGAATTGTTTTCCTTTGAAAGCTAAAGTGCAAAGTCTAGTTAAAGCCGGTTGGTTGAAATTCAAGAAGACAGGAGAAGAGCTTGATGTCAACCAGAACCCTTTACCAAATCATGAGGGTCCCGCCATAAATGTTGTCGACACATTCACGGAAAGAAATAAGAATATGGTGAGCGGCGTAACTACTTCAATGAATACGCTTTTCCAAATCCTCCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGATGGAGAGAAGATTGGATGCGTCAACAAGGAGGAGTGTTTATTTTACCTAGAGACAAATGACCATTCCATTGAGGATTGTTGTGAGTTCAAGAATTGGGTGCAAAAGCTGATGGATGCAAAGATTCTCTTGGTAGGACAGATAAGCATGCAGGAAATCGAAGTTAATATGATTACTGATACTTCATCTACTAAGAAAACTTCAAATGAGACAACATCTATATGGAAACCATTAGTCATTCATTATGAAGAGAAGCCAAGTATTATGTCTTATATCCAAAAACCTAAAGCAATGACAATTGAAATACCAAGTCCTTTTGCTTATAAGGATAACCATGTCGTTCCATGGAAGTATGAATGTCAATTCATCACGAACAATGTTGTTTCTACAACAGTTGAAGGATTAACTCGTAGTGGAAGGTGTTATACACTAGCTAATTTAAAAGATGTCTCGAAAGAGGATGAAGTTCGACGACGTAAAGGCAAAGCTATAGAAATGGCAGGTGAAGATGATCTAAATGATCTGAGTTAA

Protein sequence

MSYTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSLVKAGWLKFKKTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHGAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQISMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPSPFAYKDNHVVPWKYECQFITNNVVSTTVEGLTRSGRCYTLANLKDVSKEDEVRRRKGKAIEMAGEDDLNDLS*

Homology

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BLAST of MELO3C023330 vs. TrEMBL
Match: A0A061ELG5_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_020601 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.0e-47
Identity = 114/290 (39.31%), Postives = 163/290 (56.21%), Query Frame = 1


Query: 3   YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
           YT LLPQL+++  +A  P EPL+PP+PKWYDPNA C+YH G  GHS ENC  LK KVQ+L
Sbjct: 355 YTTLLPQLIENRLLARTPLEPLRPPFPKWYDPNAHCDYHFGIQGHSTENCTTLKHKVQAL 414

Query: 63  VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV-DTFTERNKNMVSGVTTSMNTLFQILH 122
           +KAG L F K  +   V+ NPLPNH    +N + +    R K  +  + T M+ +F+ L 
Sbjct: 415 IKAGLLNFAKK-DNSSVDGNPLPNHGRSTVNAIHEGMIRRVKKGIDEIQTPMDKVFEALS 474

Query: 123 GAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQI 182
               ++P     D E++G      C F++    HSI++C  F+  +Q+LMD+ ++     
Sbjct: 475 KINAITP--EPIDTEELGHDLAYSCKFHMGAIGHSIQNCDSFRRKLQELMDSSVIEF--- 534

Query: 183 SMQEIEVNMI----TDTSSTKKTSNETTSIWKPLVIHYEEKPSIMS---YIQKPKAMTIE 242
             +E+E N++     DT +   +S+   +  KPL I YEE  S M+          +TIE
Sbjct: 535 -YEEVEENLVGTINGDTPTEVASSSFKGNKPKPLTIFYEENRSPMNDTFPTMIRSGITIE 594

Query: 243 IPSPFAYKDNHVVPWKYECQFITNNVVS--------TTVEGLTRSGRCYT 277
           +PSPF YK +  VPW YEC  +     S        T+V G+TRSGRCY+
Sbjct: 595 VPSPFPYKSDKAVPWNYECNILGTASSSPQASLEDLTSVGGITRSGRCYS 637

[Close]

BLAST of MELO3C023330 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.2e-46
Identity = 117/311 (37.62%), Postives = 166/311 (53.38%), Query Frame = 1


Query: 3    YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
            YT LLPQL++   +   P EPL+PP+PKWYDPNA C+YH G  GHS ENC  LK KVQ+L
Sbjct: 1059 YTTLLPQLIEKRLLTQTPLEPLRPPFPKWYDPNAHCDYHFGIQGHSTENCTALKHKVQAL 1118

Query: 63   VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV-DTFTERNKNMVSGVTTSMNTLFQILH 122
            +KAG L F K  +   V+ NPL NH  P +N + +    R K  +  + T M+ +F+ L 
Sbjct: 1119 IKAGLLNFTKK-DSSSVDGNPLLNHGRPTVNAIHEGMIRRVKKGIDEIQTPMDKVFEALS 1178

Query: 123  GAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQI 182
                ++P     D +++G      C F++    HSI++C  F+  +Q+LMD+ I+   + 
Sbjct: 1179 KINAITP--EPIDTKELGHDLAYSCKFHMGAIGHSIQNCDGFRRKLQELMDSSIIEFYEG 1238

Query: 183  SMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIM---SYIQKPKAMTIEIPSP 242
            + + +   +  DT +   +S+   +  KPL I YEE  S M   S       +TIE+PSP
Sbjct: 1239 AEENLVGTIYGDTPAEVASSSFGANKPKPLTIFYEENKSPMNDTSPTMIRNGITIEVPSP 1298

Query: 243  FAYKDNHVVPWKYECQFITNNVVS--------TTVEGLTRSGRCYTLANLKDVSKEDEVR 302
            F YK++  VPW YEC  +     +        T V G+TRSGRCY        S E   R
Sbjct: 1299 FPYKNDKAVPWNYECNILGTASSAPQASFEDITGVGGITRSGRCY--------SPEVAER 1358

[Close]

BLAST of MELO3C023330 vs. TrEMBL
Match: A0A061E6J4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44
Identity = 126/318 (39.62%), Postives = 166/318 (52.20%), Query Frame = 1


Query: 3   YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
           Y EL  QL+ +H VA +  EPL+PP+P+WYD +A C+YH G  GHSIENC   K KVQ L
Sbjct: 456 YAELFTQLVANHLVAPLYIEPLKPPFPRWYDTSAHCDYHYGIEGHSIENCTAFKHKVQGL 515

Query: 63  VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV--DTFTERNKNMVSGVTTSMNTLFQIL 122
           +KAG L F+K  E+ +VN NPLPNH G  +N +  + + +RN   +  V TSM  +F+ L
Sbjct: 516 IKAGILNFEKKPEQ-NVNNNPLPNHAGAGVNAIEREVYVKRN---IREVETSMEKVFEAL 575

Query: 123 HGAGYLS-----PRFNND-DGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMD-A 182
             A  L      P  N+  D +++ C+  + C+       HSI+ C  F+  VQ++MD +
Sbjct: 576 VKADMLKVWPECPNVNDSRDIQRLCCLYHKGCV------GHSIQGCSSFRKEVQRMMDES 635

Query: 183 KILLVGQISMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTI 242
           KI    + S  E  VNMI+      K S     I KPL I YE K  ++      K M I
Sbjct: 636 KIEFYTEAS--ESAVNMIS------KESTHPMKI-KPLTIFYEPKGELVEDKNHAK-MVI 695

Query: 243 EIPSPFAYKDNHVVPWKYECQFITNNVVS------------TTVEGLTRSGRCYT----- 294
           E+P PF YKDN  VPW Y C    +                T V G+TRSGRCY+     
Sbjct: 696 EVPKPFPYKDNKAVPWNYNCNVQVSEAKKWIAESQDDAANITGVGGITRSGRCYSPEAFE 753

[Close]

BLAST of MELO3C023330 vs. TrEMBL
Match: A0A061DPM2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_003960 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 115/315 (36.51%), Postives = 164/315 (52.06%), Query Frame = 1


Query: 3    YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
            YT LLPQL+++  +A  P EPL+P +PKWYDPNA C+YH G  GHS ENC  LK KVQ L
Sbjct: 965  YTTLLPQLIENRLLARTPLEPLRPSFPKWYDPNAHCDYHFGIQGHSTENCTALKHKVQVL 1024

Query: 63   VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV-DTFTERNKNMVSGVTTSMNTLFQILH 122
            +KAG L F K  +   V+ NPLPNH  P +N + +      K  +  + T M+ +F+ L 
Sbjct: 1025 IKAGLLNFTKK-DSSGVDGNPLPNHGRPTVNAIHEGMIRMVKKGIDEIQTPMDKVFEALS 1084

Query: 123  GAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQI 182
                ++P     D +++G      C F++    HSI++   F+  +Q+LMD+ ++   + 
Sbjct: 1085 KINAVTP--EPIDTKELGHDLTYSCKFHMGAIGHSIQNYDGFRRKLQELMDSSVIEFYEG 1144

Query: 183  SMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIM---SYIQKPKAMTIEIPSP 242
            + + +   +  DT +   +S+   +  KPL I YEE  S M   S       +TIE+PSP
Sbjct: 1145 AEENLVGTINGDTPAEMASSSFGANKPKPLTIFYEENRSPMNDTSPTMIRSGITIEVPSP 1204

Query: 243  FAYKDNHVVPWKYECQFITNNVVS--------TTVEGLTRSGRCYTLANLKDVSKEDEVR 302
            F YK +  VPW YEC  +     +        T V  +TRSGRCY+           EV 
Sbjct: 1205 FPYKSDKAVPWNYECNILGTASSAPQASFEDLTGVGDITRSGRCYS----------PEVA 1264

Query: 303  RRKGKAIEMAGEDDL 306
             R GK     GE  L
Sbjct: 1265 ERVGKGKPAQGEGGL 1266

[Close]

BLAST of MELO3C023330 vs. TrEMBL
Match: A0A061E2I6_THECC (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein OS=Theobroma cacao GN=TCM_007834 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40
Identity = 111/319 (34.80%), Postives = 161/319 (50.47%), Query Frame = 1


Query: 3   YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
           YT LLPQL+++  +A  P EPL+PP+PKWYDPNA C+YH G  GHS ENC  LK KVQ+L
Sbjct: 368 YTTLLPQLIENRLLARTPLEPLRPPFPKWYDPNAHCDYHFGIQGHSTENCTALKHKVQAL 427

Query: 63  VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV-DTFTERNKNMVSGVTTSMNTLFQILH 122
           +KAG L F K  +  +V+ NPLPNH  P +N + +    R K  +  +   M+ +F+ L 
Sbjct: 428 IKAGLLNFAKK-DSSNVDGNPLPNHGRPTVNAIHEGMIRRVKKGIDEIQMPMDKVFEALS 487

Query: 123 GAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQI 182
               ++P     D +++G      C F++    HSI++C  F++                
Sbjct: 488 KINAITP--EPIDTKELGHDLTYSCKFHMGAIGHSIQNCDGFRH---------------- 547

Query: 183 SMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIM---SYIQKPKAMTIEIPSP 242
                       T +   +S+   +  KPL I YEE  S M   S       +TIE+PSP
Sbjct: 548 ------------TPAEVASSSFGANKPKPLTIFYEENKSPMNDTSPTMIRNGITIEVPSP 607

Query: 243 FAYKDNHVVPWKYECQFITNNVVS---------TTVEGLTRSGRCYTLANLKDVSKEDEV 302
           F YK +  VPW Y+C  I+    S         T V G+TRSGRCY+   ++ V K    
Sbjct: 608 FPYKSDKAVPWNYQCN-ISGTASSAPQASFEDLTGVGGITRSGRCYSPEVVERVGKGKPA 654

Query: 303 RRRKG-KAIEMAGEDDLND 308
           +   G K  +   +D +++
Sbjct: 668 QEEGGLKKADTFSKDQVDE 654

[Close]

BLAST of MELO3C023330 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo])

HSP 1 Score: 620.2 bits (1598), Expect = 2.0e-174
Identity = 298/304 (98.03%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 3   YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
           YT+LLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL
Sbjct: 321 YTKLLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 380

Query: 63  VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHG 122
           VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHG
Sbjct: 381 VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHG 440

Query: 123 AGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQIS 182
           AGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQIS
Sbjct: 441 AGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQIS 500

Query: 183 MQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPSPFAYK 242
           MQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPSPFAYK
Sbjct: 501 MQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTIEIPSPFAYK 560

Query: 243 DNHVVPWKYECQFITNNVVSTTVEGLTRSGRCYTLANLKDVSKEDEVRRRKGKAIEMAGE 302
           DNHVVPWKYECQFITNNVVSTTVEGLTRSGRCYTLANLKDVSKEDEVRRRKGKAIEMA E
Sbjct: 561 DNHVVPWKYECQFITNNVVSTTVEGLTRSGRCYTLANLKDVSKEDEVRRRKGKAIEMAVE 620

Query: 303 DDLN 307
            +++
Sbjct: 621 KEID 624

[Close]

BLAST of MELO3C023330 vs. NCBI nr
Match: gi|590658018|ref|XP_007034730.1| (Gag-pro-like protein [Theobroma cacao])

HSP 1 Score: 196.4 bits (498), Expect = 7.2e-47
Identity = 114/290 (39.31%), Postives = 163/290 (56.21%), Query Frame = 1


Query: 3   YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
           YT LLPQL+++  +A  P EPL+PP+PKWYDPNA C+YH G  GHS ENC  LK KVQ+L
Sbjct: 355 YTTLLPQLIENRLLARTPLEPLRPPFPKWYDPNAHCDYHFGIQGHSTENCTTLKHKVQAL 414

Query: 63  VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV-DTFTERNKNMVSGVTTSMNTLFQILH 122
           +KAG L F K  +   V+ NPLPNH    +N + +    R K  +  + T M+ +F+ L 
Sbjct: 415 IKAGLLNFAKK-DNSSVDGNPLPNHGRSTVNAIHEGMIRRVKKGIDEIQTPMDKVFEALS 474

Query: 123 GAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQI 182
               ++P     D E++G      C F++    HSI++C  F+  +Q+LMD+ ++     
Sbjct: 475 KINAITP--EPIDTEELGHDLAYSCKFHMGAIGHSIQNCDSFRRKLQELMDSSVIEF--- 534

Query: 183 SMQEIEVNMI----TDTSSTKKTSNETTSIWKPLVIHYEEKPSIMS---YIQKPKAMTIE 242
             +E+E N++     DT +   +S+   +  KPL I YEE  S M+          +TIE
Sbjct: 535 -YEEVEENLVGTINGDTPTEVASSSFKGNKPKPLTIFYEENRSPMNDTFPTMIRSGITIE 594

Query: 243 IPSPFAYKDNHVVPWKYECQFITNNVVS--------TTVEGLTRSGRCYT 277
           +PSPF YK +  VPW YEC  +     S        T+V G+TRSGRCY+
Sbjct: 595 VPSPFPYKSDKAVPWNYECNILGTASSSPQASLEDLTSVGGITRSGRCYS 637

[Close]

BLAST of MELO3C023330 vs. NCBI nr
Match: gi|590636870|ref|XP_007028966.1| (Uncharacterized protein TCM_024883 [Theobroma cacao])

HSP 1 Score: 192.6 bits (488), Expect = 1.0e-45
Identity = 117/311 (37.62%), Postives = 166/311 (53.38%), Query Frame = 1


Query: 3    YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
            YT LLPQL++   +   P EPL+PP+PKWYDPNA C+YH G  GHS ENC  LK KVQ+L
Sbjct: 1059 YTTLLPQLIEKRLLTQTPLEPLRPPFPKWYDPNAHCDYHFGIQGHSTENCTALKHKVQAL 1118

Query: 63   VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV-DTFTERNKNMVSGVTTSMNTLFQILH 122
            +KAG L F K  +   V+ NPL NH  P +N + +    R K  +  + T M+ +F+ L 
Sbjct: 1119 IKAGLLNFTKK-DSSSVDGNPLLNHGRPTVNAIHEGMIRRVKKGIDEIQTPMDKVFEALS 1178

Query: 123  GAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQI 182
                ++P     D +++G      C F++    HSI++C  F+  +Q+LMD+ I+   + 
Sbjct: 1179 KINAITP--EPIDTKELGHDLAYSCKFHMGAIGHSIQNCDGFRRKLQELMDSSIIEFYEG 1238

Query: 183  SMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIM---SYIQKPKAMTIEIPSP 242
            + + +   +  DT +   +S+   +  KPL I YEE  S M   S       +TIE+PSP
Sbjct: 1239 AEENLVGTIYGDTPAEVASSSFGANKPKPLTIFYEENKSPMNDTSPTMIRNGITIEVPSP 1298

Query: 243  FAYKDNHVVPWKYECQFITNNVVS--------TTVEGLTRSGRCYTLANLKDVSKEDEVR 302
            F YK++  VPW YEC  +     +        T V G+TRSGRCY        S E   R
Sbjct: 1299 FPYKNDKAVPWNYECNILGTASSAPQASFEDITGVGGITRSGRCY--------SPEVAER 1358

[Close]

BLAST of MELO3C023330 vs. NCBI nr
Match: gi|590695072|ref|XP_007044788.1| (Uncharacterized protein TCM_010507 [Theobroma cacao])

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 126/318 (39.62%), Postives = 166/318 (52.20%), Query Frame = 1


Query: 3   YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
           Y EL  QL+ +H VA +  EPL+PP+P+WYD +A C+YH G  GHSIENC   K KVQ L
Sbjct: 456 YAELFTQLVANHLVAPLYIEPLKPPFPRWYDTSAHCDYHYGIEGHSIENCTAFKHKVQGL 515

Query: 63  VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV--DTFTERNKNMVSGVTTSMNTLFQIL 122
           +KAG L F+K  E+ +VN NPLPNH G  +N +  + + +RN   +  V TSM  +F+ L
Sbjct: 516 IKAGILNFEKKPEQ-NVNNNPLPNHAGAGVNAIEREVYVKRN---IREVETSMEKVFEAL 575

Query: 123 HGAGYLS-----PRFNND-DGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMD-A 182
             A  L      P  N+  D +++ C+  + C+       HSI+ C  F+  VQ++MD +
Sbjct: 576 VKADMLKVWPECPNVNDSRDIQRLCCLYHKGCV------GHSIQGCSSFRKEVQRMMDES 635

Query: 183 KILLVGQISMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIMSYIQKPKAMTI 242
           KI    + S  E  VNMI+      K S     I KPL I YE K  ++      K M I
Sbjct: 636 KIEFYTEAS--ESAVNMIS------KESTHPMKI-KPLTIFYEPKGELVEDKNHAK-MVI 695

Query: 243 EIPSPFAYKDNHVVPWKYECQFITNNVVS------------TTVEGLTRSGRCYT----- 294
           E+P PF YKDN  VPW Y C    +                T V G+TRSGRCY+     
Sbjct: 696 EVPKPFPYKDNKAVPWNYNCNVQVSEAKKWIAESQDDAANITGVGGITRSGRCYSPEAFE 753

[Close]

BLAST of MELO3C023330 vs. NCBI nr
Match: gi|590715508|ref|XP_007050215.1| (Uncharacterized protein TCM_003960 [Theobroma cacao])

HSP 1 Score: 184.5 bits (467), Expect = 2.8e-43
Identity = 115/315 (36.51%), Postives = 164/315 (52.06%), Query Frame = 1


Query: 3    YTELLPQLLKSHQVAIVPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSL 62
            YT LLPQL+++  +A  P EPL+P +PKWYDPNA C+YH G  GHS ENC  LK KVQ L
Sbjct: 965  YTTLLPQLIENRLLARTPLEPLRPSFPKWYDPNAHCDYHFGIQGHSTENCTALKHKVQVL 1024

Query: 63   VKAGWLKFKKTGEELDVNQNPLPNHEGPAINVV-DTFTERNKNMVSGVTTSMNTLFQILH 122
            +KAG L F K  +   V+ NPLPNH  P +N + +      K  +  + T M+ +F+ L 
Sbjct: 1025 IKAGLLNFTKK-DSSGVDGNPLPNHGRPTVNAIHEGMIRMVKKGIDEIQTPMDKVFEALS 1084

Query: 123  GAGYLSPRFNNDDGEKIGCVNKEECLFYLETNDHSIEDCCEFKNWVQKLMDAKILLVGQI 182
                ++P     D +++G      C F++    HSI++   F+  +Q+LMD+ ++   + 
Sbjct: 1085 KINAVTP--EPIDTKELGHDLTYSCKFHMGAIGHSIQNYDGFRRKLQELMDSSVIEFYEG 1144

Query: 183  SMQEIEVNMITDTSSTKKTSNETTSIWKPLVIHYEEKPSIM---SYIQKPKAMTIEIPSP 242
            + + +   +  DT +   +S+   +  KPL I YEE  S M   S       +TIE+PSP
Sbjct: 1145 AEENLVGTINGDTPAEMASSSFGANKPKPLTIFYEENRSPMNDTSPTMIRSGITIEVPSP 1204

Query: 243  FAYKDNHVVPWKYECQFITNNVVS--------TTVEGLTRSGRCYTLANLKDVSKEDEVR 302
            F YK +  VPW YEC  +     +        T V  +TRSGRCY+           EV 
Sbjct: 1205 FPYKSDKAVPWNYECNILGTASSAPQASFEDLTGVGDITRSGRCYS----------PEVA 1264

Query: 303  RRKGKAIEMAGEDDL 306
             R GK     GE  L
Sbjct: 1265 ERVGKGKPAQGEGGL 1266

The following BLAST results are available for this feature:

BLAST of MELO3C023330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061ELG5_THECC	5.0e-47	39.31	Gag-pro-like protein OS=Theobroma cacao GN=TCM_020601 PE=4 SV=1	[more]
A0A061EXR3_THECC	7.2e-46	37.62	Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1	[more]
A0A061E6J4_THECC	1.0e-44	39.62	Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1	[more]
A0A061DPM2_THECC	2.0e-43	36.51	Uncharacterized protein OS=Theobroma cacao GN=TCM_003960 PE=4 SV=1	[more]
A0A061E2I6_THECC	4.5e-40	34.80	RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein...	[more]

BLAST of MELO3C023330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122237\|ref\|XP_008461036.1\|	2.0e-174	98.03	PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo]	[more]
gi\|590658018\|ref\|XP_007034730.1\|	7.2e-47	39.31	Gag-pro-like protein [Theobroma cacao]	[more]
gi\|590636870\|ref\|XP_007028966.1\|	1.0e-45	37.62	Uncharacterized protein TCM_024883 [Theobroma cacao]	[more]
gi\|590695072\|ref\|XP_007044788.1\|	1.5e-44	39.62	Uncharacterized protein TCM_010507 [Theobroma cacao]	[more]
gi\|590715508\|ref\|XP_007050215.1\|	2.8e-43	36.51	Uncharacterized protein TCM_003960 [Theobroma cacao]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023330T1	MELO3C023330T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023330	Melon (DHL92) v3.5.1	memeB042
MELO3C023330	Cucumber (Gy14) v1	cgymeB148
MELO3C023330	Cucumber (Gy14) v1	cgymeB611
MELO3C023330	Cucurbita maxima (Rimu)	cmameB503
MELO3C023330	Cucurbita maxima (Rimu)	cmameB549
MELO3C023330	Cucurbita moschata (Rifu)	cmomeB538
MELO3C023330	Cucurbita moschata (Rifu)	cmomeB495
MELO3C023330	Wild cucumber (PI 183967)	cpimeB090
MELO3C023330	Wild cucumber (PI 183967)	cpimeB267
MELO3C023330	Wild cucumber (PI 183967)	cpimeB518
MELO3C023330	Cucumber (Chinese Long) v2	cumeB092
MELO3C023330	Cucumber (Chinese Long) v2	cumeB513
MELO3C023330	Watermelon (Charleston Gray)	mewcgB081
MELO3C023330	Watermelon (Charleston Gray)	mewcgB111
MELO3C023330	Watermelon (Charleston Gray)	mewcgB125
MELO3C023330	Watermelon (97103) v1	mewmB129
MELO3C023330	Watermelon (97103) v1	mewmB134
MELO3C023330	Cucurbita pepo (Zucchini)	cpemeB210
MELO3C023330	Cucurbita pepo (Zucchini)	cpemeB248
MELO3C023330	Bottle gourd (USVL1VR-Ls)	lsimeB086
MELO3C023330	Cucurbita pepo (Zucchini)	cpemeB656
MELO3C023330	Bottle gourd (USVL1VR-Ls)	lsimeB045
MELO3C023330	Cucumber (Gy14) v2	cgybmeB078
MELO3C023330	Cucumber (Gy14) v2	cgybmeB451
MELO3C023330	Silver-seed gourd	carmeB0109
MELO3C023330	Silver-seed gourd	carmeB0303
MELO3C023330	Silver-seed gourd	carmeB0320
MELO3C023330	Cucumber (Chinese Long) v3	cucmeB097
MELO3C023330	Cucumber (Chinese Long) v3	cucmeB273
MELO3C023330	Cucumber (Chinese Long) v3	cucmeB530
MELO3C023330	Watermelon (97103) v2	mewmbB089
MELO3C023330	Watermelon (97103) v2	mewmbB113
MELO3C023330	Wax gourd	mewgoB130