MELO3C023097 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023097
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionFerric reductase transmembrane component 4
Locationchr8 : 14574062 .. 14574469 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCGGAAAAAGGAAGTGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCATCCTCACCTATGAATTCAGATCAATATGCAATGGATTTAGAGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGACTGGGTCTCCCACGGAGTCATCAACTCCACCTAGGCCTTTAGCCAATCTTATCCGTCCTTCTGGCGGAGTTGTTCAAATGAGGCCTCCTACCTCTCCTTCATCCAATAGGGAGTCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGATTTGTGCCAAGACCCAAAATCAAATCTTATTTTCAAAAGCCTATCGTCGTTTATGATCCTATCATATAA

mRNA sequence

ATGAGTTCGGAAAAAGGAAGTGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCATCCTCACCTATGAATTCAGATCAATATGCAATGGATTTAGAGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGACTGGGTCTCCCACGGAGTCATCAACTCCACCTAGGCCTTTAGCCAATCTTATCCGTCCTTCTGGCGGAGTTGTTCAAATGAGGCCTCCTACCTCTCCTTCATCCAATAGGGAGTCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGATTTGTGCCAAGACCCAAAATCAAATCTTATTTTCAAAAGCCTATCGTCGTTTATGATCCTATCATATAA

Coding sequence (CDS)

ATGAGTTCGGAAAAAGGAAGTGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCATCCTCACCTATGAATTCAGATCAATATGCAATGGATTTAGAGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCAGCATACGGACTGGGTCTCCCACGGAGTCATCAACTCCACCTAGGCCTTTAGCCAATCTTATCCGTCCTTCTGGCGGAGTTGTTCAAATGAGGCCTCCTACCTCTCCTTCATCCAATAGGGAGTCTTCTACTCCTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGATTTGTGCCAAGACCCAAAATCAAATCTTATTTTCAAAAGCCTATCGTCGTTTATGATCCTATCATATAA

Protein sequence

MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTGSPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKIKSYFQKPIVVYDPII*
Homology
[Close]
BLAST of MELO3C023097 vs. TrEMBL
Match: E5GCE6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.4e-56
Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 1 

Query: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60
           MSSEKGSARGRTNSTSSKG+ PSSSSNS  SPM++ QY MDL FT VTRSRSR SSI  G
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRP  NLIRPSGGV+QMRPP SPSSNRESSTPPTTYSQAVT DKRFVPRP+I
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQK IVVYDPII
Sbjct: 121 KSYFQKSIVVYDPII 135

[Close]
BLAST of MELO3C023097 vs. TrEMBL
Match: A0A0A0K595_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G361530 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.9e-31
Identity = 74/106 (69.81%), Postives = 84/106 (79.25%), Query Frame = 1 

Query: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60
           MS E+GS RGR NS SS+GNHPSS SN A SPM++DQYAM+L FTTVT SR+RSS I+ G
Sbjct: 3   MSLERGSVRGRANSISSRGNHPSSYSNLAPSPMSADQYAMNLGFTTVTISRARSSDIQIG 62

Query: 61  -SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYS 106
            + TESSTPPRP  NLIRPSG V+Q RP  S  SNR+SS PPTTYS
Sbjct: 63  YNSTESSTPPRPSTNLIRPSGEVIQTRPSASSLSNRDSSPPPTTYS 108

[Close]
BLAST of MELO3C023097 vs. NCBI nr
Match: gi|659098578|ref|XP_008450208.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 119/135 (88.15%), Postives = 122/135 (90.37%), Query Frame = 1 

Query: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60
           MSSEKGSARGRTNSTSSKGN PSSSSN A SPM++DQYAMDLEFTT+TRSRSRSS IR G
Sbjct: 1   MSSEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSADQYAMDLEFTTITRSRSRSSGIRIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRP ANLIR S GVVQMRP  SPSSNRESSTPPTTYS  VTPDKRFVPRPKI
Sbjct: 61  SPTESSTPPRPSANLIRLSDGVVQMRPHASPSSNRESSTPPTTYSHTVTPDKRFVPRPKI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQK IVVYDPII
Sbjct: 121 KSYFQKSIVVYDPII 135

[Close]
BLAST of MELO3C023097 vs. NCBI nr
Match: gi|307136323|gb|ADN34145.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 225.3 bits (573), Expect = 6.3e-56
Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 1 

Query: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60
           MSSEKGSARGRTNSTSSKG+ PSSSSNS  SPM++ QY MDL FT VTRSRSR SSI  G
Sbjct: 1   MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIG 60

Query: 61  SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYSQAVTPDKRFVPRPKI 120
           SPTESSTPPRP  NLIRPSGGV+QMRPP SPSSNRESSTPPTTYSQAVT DKRFVPRP+I
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESSTPPTTYSQAVTLDKRFVPRPEI 120

Query: 121 KSYFQKPIVVYDPII 136
           KSYFQK IVVYDPII
Sbjct: 121 KSYFQKSIVVYDPII 135

[Close]
BLAST of MELO3C023097 vs. NCBI nr
Match: gi|700189415|gb|KGN44648.1| (hypothetical protein Csa_7G361530 [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 7.0e-31
Identity = 74/106 (69.81%), Postives = 84/106 (79.25%), Query Frame = 1 

Query: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNSASSPMNSDQYAMDLEFTTVTRSRSRSSSIRTG 60
           MS E+GS RGR NS SS+GNHPSS SN A SPM++DQYAM+L FTTVT SR+RSS I+ G
Sbjct: 3   MSLERGSVRGRANSISSRGNHPSSYSNLAPSPMSADQYAMNLGFTTVTISRARSSDIQIG 62

Query: 61  -SPTESSTPPRPLANLIRPSGGVVQMRPPTSPSSNRESSTPPTTYS 106
            + TESSTPPRP  NLIRPSG V+Q RP  S  SNR+SS PPTTYS
Sbjct: 63  YNSTESSTPPRPSTNLIRPSGEVIQTRPSASSLSNRDSSPPPTTYS 108

The following BLAST results are available for this feature:
BLAST of MELO3C023097 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCE6_CUCME4.4e-5685.19Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K595_CUCSA4.9e-3169.81Uncharacterized protein OS=Cucumis sativus GN=Csa_7G361530 PE=4 SV=1[more]
BLAST of MELO3C023097 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659098578|ref|XP_008450208.1|1.4e-5888.15PREDICTED: putative protein TPRXL [Cucumis melo][more]
gi|307136323|gb|ADN34145.1|6.3e-5685.19hypothetical protein [Cucumis melo subsp. melo][more]
gi|700189415|gb|KGN44648.1|7.0e-3169.81hypothetical protein Csa_7G361530 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023097T1MELO3C023097T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023097Cucurbita maxima (Rimu)cmameB613
MELO3C023097Cucurbita maxima (Rimu)cmameB810
MELO3C023097Cucurbita moschata (Rifu)cmomeB601
MELO3C023097Cucurbita moschata (Rifu)cmomeB609
MELO3C023097Cucurbita moschata (Rifu)cmomeB794
MELO3C023097Watermelon (Charleston Gray)mewcgB534
MELO3C023097Watermelon (97103) v1mewmB580
MELO3C023097Cucurbita pepo (Zucchini)cpemeB064
MELO3C023097Cucurbita pepo (Zucchini)cpemeB451
MELO3C023097Watermelon (97103) v2mewmbB544