MELO3C022386 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022386
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	50S ribosomal protein L14
Location	chr11 : 30301448 .. 30304098 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGCATATAAAACTAAATGCTGATGCTTCTGTTATAGCGGCCGCGGGAGAGAAGCCAAAATCCATCGACAATGTCGAAGCGAGGTCTTCTTCTTCTTCTTTTCTTCTTTACTGCTTGTTCTCCAATGCCGTCTTGTTGGTCAAAATGATTTTACTTACTCTGTTGTTAGTATCATTTAATGAATCGTTGGAACTAATTTGGTTGCTATCACAGGAAGGGGAGGGTCCGCTGGGAATAAGTTTCGTATGTCACTGGGTCTTCCAGTGGCTGCTACTGTCAACTGTGCAGACAACACGGGAGCTAAGAATCTCTACATCATTTCCGTGAAAGGGATCAAGGGTCGTCTTAATAGGTTACCATCCGCATGTGTTGGTGATATGGTTATGGCTACTGTCAAGAAAGGCAAGCCTGATCTCAGGAAGAAGGTCTTGCCTGCTGTTATTGTTAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGCGTCTTCATGTATTTCGAAGGTTTGCCTATTTTCATCCTTTCCCTATTTGGTTTTTCGGCGTTGTTGTTTGTTTCTGCTCCGTTGAATGGAGGAGGATCTTGTTTAACTTACTTGGGTGGGAAGTCATTATGGGTGTTGAATTAGGACTATTCGCGATACTATTCGTTGGGTTATTTGTGTTATCTGTGGGTTTGAATTGGAATTTCTTAAGTTTAGCTTTCTCTTTGCTGTTAGTTTGGTCGTTTATCTCATTACTGGGAAAATTTATATAGAATTTGGCTGCGTAGTGTCTAATTACTTTTCTTTTATGAAGGCCTTATGGTGTGTTGTTGTTCTTGTTTTTTTTTTTTTTTTATTGAAATAAGTTGTCCCTTTTTTCCAATATGTATTTTAATGGTTATCCATTTGATTAATGAGCATTATGTGTAAACGCCATTTTAAGACTATGGCAACCATTTTTCTTTCAGTATATGCTAGGTTCTAGAATTTGTAAGATTGTAGAAAGATGAATTTGTCTAAGTTTATGAGAAAGGGTTGCTACTCACTTTTATTTTGTAGTTTGATTGGGTATAATCTGGATCCCATTAGGATGGTTTATGTTCTTTTTCTGCATTCACAAACAATTCTCTCTTGGAAATTGGACATGATTTTTTTCATACTTTAATTGGGACTGTTCCATTGTAATTTGGAGTCTTTGTTTTTTTCTTTCTGAGATTCTTATATCTCTGAAATGTTGGCTGGGTAAGTAACGCAATTTATCCCTTTTTGATCACGAAGTTTGCTGGACAATTGATTGTTACGTAGTGAATAGGATGATTGTATTGGTTTCAAATGTAAATTCTTTCCACTATAAACCATTACAACTTGTTCTTGTGTTTTTCTTATTTGTATCGTATTTTTTTCCTTCAGATAATGCTGGTGTTATCGTCAATCCCAAGGGCGAAATGAAAGGTAATGTTTATTTATTTTTCTATTTTTCAAAATATTATTTCTATACCAACGAGTGTTTCGGTCAGCTTAGAATGCAATGCTCTCTAGGGCCCTAGGCTATTAGTATATGATGCCTTTGCGACATGTCACATAAGATGGTATTTATCATGAAAGCCTTGAAATTTGACAAAGGCAATTCTGGTTGGAAAATCCGAAGCTCGCCTAGTAGTTTCCACTAACCAGTAGGTGCAGATTGTAAGAAGCAATGTGCACGGTGAAACATTATTTTTAGAAATTTAGAACATGCACACGGCAAGTTTAGTGTTTGATACATGTTCATCAAATGTTAAATGGCACCTATTATGGTGACAAGTGTCTAATGTGTGCGGAACATGTGTTGGAGTGTGTCCAAGTGTCGGGCATGGATACTAGTAAAACTAGAGTACTAGCTGCCAGTTTTGACATCGACAACACCACATTATATGGTAAACAAAAAACGAATGGTCTTCCATGAAATCTAGTTATCATTTATGGTGAACCGTTATGTGCTTTGGTTGGATAGCAACCCCCTCTCTATTTCAGAGATTAATGATGGTTGTGCATTTGATTGCAGGTTCAGCAATTACTGGCCCCATCGGAAAGGAATGTGCTGATCTCTGGCCGAGGATTGCAAGTGCAGCGAATGCCATCGCGTGAGAGTCAAAGCCATTATAGTGTCATGCAATGTTTTAGATTTTCTTCTAGTCTTCTTTTGGTTGGGTTTGCCTCTGCTTTGTTAGACACTGATGCAAGCTCGTTTTTTAGTTTTCTTAATCTTACTGGATAGCTCAAGTTTAAATTGGTGTTGCCATTTTCTCCTTTCTGTTTCATCAACTCTTGCAGTTTTTGCTATAGATACGAAGGATGCATGTTTTATAACGTTAATATTTGAAGAAGCATTAGAAAGTTCCTGTCGTCCATCACTGCTCTTGTTGGGAAAGTTCTATTCTAAATCAACCCATGAAGATTGACGAGAATATTATTATTATCACCATTTTGAAATCATAGTTTATTGGTGGGATGTTTTTGAGGTTAGGTTAGGTGACATTTTCAGAAGAGGTTTTCCTCGTTGATTGGTTGTGATGTAGTTATTTGAAAGTAGAGGCTACACCAACATTGATTTGTTTCTATGAGTTCTATAAAACTATTTGATTCATAGTGTATTTGAACTTATGAAAAATTATAGAGAAATACGATAGATT

mRNA sequence

AATGCATATAAAACTAAATGCTGATGCTTCTGTTATAGCGGCCGCGGGAGAGAAGCCAAAATCCATCGACAATGTCGAAGCGAGGAAGGGGAGGGTCCGCTGGGAATAAGTTTCGTATGTCACTGGGTCTTCCAGTGGCTGCTACTGTCAACTGTGCAGACAACACGGGAGCTAAGAATCTCTACATCATTTCCGTGAAAGGGATCAAGGGTCGTCTTAATAGGTTACCATCCGCATGTGTTGGTGATATGGTTATGGCTACTGTCAAGAAAGGCAAGCCTGATCTCAGGAAGAAGGTCTTGCCTGCTGTTATTGTTAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGCGTCTTCATGTATTTCGAAGATAATGCTGGTGTTATCGTCAATCCCAAGGGCGAAATGAAAGGTTCAGCAATTACTGGCCCCATCGGAAAGGAATGTGCTGATCTCTGGCCGAGGATTGCAAGTGCAGCGAATGCCATCGCGTGAGAGTCAAAGCCATTATAGTGTCATGCAATGTTTTAGATTTTCTTCTAGTCTTCTTTTGGTTGGGTTTGCCTCTGCTTTGTTAGACACTGATGCAAGCTCGTTTTTTAGTTTTCTTAATCTTACTGGATAGCTCAAGTTTAAATTGGTGTTGCCATTTTCTCCTTTCTGTTTCATCAACTCTTGCAGTTTTTGCTATAGATACGAAGGATGCATGTTTTATAACGTTAATATTTGAAGAAGCATTAGAAAGTTCCTGTCGTCCATCACTGCTCTTGTTGGGAAAGTTCTATTCTAAATCAACCCATGAAGATTGACGAGAATATTATTATTATCACCATTTTGAAATCATAGTTTATTGGTGGGATGTTTTTGAGGTTAGGTTAGGTGACATTTTCAGAAGAGGTTTTCCTCGTTGATTGGTTGTGATGTAGTTATTTGAAAGTAGAGGCTACACCAACATTGATTTGTTTCTATGAGTTCTATAAAACTATTTGATTCATAGTGTATTTGAACTTATGAAAAATTATAGAGAAATACGATAGATT

Coding sequence (CDS)

ATGTCGAAGCGAGGAAGGGGAGGGTCCGCTGGGAATAAGTTTCGTATGTCACTGGGTCTTCCAGTGGCTGCTACTGTCAACTGTGCAGACAACACGGGAGCTAAGAATCTCTACATCATTTCCGTGAAAGGGATCAAGGGTCGTCTTAATAGGTTACCATCCGCATGTGTTGGTGATATGGTTATGGCTACTGTCAAGAAAGGCAAGCCTGATCTCAGGAAGAAGGTCTTGCCTGCTGTTATTGTTAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGCGTCTTCATGTATTTCGAAGATAATGCTGGTGTTATCGTCAATCCCAAGGGCGAAATGAAAGGTTCAGCAATTACTGGCCCCATCGGAAAGGAATGTGCTGATCTCTGGCCGAGGATTGCAAGTGCAGCGAATGCCATCGCGTGA

Protein sequence

MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIA*

Homology

[Close]

BLAST of MELO3C022386 vs. Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3)

HSP 1 Score: 280.0 bits (715), Expect = 1.4e-74
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 7.0e-74
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. Swiss-Prot
Match: RL23_TORRU (60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 9.8e-68
Identity = 126/139 (90.65%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDM
Sbjct: 1   MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM  SAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 138

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BLAST of MELO3C022386 vs. Swiss-Prot
Match: RL23_DANRE (60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.0e-64
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIA 141
           + KECADLWPRIAS A +IA
Sbjct: 121 VAKECADLWPRIASNAGSIA 140

[Close]

BLAST of MELO3C022386 vs. Swiss-Prot
Match: RL23_BOVIN (60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-63
Identity = 119/140 (85.00%), Postives = 128/140 (91.43%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIA 141
           + KECADLWPRIAS A +IA
Sbjct: 121 VAKECADLWPRIASNAGSIA 140

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BLAST of MELO3C022386 vs. TrEMBL
Match: A0A0A0LNL7_CUCSA (Ribosomal protein L17 OS=Cucumis sativus GN=Csa_2G171870 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIA 141
           IGKECADLWPRIASAANAIA
Sbjct: 121 IGKECADLWPRIASAANAIA 140

[Close]

BLAST of MELO3C022386 vs. TrEMBL
Match: V7BH47_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G164200g PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. TrEMBL
Match: M5WP13_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013088mg PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. TrEMBL
Match: Q9ATF6_CASSA (Ribosomal protein L17 OS=Castanea sativa PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. TrEMBL
Match: I3S209_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. TAIR10
Match: AT1G04480.1 (AT1G04480.1 Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 280.0 bits (715), Expect = 7.9e-76
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. TAIR10
Match: AT2G33370.1 (AT2G33370.1 Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 280.0 bits (715), Expect = 7.9e-76
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. TAIR10
Match: AT3G04400.1 (AT3G04400.1 Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 280.0 bits (715), Expect = 7.9e-76
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. TAIR10
Match: ATCG00780.1 (ATCG00780.1 ribosomal protein L14)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 1


Query: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIV
Sbjct: 8   LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 67

Query: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAA 137
           R  K  +R +G  + ++DNA V+++ +G  KG+ + G I +E   L + +I S A
Sbjct: 68  RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLA 118

[Close]

BLAST of MELO3C022386 vs. NCBI nr
Match: gi|449445630|ref|XP_004140575.1| (PREDICTED: 60S ribosomal protein L23 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIA 141
           IGKECADLWPRIASAANAIA
Sbjct: 121 IGKECADLWPRIASAANAIA 140

[Close]

BLAST of MELO3C022386 vs. NCBI nr
Match: gi|470120643|ref|XP_004296407.1| (PREDICTED: 60S ribosomal protein L23 [Fragaria vesca subsp. vesca])

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. NCBI nr
Match: gi|568215140|ref|NP_001274965.1| (ribosomal protein L17-like protein [Solanum tuberosum])

HSP 1 Score: 281.6 bits (719), Expect = 7.7e-73
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

[Close]

BLAST of MELO3C022386 vs. NCBI nr
Match: gi|629094248|gb|KCW60243.1| (hypothetical protein EUGRSUZ_H02959 [Eucalyptus grandis])

HSP 1 Score: 281.6 bits (719), Expect = 7.7e-73
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 72  MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 131

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 132 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 191

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 192 IGKECADLWPRIASAANAI 210

[Close]

BLAST of MELO3C022386 vs. NCBI nr
Match: gi|470107295|ref|XP_004289983.1| (PREDICTED: 60S ribosomal protein L23-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 281.6 bits (719), Expect = 7.7e-73
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKVLPAV+VRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAI 140
           IGKECADLWPRIASAANAI
Sbjct: 121 IGKECADLWPRIASAANAI 139

The following BLAST results are available for this feature:

BLAST of MELO3C022386 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL23_ARATH	1.4e-74	98.56	60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3	[more]
RL23_TOBAC	7.0e-74	97.12	60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1	[more]
RL23_TORRU	9.8e-68	90.65	60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1	[more]
RL23_DANRE	5.0e-64	85.71	60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1	[more]
RL23_BOVIN	1.1e-63	85.00	60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2	[more]

BLAST of MELO3C022386 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNL7_CUCSA	1.1e-73	100.00	Ribosomal protein L17 OS=Cucumis sativus GN=Csa_2G171870 PE=3 SV=1	[more]
V7BH47_PHAVU	3.2e-73	100.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G164200g PE=3 SV=1	[more]
M5WP13_PRUPE	3.2e-73	100.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013088mg PE=3 SV=1	[more]
Q9ATF6_CASSA	3.2e-73	100.00	Ribosomal protein L17 OS=Castanea sativa PE=2 SV=1	[more]
I3S209_LOTJA	3.2e-73	100.00	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of MELO3C022386 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04480.1	7.9e-76	98.56	Ribosomal protein L14p/L23e family protein	[more]
AT2G33370.1	7.9e-76	98.56	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.1	7.9e-76	98.56	Ribosomal protein L14p/L23e family protein	[more]
ATCG00780.1	1.1e-11	34.78	ATCG00780.1 ribosomal protein L14	[more]

BLAST of MELO3C022386 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445630\|ref\|XP_004140575.1\|	1.6e-73	100.00	PREDICTED: 60S ribosomal protein L23 [Cucumis sativus]	[more]
gi\|470120643\|ref\|XP_004296407.1\|	4.5e-73	100.00	PREDICTED: 60S ribosomal protein L23 [Fragaria vesca subsp. vesca]	[more]
gi\|568215140\|ref\|NP_001274965.1\|	7.7e-73	99.28	ribosomal protein L17-like protein [Solanum tuberosum]	[more]
gi\|629094248\|gb\|KCW60243.1\|	7.7e-73	99.28	hypothetical protein EUGRSUZ_H02959 [Eucalyptus grandis]	[more]
gi\|470107295\|ref\|XP_004289983.1\|	7.7e-73	98.56	PREDICTED: 60S ribosomal protein L23-like [Fragaria vesca subsp. vesca]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006412	translation
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0006554	lysine catabolic process
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45829	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022386T1	MELO3C022386T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45829	MU45829	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C022386	Csa6G088070	Cucumber (Chinese Long) v2	cumeB442
MELO3C022386	Cla007069	Watermelon (97103) v1	mewmB140
MELO3C022386	ClCG06G001470	Watermelon (Charleston Gray)	mewcgB124
MELO3C022386	Cla97C06G110770	Watermelon (97103) v2	mewmbB127
MELO3C022386	CSPI06G07050	Wild cucumber (PI 183967)	cpimeB433
MELO3C022386	Cucsa.348930	Cucumber (Gy14) v1	cgymeB564
MELO3C022386	CmaCh08G000390	Cucurbita maxima (Rimu)	cmameB817
MELO3C022386	CmoCh08G000400	Cucurbita moschata (Rifu)	cmomeB801
MELO3C022386	Lsi09G017960	Bottle gourd (USVL1VR-Ls)	lsimeB017
MELO3C022386	Cp4.1LG17g09530	Cucurbita pepo (Zucchini)	cpemeB284
MELO3C022386	CsGy6G007060	Cucumber (Gy14) v2	cgybmeB379
MELO3C022386	Carg11543	Silver-seed gourd	carmeB0010
MELO3C022386	Carg03791	Silver-seed gourd	carmeB0951
MELO3C022386	CsaV3_6G007430	Cucumber (Chinese Long) v3	cucmeB444

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022386	Cucurbita pepo (Zucchini)	cpemeB114
MELO3C022386	Cucumber (Chinese Long) v3	cucmeB182
MELO3C022386	Wax gourd	mewgoB099
MELO3C022386	Cucurbita maxima (Rimu)	cmameB315
MELO3C022386	Cucurbita moschata (Rifu)	cmomeB308
MELO3C022386	Watermelon (97103) v1	mewmB100