MELO3C022451 (gene) Melon (DHL92) v3.5.1

NameMELO3C022451
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHfr-2-like protein
Locationchr11 : 30766887 .. 30767447 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGAGCTCGTTCGTTCACGAGAAATCTTCGATGTCGCGTTTCATCTCTCTGATGCGAAGATTCATAATCAAAGTGTTGTGGCGTTAGCAACTAAATCAGCTACAAATGGGACAGGAAAACCCACCAATGTAAAACTAAATATCCCATATACAAACACTTCATATTGTACATGGACTTCTATAATCTCAACAAAACAAGTAGAAGTGAAGACAGTAATCAAATCAGAAGTTCCTTTAATTGTGGATGGAAAAATATTCAGTACAGCAAGTGATTATTTTGGTGAATACAAATGGGGAGAAACTATATCAGAATCAGAAAATACAAATGGAATAACACATGAGGCAACTGTACCACCAATGAGCAATATTATTGGTACTTTGTATGCAACTAAGGGATCATTTGACATTCCCTTTTCATACAAACAATCTGATATCCTCTTCGCTGGGAACAATAACAATCCAGTTGAATTTTCCTTAGATGATGGTGTTTATCATGGCACCAACTACTACAACTTCCAATATGACATTAAAATTGTACCAATTAGTACTTCCATATAA

mRNA sequence

ATGACCGAGCTCGTTCGTTCACGAGAAATCTTCGATGTCGCGTTTCATCTCTCTGATGCGAAGATTCATAATCAAAGTGTTGTGGCGTTAGCAACTAAATCAGCTACAAATGGGACAGGAAAACCCACCAATGTAAAACTAAATATCCCATATACAAACACTTCATATTGTACATGGACTTCTATAATCTCAACAAAACAAGTAGAAGTGAAGACAGTAATCAAATCAGAAGTTCCTTTAATTGTGGATGGAAAAATATTCAGTACAGCAAGTGATTATTTTGGTGAATACAAATGGGGAGAAACTATATCAGAATCAGAAAATACAAATGGAATAACACATGAGGCAACTGTACCACCAATGAGCAATATTATTGGTACTTTGTATGCAACTAAGGGATCATTTGACATTCCCTTTTCATACAAACAATCTGATATCCTCTTCGCTGGGAACAATAACAATCCAGTTGAATTTTCCTTAGATGATGGTGTTTATCATGGCACCAACTACTACAACTTCCAATATGACATTAAAATTGTACCAATTAGTACTTCCATATAA

Coding sequence (CDS)

ATGACCGAGCTCGTTCGTTCACGAGAAATCTTCGATGTCGCGTTTCATCTCTCTGATGCGAAGATTCATAATCAAAGTGTTGTGGCGTTAGCAACTAAATCAGCTACAAATGGGACAGGAAAACCCACCAATGTAAAACTAAATATCCCATATACAAACACTTCATATTGTACATGGACTTCTATAATCTCAACAAAACAAGTAGAAGTGAAGACAGTAATCAAATCAGAAGTTCCTTTAATTGTGGATGGAAAAATATTCAGTACAGCAAGTGATTATTTTGGTGAATACAAATGGGGAGAAACTATATCAGAATCAGAAAATACAAATGGAATAACACATGAGGCAACTGTACCACCAATGAGCAATATTATTGGTACTTTGTATGCAACTAAGGGATCATTTGACATTCCCTTTTCATACAAACAATCTGATATCCTCTTCGCTGGGAACAATAACAATCCAGTTGAATTTTCCTTAGATGATGGTGTTTATCATGGCACCAACTACTACAACTTCCAATATGACATTAAAATTGTACCAATTAGTACTTCCATATAA

Protein sequence

MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWTSIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPPMSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIKIVPISTSI*
BLAST of MELO3C022451 vs. TrEMBL
Match: A0A0A0K956_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080920 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.6e-80
Identity = 154/186 (82.80%), Postives = 165/186 (88.71%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           MTELVRSREIFDV+FHLSDAKI+NQSVV LATKSATNGTG+PTNV+LNIPYT+T+Y TWT
Sbjct: 300 MTELVRSREIFDVSFHLSDAKIYNQSVVVLATKSATNGTGEPTNVRLNIPYTHTTYRTWT 359

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPP 120
           S IS K VEVKT IKS VPLI+DG   ST   +FGEYKWGET S+SENTNGITHE TVP 
Sbjct: 360 SSISKKLVEVKTRIKSGVPLILDGNAISTTCKFFGEYKWGETTSKSENTNGITHELTVPA 419

Query: 121 MSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIKIV 180
           MS+IIGTLYATKGS DIPFSYKQSDIL AGNNN  VEFSLDDGVYHGTNYYNF YD+KIV
Sbjct: 420 MSSIIGTLYATKGSCDIPFSYKQSDILLAGNNNQ-VEFSLDDGVYHGTNYYNFHYDVKIV 479

Query: 181 PISTSI 187
           PISTSI
Sbjct: 480 PISTSI 484

BLAST of MELO3C022451 vs. TrEMBL
Match: D7U3H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           + ELV SR I++V F L DA+I++Q V+ + T  A N T +P   ++ + YT T   TW 
Sbjct: 290 VAELVLSRNIYNVNFRLMDARIYDQRVIIMTTGEAINMTHEPHTQQVKLSYTETKSRTWK 349

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGIT-HEATVP 120
             +S K + VK  ++S VP I DGK+   +S++ G Y+WG T  ES  T   T +  TVP
Sbjct: 350 GSVSLK-LGVKITMESGVPFIADGKL-EISSEFSGTYEWGGT--ESVTTAMETLYNVTVP 409

Query: 121 PMSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIK 179
            M+ +  ++ AT+GS D+PFSY Q D L  G N   V +++DDGVY+G N +N +Y  K
Sbjct: 410 AMTRVTVSMIATQGSCDVPFSYSQRDTLTDGKN---VIYNMDDGVYNGVNCFNVKYQTK 461

BLAST of MELO3C022451 vs. TrEMBL
Match: A5AYS3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020655 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-26
Identity = 75/180 (41.67%), Postives = 105/180 (58.33%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           + ELV SR I++V F L DA+I++Q V+ + T  A N T +P   ++ + YT T   TW 
Sbjct: 291 VAELVLSRNIYNVNFRLMDARIYDQRVIVMTTGGAINMTHEPHTQQVKLSYTETKSRTWK 350

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKI-FSTASDYFGEYKWGETISESENTNGIT-HEATV 120
             +S K   VK  I+S VP I DGK+  S+     G Y+WGET  ES  T   T +  TV
Sbjct: 351 GSVSLKS-GVKITIESGVPFIADGKLEVSSEFSGTGTYEWGET--ESLTTAXETVYSVTV 410

Query: 121 PPMSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIK 179
           P  + +  ++ AT+GS+D+PFSY Q D L  G N   V +++DDGVY G N +N +Y  K
Sbjct: 411 PARTRVTISMIATQGSYDVPFSYTQRDTLTDGQN---VVYNMDDGVYVGVNCFNVEYQTK 464

BLAST of MELO3C022451 vs. TrEMBL
Match: F6HZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-26
Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           + ELV SR I++V F L DA+I++QSV+ + T  A N T +P   ++ + YT T   TW 
Sbjct: 290 VAELVLSRNIYNVNFRLMDARIYDQSVIVMTTAEAINRTHEPHTQQVKLSYTETKSSTWK 349

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGIT-HEATVP 120
             +S K + VK  ++S VP I +GK+   +S++ G Y+WGET  ES  T   T +  TVP
Sbjct: 350 GSVSLK-LGVKITMESGVPFIANGKL-EISSEFSGAYEWGET--ESVTTAMETMYNVTVP 409

Query: 121 PMSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIK 179
            M+ +  ++  TKGS D+PFSY Q D L  G     V  ++DDGVY G N +N +Y+ K
Sbjct: 410 AMTRVTVSMIGTKGSCDVPFSYTQRDTLTDG---KIVVDNMDDGVYVGVNCFNVKYETK 461

BLAST of MELO3C022451 vs. TrEMBL
Match: A0A0D9XHI4_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-26
Identity = 65/181 (35.91%), Postives = 105/181 (58.01%), Query Frame = 1

Query: 3   ELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWTSI 62
           E V SR+I+   +HL DAK++N   + +A+  A N + K    K+ I Y +T   +W + 
Sbjct: 362 EAVLSRKIYGAEYHLEDAKMYNHKALIMASSHAVNRSSKDNTAKMTIKYGSTRQSSWNAT 421

Query: 63  ISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPPMS 122
           +S K + VK  ++  VPLI  GK+  T  ++ G Y+WG T++ SE  + + ++ TVPP  
Sbjct: 422 VSLK-LGVKITVEIGVPLISSGKV-ETQLEFSGSYQWGSTVTSSEE-HSVDYDITVPPNK 481

Query: 123 NIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIKIVPI 182
            +  ++ AT+ + D+PFSY Q D+L  G         L+DG+Y G N Y+F YD+K  P+
Sbjct: 482 AVKLSVLATQATCDVPFSYYQEDVLTDGTTR---VSKLNDGIYRGINSYDFTYDVKEEPL 536

Query: 183 S 184
           +
Sbjct: 542 T 536

BLAST of MELO3C022451 vs. NCBI nr
Match: gi|659120444|ref|XP_008460197.1| (PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-101
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT
Sbjct: 246 MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 305

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPP 120
           SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPP
Sbjct: 306 SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPP 365

Query: 121 MSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIKIV 180
           MSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIKIV
Sbjct: 366 MSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIKIV 425

Query: 181 PISTSI 187
           PISTSI
Sbjct: 426 PISTSI 431

BLAST of MELO3C022451 vs. NCBI nr
Match: gi|449454680|ref|XP_004145082.1| (PREDICTED: uncharacterized protein LOC101206536 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 2.3e-80
Identity = 154/186 (82.80%), Postives = 165/186 (88.71%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           MTELVRSREIFDV+FHLSDAKI+NQSVV LATKSATNGTG+PTNV+LNIPYT+T+Y TWT
Sbjct: 300 MTELVRSREIFDVSFHLSDAKIYNQSVVVLATKSATNGTGEPTNVRLNIPYTHTTYRTWT 359

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPP 120
           S IS K VEVKT IKS VPLI+DG   ST   +FGEYKWGET S+SENTNGITHE TVP 
Sbjct: 360 SSISKKLVEVKTRIKSGVPLILDGNAISTTCKFFGEYKWGETTSKSENTNGITHELTVPA 419

Query: 121 MSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIKIV 180
           MS+IIGTLYATKGS DIPFSYKQSDIL AGNNN  VEFSLDDGVYHGTNYYNF YD+KIV
Sbjct: 420 MSSIIGTLYATKGSCDIPFSYKQSDILLAGNNNQ-VEFSLDDGVYHGTNYYNFHYDVKIV 479

Query: 181 PISTSI 187
           PISTSI
Sbjct: 480 PISTSI 484

BLAST of MELO3C022451 vs. NCBI nr
Match: gi|694401999|ref|XP_009376017.1| (PREDICTED: uncharacterized protein LOC103964769 [Pyrus x bretschneideri])

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-28
Identity = 69/176 (39.20%), Postives = 112/176 (63.64%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           + E+V SR I++V + + DA+++NQ+VV +AT  A N T +   +++ + Y NT    W 
Sbjct: 298 LEEVVVSRSIYNVNYRVLDARVYNQTVVTMATGEALNRTKEQNTIEMKLSYKNTRSSVWN 357

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPP 120
           + +S K + +KT +++ VPLI +GKI   +++    ++WGET   SE+     ++ TVPP
Sbjct: 358 TSVSLK-LGIKTTLEAGVPLIENGKI-EVSAEVGAGFQWGET-ETSESVVETVYKVTVPP 417

Query: 121 MSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYD 177
           M+ +  ++ AT+G+ D+PFSY Q D+L  G  N    +++DDGVY G N YNFQYD
Sbjct: 418 MTRVKESMLATRGACDVPFSYTQRDVLTNGKQN---IYNMDDGVYTGVNNYNFQYD 467

BLAST of MELO3C022451 vs. NCBI nr
Match: gi|225465417|ref|XP_002264098.1| (PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera])

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = 1

Query: 1   MTELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWT 60
           + ELV SR I++V F L DA+I++Q V+ + T  A N T +P   ++ + YT T   TW 
Sbjct: 290 VAELVLSRNIYNVNFRLMDARIYDQRVIIMTTGEAINMTHEPHTQQVKLSYTETKSRTWK 349

Query: 61  SIISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGIT-HEATVP 120
             +S K + VK  ++S VP I DGK+   +S++ G Y+WG T  ES  T   T +  TVP
Sbjct: 350 GSVSLK-LGVKITMESGVPFIADGKL-EISSEFSGTYEWGGT--ESVTTAMETLYNVTVP 409

Query: 121 PMSNIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYDIK 179
            M+ +  ++ AT+GS D+PFSY Q D L  G N   V +++DDGVY+G N +N +Y  K
Sbjct: 410 AMTRVTVSMIATQGSCDVPFSYSQRDTLTDGKN---VIYNMDDGVYNGVNCFNVKYQTK 461

BLAST of MELO3C022451 vs. NCBI nr
Match: gi|645281008|ref|XP_008245436.1| (PREDICTED: uncharacterized protein LOC103343557 [Prunus mume])

HSP 1 Score: 127.1 bits (318), Expect = 3.2e-26
Identity = 71/174 (40.80%), Postives = 108/174 (62.07%), Query Frame = 1

Query: 3   ELVRSREIFDVAFHLSDAKIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWTSI 62
           ELV SR I++V F L D++I++Q VV++AT  A N T +   + L + Y ++   TW S 
Sbjct: 297 ELVVSRSIYNVNFRLLDSRIYSQRVVSMATGDAVNRTQEENTIDLRLSYKDSRSSTWNSS 356

Query: 63  ISTKQVEVKTVIKSEVPLIVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPPMS 122
           +S K + + T +++ VPLI  G+I   ++++  E++WGET + SE+     +   VPPMS
Sbjct: 357 VSMK-LGLSTKVQTGVPLIAKGEI-EISTEFATEFQWGET-NTSESEVETVYRVVVPPMS 416

Query: 123 NIIGTLYATKGSFDIPFSYKQSDILFAGNNNNPVEFSLDDGVYHGTNYYNFQYD 177
            +  +L AT+GS D+PFSY Q D L    N   V  ++DDGVY G N YNF+Y+
Sbjct: 417 MVKVSLMATRGSCDVPFSYTQRDTLI---NGTTVTQTMDDGVYTGVNSYNFKYE 464

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K956_CUCSA1.6e-8082.80Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080920 PE=4 SV=1[more]
D7U3H5_VITVI1.3e-2641.34Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=... [more]
A5AYS3_VITVI5.0e-2641.67Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020655 PE=4 SV=1[more]
F6HZZ6_VITVI5.0e-2641.34Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=... [more]
A0A0D9XHI4_9ORYZ5.0e-2635.91Uncharacterized protein OS=Leersia perrieri PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659120444|ref|XP_008460197.1|1.0e-101100.00PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo][more]
gi|449454680|ref|XP_004145082.1|2.3e-8082.80PREDICTED: uncharacterized protein LOC101206536 [Cucumis sativus][more]
gi|694401999|ref|XP_009376017.1|2.0e-2839.20PREDICTED: uncharacterized protein LOC103964769 [Pyrus x bretschneideri][more]
gi|225465417|ref|XP_002264098.1|1.9e-2641.34PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera][more]
gi|645281008|ref|XP_008245436.1|3.2e-2640.80PREDICTED: uncharacterized protein LOC103343557 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023307Aerolysin-like toxin, beta complex domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022451T1MELO3C022451T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023307Aerolysin-like toxin, beta complex domainGENE3DG3DSA:2.170.15.10coord: 7..178
score: 1.4
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 1..183
score: 3.2
NoneNo IPR availableunknownSSF56973Aerolisin/ETX pore-forming domaincoord: 26..178
score: 4.4

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C022451Cp4.1LG17g10960Cucurbita pepo (Zucchini)cpemeB288
The following gene(s) are paralogous to this gene:

None