MELO3C022667.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022667.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	F15I1.22
Location	chr04 : 19354599 .. 19355338 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACTTAATCTGTGCCTAATTATTCTAGTTCTTATCAGCCTCTTCTCTCTATTTCACTATCCCTTAGTTGCATAAAAACTGAAAATTATAATGGCTGAAAGCTATGGGGATCATCAGGAAGAACTGCGGCGCCATGGGATTCAGTTTCGGAGGCGACGAAAAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACGGATCATGGCGTGGGGGAGGATAGTGAGGAAGATAAGACTGAAATGGGTGAAAATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAAAGTTGATGAAGGATATAATGGAAGCAGGAGCATATGGATACGCTGACTCGTATCAGCATAGGCTTCTTTTGGAGACTTCTTTCGCTATTCCAATTCTGGGTGTCTCTCTCTCTACTCATTCTAGTATTATTCATGCTGCTGCAGCTGCTTCTTCATAAATCTCTACCTTTCAACTCTAAATTTGTAAAGAAATTTCTTTTATTAGTGTTCATCATTAATTAATTAATACATATTTGGGATTTTTCTTTCTCTTTTTTTGCTTAATTCTAAAATCAACATTGAACTTTAAAAGATACTGACTTGTTTAAAATATATTGATTTTGTTTTTAGTTCTTTGGTTTAAATTTAGGCTTATTTTTCTTGGTGTATTATACTTCAGTGGTTTTTACTTTTATTTTAAAAAGAAAAAAAAATCCTGAATGTGTTCACACAAAATTTTTGG

mRNA sequence

ACACTTAATCTGTGCCTAATTATTCTAGTTCTTATCAGCCTCTTCTCTCTATTTCACTATCCCTTAGTTGCATAAAAACTGAAAATTATAATGGCTGAAAGCTATGGGGATCATCAGGAAGAACTGCGGCGCCATGGGATTCAGTTTCGGAGGCGACGAAAAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACGGATCATGGCGTGGGGGAGGATAGTGAGGAAGATAAGACTGAAATGGGTGAAAATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAAAGTTGATGAAGGATATAATGGAAGCAGGAGCATATGGATACGCTGACTCGTATCAGCATAGGCTTCTTTTGGAGACTTCTTTCGCTATTCCAATTCTGGGTGTCTCTCTCTCTACTCATTCTAGTATTATTCATGCTGCTGCAGCTGCTTCTTCATAAATCTCTACCTTTCAACTCTAAATTTGTAAAGAAATTTCTTTTATTAGTGTTCATCATTAATTAATTAATACATATTTGGGATTTTTCTTTCTCTTTTTTTGCTTAATTCTAAAATCAACATTGAACTTTAAAAGATACTGACTTGTTTAAAATATATTGATTTTGTTTTTAGTTCTTTGGTTTAAATTTAGGCTTATTTTTCTTGGTGTATTATACTTCAGTGGTTTTTACTTTTATTTTAAAAAGAAAAAAAAATCCTGAATGTGTTCACACAAAATTTTTGG

Coding sequence (CDS)

ATGGCTGAAAGCTATGGGGATCATCAGGAAGAACTGCGGCGCCATGGGATTCAGTTTCGGAGGCGACGAAAAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGACGGATCATGGCGTGGGGGAGGATAGTGAGGAAGATAAGACTGAAATGGGTGAAAATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAAAAGTTGATGAAGGATATAATGGAAGCAGGAGCATATGGATACGCTGACTCGTATCAGCATAGGCTTCTTTTGGAGACTTCTTTCGCTATTCCAATTCTGGGTGTCTCTCTCTCTACTCATTCTAGTATTATTCATGCTGCTGCAGCTGCTTCTTCATAA

Protein sequence

MAESYGDHQEELRRHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIIHAAAAASS

Homology

[Close]

BLAST of MELO3C022667.2 vs. NCBI nr
Match: XP_011652825.1 (PREDICTED: uncharacterized protein LOC105435118 [Cucumis sativus] >KGN58439.1 hypothetical protein Csa_3G644780 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAESYGDHQEELRRHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEM 60
           MA SY DHQEELRR GIQFRRRR+MAVARLGGKRSGRI+ WGRIVRKIRLKWVKMKCIEM
Sbjct: 1   MAGSYEDHQEELRRCGIQFRRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEM 60

Query: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIIHAAAAAS 120
           VKKMKKYYK+LMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS IHAA AA+
Sbjct: 61  VKKMKKYYKELMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS-IHAATAAT 120

Query: 121 S 122
           S
Sbjct: 121 S 120

[Close]

BLAST of MELO3C022667.2 vs. NCBI nr
Match: XP_022948735.1 (uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 uncharacterized protein LOC111787905 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.1 bits (375), Expect = 1.0e-32
Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 14  RHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLMK 73
           R GIQFRRRR MAVARLGGKRSGR++AWGR +RKIRL+WVK+KCI MVKK+KKY   LMK
Sbjct: 22  RQGIQFRRRR-MAVARLGGKRSGRLVAWGRRLRKIRLRWVKLKCIAMVKKVKKYCASLMK 81

Query: 74  DIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIIHAAAAA 120
           D+MEAGAYG  DSYQHRLLLETSFAIPILGVS STHS+  HAAA+A
Sbjct: 82  DMMEAGAYG--DSYQHRLLLETSFAIPILGVSFSTHST--HAAASA 122

[Close]

BLAST of MELO3C022667.2 vs. NCBI nr
Match: XP_022956317.1 (uncharacterized protein LOC111458050 [Cucurbita moschata])

HSP 1 Score: 144.4 bits (363), Expect = 2.5e-31
Identity = 76/97 (78.35%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 21  RRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIMEAGA 80
           RRR+M VARLGGKRSGR++AWGR++RKIRL+WVK+KCI MVKKMK+YY +LMKDI+EAGA
Sbjct: 31  RRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVKLKCIAMVKKMKEYYTRLMKDIIEAGA 90

Query: 81  YGYADSYQHRLLLETSFAIPILGVSLSTHSSIIHAAA 118
             YA SYQHRLLLETSFAIPILGVSLSTHSS++ A +
Sbjct: 91  --YARSYQHRLLLETSFAIPILGVSLSTHSSVLAATS 125

[Close]

BLAST of MELO3C022667.2 vs. NCBI nr
Match: XP_022148258.1 (uncharacterized protein LOC111016963 [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-22
Identity = 64/98 (65.31%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 14  RHGIQFRRRRKMAVARLGGKRSGRIMA-WGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLM 73
           R GIQFRRRR+M VARLGG  SG      GR+VRKIR++WVK++C+ MVKKMKK+Y+K++
Sbjct: 45  RRGIQFRRRRRMPVARLGGPGSGSGPGRLGRMVRKIRVRWVKLRCLAMVKKMKKWYRKVL 104

Query: 74  KDIMEA-GAYGYADSYQHRLLLETSFAIPILGVSLSTH 110
           KD++EA  A  Y +SYQHR+LLETSFAIPIL  SLST+
Sbjct: 105 KDVIEAQAAVAYPESYQHRVLLETSFAIPILPRSLSTY 142

[Close]

BLAST of MELO3C022667.2 vs. NCBI nr
Match: PQP92106.1 (uncharacterized protein Pyn_38592 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 86.7 bits (213), Expect = 6.1e-14
Identity = 49/114 (42.98%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MAESYGDHQEELR--RHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCI 60
           MA+ +  H++  R  R G   RR RK+ VARLGG++  R + + ++++KIR++W+K++ +
Sbjct: 1   MAQDHDLHRQNQRLVRRGFPLRRSRKLPVARLGGQKPKRGLVFVKMLKKIRMRWLKLQYL 60

Query: 61  EMVKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSI 113
            M+KK+K+ YK +MKD+M+AGA    +++  R+ +ETSFAIP +GVSLS++ S+
Sbjct: 61  CMLKKLKESYKNMMKDVMQAGA--SLETFHQRIFMETSFAIP-MGVSLSSYPSV 111

[Close]

BLAST of MELO3C022667.2 vs. TAIR10
Match: AT1G54120.1 (unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09
Identity = 37/94 (39.36%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 21  RRRKMAVARLGGKRSGRI---MAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIME 80
           RRRK  V RLGGK S       +  ++VR+++L+W+K+  + +VKK+K +Y+ L+K+ ++
Sbjct: 23  RRRKSQVVRLGGKNSAVSRGGFSLKKMVRRMKLRWLKLHYVRVVKKIKVFYRNLVKEFVD 82

Query: 81  AGAYGYADSYQHRLLLE-TSFAIPILGVSLSTHS 111
           AGA    ++ Q R+ +E  +FA+P LG+S S+ S
Sbjct: 83  AGA--ELEAIQQRMAVEAAAFAVPGLGLSFSSFS 114

[Close]

BLAST of MELO3C022667.2 vs. TAIR10
Match: AT3G14060.1 (unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 19  FRRRRKMAVARLGGKRSGRIMAWG--RIVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIM 78
           + RRRK  V RLGGK S    ++   ++V ++RLKW+++  + +VKK+K YY+ ++K+  
Sbjct: 24  YLRRRKPQVVRLGGKNSTPRGSFSLKKVVTRMRLKWLRLYYVRLVKKIKAYYRTIVKEFE 83

Query: 79  EAGAYGYADSYQHRLLLET-SFAIPILGVSLSTHSSII 114
           EAG    A + Q R+ +ET +FA P LG+S    S  +
Sbjct: 84  EAG----AATIQQRMTVETAAFAAPGLGLSFCPMSGYV 117

[Close]

BLAST of MELO3C022667.2 vs. TrEMBL
Match: tr|A0A0A0LBW7|A0A0A0LBW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-49
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAESYGDHQEELRRHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEM 60
           MA SY DHQEELRR GIQFRRRR+MAVARLGGKRSGRI+ WGRIVRKIRLKWVKMKCIEM
Sbjct: 1   MAGSYEDHQEELRRCGIQFRRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEM 60

Query: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIIHAAAAAS 120
           VKKMKKYYK+LMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS IHAA AA+
Sbjct: 61  VKKMKKYYKELMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS-IHAATAAT 120

Query: 121 S 122
           S
Sbjct: 121 S 120

[Close]

BLAST of MELO3C022667.2 vs. TrEMBL
Match: tr|A0A2I4FTL7|A0A2I4FTL7_9ROSI (uncharacterized protein LOC109001943 OS=Juglans regia OX=51240 GN=LOC109001943 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-13
Identity = 43/101 (42.57%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 14  RHGIQFRRRRKMAVARLG--GKRSGRIMAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKL 73
           R  I  RRRRK+ + RLG  GK+  R++   ++ R+IRL+W+K++ I M++K KKYY+ L
Sbjct: 27  RRQIPLRRRRKLPIVRLGSDGKKPRRVLTLVKMFRRIRLRWLKLQYIRMMRKFKKYYRNL 86

Query: 74  MKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSI 113
           +KD+MEAGA    +++  R+++E S A+P++GVS +++ S+
Sbjct: 87  VKDLMEAGA--TLETFHQRVIMEASLAVPVMGVSFNSYPSV 125

[Close]

BLAST of MELO3C022667.2 vs. TrEMBL
Match: tr|M5X878|M5X878_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G039100 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.8e-13
Identity = 49/114 (42.98%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 1   MAESYGDHQEE--LRRHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCI 60
           MA+ +  H++   L R G   RR RK+ VARLGG +  R + + +++++IR++W+K++ +
Sbjct: 1   MAQDHDLHRQNQPLVRRGFPLRRSRKLPVARLGGPKPKRGLVFVKMLKRIRMRWLKLQYL 60

Query: 61  EMVKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSI 113
            M+KK+K+ YK +MKD+M AGA    +++  R+ +ETSFAIP LGVSLS++ S+
Sbjct: 61  CMLKKLKESYKNMMKDLMVAGA--SLETFHQRIFMETSFAIP-LGVSLSSYPSV 111

[Close]

BLAST of MELO3C022667.2 vs. TrEMBL
Match: tr|A0A067L0E6|A0A067L0E6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24687 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.9e-12
Identity = 43/92 (46.74%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 21  RRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIMEAGA 80
           RRRKM   RLGGK+  R +   R+++K+RL+W+K++   M++K+K+YY  L+KDI+EAGA
Sbjct: 33  RRRKMHTVRLGGKKPRRGLFLLRMLKKMRLRWLKLQYSCMLRKLKEYYSNLIKDIVEAGA 92

Query: 81  YGYADSYQHRLLLETSFAIPILGVSLSTHSSI 113
               +SYQ RL++E S A+P++G+S S + S+
Sbjct: 93  --TIESYQQRLVMEASLAVPVMGISFSGYPSM 122

[Close]

BLAST of MELO3C022667.2 vs. TrEMBL
Match: tr|A0A2U1KX00|A0A2U1KX00_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA082040 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.4e-12
Identity = 42/89 (47.19%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 20  RRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIMEAG 79
           RR++K+   RLGG+R      + R++RKIR+KW+KMK    +KK+K+YY  ++KD++EAG
Sbjct: 22  RRKKKVQTVRLGGRR----QIFVRMIRKIRIKWMKMKQACTLKKLKEYYYSVLKDVIEAG 81

Query: 80  AYGYADSYQHRLLLETSFAIPILGVSLST 109
             G  +++Q RL++ETSFA+P+LG+S +T
Sbjct: 82  --GSFETFQQRLMMETSFAVPVLGLSFNT 104

The following BLAST results are available for this feature:

BLAST of MELO3C022667.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652825.1	2.0e-49	91.74	PREDICTED: uncharacterized protein LOC105435118 [Cucumis sativus] >KGN58439.1 hy...	[more]
XP_022948735.1	1.0e-32	80.19	uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 unchar...	[more]
XP_022956317.1	2.5e-31	78.35	uncharacterized protein LOC111458050 [Cucurbita moschata]	[more]
XP_022148258.1	2.7e-22	65.31	uncharacterized protein LOC111016963 [Momordica charantia]	[more]
PQP92106.1	6.1e-14	42.98	uncharacterized protein Pyn_38592 [Prunus yedoensis var. nudiflora]	[more]

BLAST of MELO3C022667.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54120.1	3.2e-09	39.36	unknown protein	[more]
AT3G14060.1	2.7e-08	38.78	unknown protein	[more]

BLAST of MELO3C022667.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C022667.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBW7\|A0A0A0LBW7_CUCSA	1.3e-49	91.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1	[more]
tr\|A0A2I4FTL7\|A0A2I4FTL7_9ROSI	3.4e-13	42.57	uncharacterized protein LOC109001943 OS=Juglans regia OX=51240 GN=LOC109001943 P...	[more]
tr\|M5X878\|M5X878_PRUPE	5.8e-13	42.98	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G039100 PE=4 SV=1	[more]
tr\|A0A067L0E6\|A0A067L0E6_JATCU	4.9e-12	46.74	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24687 PE=4 SV=1	[more]
tr\|A0A2U1KX00\|A0A2U1KX00_ARTAN	6.4e-12	47.19	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA082040 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022667.2.1	MELO3C022667.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34788	FAMILY NOT NAMED	coord: 14..111

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C022667.2	Csa3G644780	Cucumber (Chinese Long) v2	cumedB195
MELO3C022667.2	CSPI03G28310	Wild cucumber (PI 183967)	cpimedB196
MELO3C022667.2	Cucsa.149530	Cucumber (Gy14) v1	cgymedB250
MELO3C022667.2	CmaCh01G000090	Cucurbita maxima (Rimu)	cmamedB483
MELO3C022667.2	CmoCh14G012190	Cucurbita moschata (Rifu)	cmomedB240
MELO3C022667.2	CmoCh01G000080	Cucurbita moschata (Rifu)	cmomedB468
MELO3C022667.2	Lsi07G006670	Bottle gourd (USVL1VR-Ls)	lsimedB457
MELO3C022667.2	Cp4.1LG02g17430	Cucurbita pepo (Zucchini)	cpemedB623
MELO3C022667.2	Cla012529	Watermelon (97103) v1	medwmB356
MELO3C022667.2	ClCG07G014560	Watermelon (Charleston Gray)	medwcgB343
MELO3C022667.2	Cla97C07G141420	Watermelon (97103) v2	medwmbB338
MELO3C022667.2	Bhi01G002259	Wax gourd	medwgoB394
MELO3C022667.2	Carg27132	Silver-seed gourd	carmedB0473
MELO3C022667.2	CsaV3_3G030710	Cucumber (Chinese Long) v3	cucmedB201

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022667.2	Cucumber (Gy14) v2	cgybmedB176
MELO3C022667.2	Cucurbita maxima (Rimu)	cmamedB258
MELO3C022667.2	Cucurbita pepo (Zucchini)	cpemedB674
MELO3C022667.2	Silver-seed gourd	carmedB0212