MELO3C023121 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023121
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAsc-type amino acid transporter 1
Locationchr8 : 15057587 .. 15057889 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACAAATCCTCAAGCCTCCCTACAATCCCAAGAATCCAAACCCATAAAATCCAAATCGCCACGTCCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCATGAATCTAATAAGGATCTTGCCCTTATTTTGATTGAGTCAACTGGAACCTCCTTATCGCGTCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTACAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

mRNA sequence

ATGCCAACAAATCCTCAAGCCTCCCTACAATCCCAAGAATCCAAACCCATAAAATCCAAATCGCCACGTCCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCATGAATCTAATAAGGATCTTGCCCTTATTTTGATTGAGTCAACTGGAACCTCCTTATCGCGTCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTACAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

Coding sequence (CDS)

ATGCCAACAAATCCTCAAGCCTCCCTACAATCCCAAGAATCCAAACCCATAAAATCCAAATCGCCACGTCCCATCACTGACCTGACCACCACTTCCTCGCCCAGGCATGAATCTAATAAGGATCTTGCCCTTATTTTGATTGAGTCAACTGGAACCTCCTTATCGCGTCAAGAGGAAACTCCTCAACCTTTTGATGCAATCCCTCCCAACCAAACCAAATCACCTAGCCCTGAAACTTTGAATTACAATGTCTTCCACGAAACCTCCTCTGACCCAGCAACATTGTTGGATAATGCGACTTAG

Protein sequence

MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEETPQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT*
Homology
[Close]
BLAST of MELO3C023121 vs. TrEMBL
Match: E5GCD9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 9.3e-27
Identity = 66/100 (66.00%), Postives = 73/100 (73.00%), Query Frame = 1 

Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT  + S QSQ+SKP KSKSP PI  LTTTSSP+H++NK   LIL    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 101
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

[Close]
BLAST of MELO3C023121 vs. NCBI nr
Match: gi|307136315|gb|ADN34138.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-26
Identity = 66/100 (66.00%), Postives = 73/100 (73.00%), Query Frame = 1 

Query: 1   MPTNPQASLQSQESKPIKSKSPRPITDLTTTSSPRHESNKDLALILIESTGTSLSRQEET 60
           MPT  + S QSQ+SKP KSKSP PI  LTTTSSP+H++NK   LIL    GTSL  QEET
Sbjct: 1   MPTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEET 60

Query: 61  PQPFDAIPPNQTKSPSPETLNYNVFHETSSDPATLLDNAT 101
           PQP DAIP NQ K PSPET N +VFHET   P TLLD+AT
Sbjct: 61  PQPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDAT 100

The following BLAST results are available for this feature:
BLAST of MELO3C023121 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCD9_CUCME9.3e-2766.00Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C023121 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136315|gb|ADN34138.1|1.3e-2666.00hypothetical protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023121T1MELO3C023121T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023121Cucurbita pepo (Zucchini)cpemeB064
MELO3C023121Cucurbita pepo (Zucchini)cpemeB451
MELO3C023121Cucurbita pepo (Zucchini)cpemeB465
MELO3C023121Bottle gourd (USVL1VR-Ls)lsimeB152
MELO3C023121Cucumber (Gy14) v2cgybmeB287
MELO3C023121Silver-seed gourdcarmeB0196
MELO3C023121Silver-seed gourdcarmeB0285
MELO3C023121Silver-seed gourdcarmeB0288
MELO3C023121Cucumber (Chinese Long) v3cucmeB338
MELO3C023121Wax gourdmewgoB646
MELO3C023121Cucumber (Gy14) v1cgymeB287
MELO3C023121Cucurbita maxima (Rimu)cmameB613
MELO3C023121Cucurbita maxima (Rimu)cmameB621
MELO3C023121Cucurbita maxima (Rimu)cmameB805
MELO3C023121Cucurbita maxima (Rimu)cmameB810
MELO3C023121Cucurbita moschata (Rifu)cmomeB601
MELO3C023121Cucurbita moschata (Rifu)cmomeB609
MELO3C023121Cucurbita moschata (Rifu)cmomeB789
MELO3C023121Cucurbita moschata (Rifu)cmomeB794
MELO3C023121Wild cucumber (PI 183967)cpimeB332
MELO3C023121Cucumber (Chinese Long) v2cumeB331