MELO3C022199 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022199
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA-directed RNA polymerase subunit beta
Location	chr9 : 327101 .. 330737 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGCCAATTTTCAACGGTTGTGTGATGGAAGTGAAGGTGAGGCAGAGAAATAGAGCACACCGTTTTTCTCTTCTTCCACACCCAACTCTTCCTTCTCTAACTCTTAGTCTCAGGTACTTCGCTATTCCCTTAAAATCTCTCTTTAACATACCCATTACTCATAAACTTTGCTTTTTCTGCTTTTTTTCCCCTCCAATTTCTATCCCAGAAATTGGGCCAACACCAAAAAGTCATTCAACAACCAACTCAGAGGCATTTCTCTGGTATGTTTGCTCTCCATTCAACTTGGGCTCTGTATTCCTTTGTTTTATCACATACCCAGATATTGAATAGTCACTTATGGTTTGAATTTCTTTTGAATATTCACTTTTTTTAGTATGTTTTGGGATTATAAAGAATGAGTTTGTGATTAATGGTTAATCTGTGCTCATTTTGGCAGAGATGGAGGTTTCAACTTCTGGATGTATCCAAACATCAACTCTCCACCAAACACCACTTTGTTCATATTTTAGAAGGGTAACAGGAAAAATAAATATTAGTTACTCTGCTTTAAGAATTTGATAGTACCTGAACTGAAATGTGTTTTTTCCATCCTCAATTACTTTCCTTTTTCTACGGTGACTCTCATTTGTCAAGAACATGAGGTTACGTTTGTGCTTGATTTTCAGTTTAACCACTCAAAATCAGTCAACTATTTGATTTTACACTTGTATACGCAATTTTCATGCACAGATTTGTTTCTAGTTCCACAGTGGAGTTACCAATTGAAGTGATTCTACACTTCTTGTGGGATTCTACTAAGCTAGAAAAAGTGGAGTTTTATCGATAAATATACAAACTTTAATAGTGAATATCGTTGAAGTTAGTAAAGTTGAGTTATTTAACATCGACTAACTCGTGAAATTGGTGGGTCAAATAATGAGTTGGTTATTTTAATTGACTCAAGTCAGAGTGGTAGACCAAACACCCACTTTAGTTGTCAATGTAATCATACGTTGTTTGCTGTTCAAAGACTCAAATCAGTCATATGGGGAATCACATTAAAATGAGTTAGTACTTAAGGAAATTCGTTGAATTTCATTTCAAATTTATTACTGTTTCATCTAAGTGTTAAGATGTCAATTGGTAGGAACGAGAGCTTAGCTTCAATTTCAAACAAGAATGGAGATCCCCCAAATTCCATTGTCATAGATAATAAGAAGATAGTGGACACGGATCCAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCGAGTAGTAAGCAAGGTTGCACTTTTTTCTCACTTCTAAGCAATATTCTAAACTCCTCTGCAGGTTTTCTTTTGTGACTTTACTTTTTGAGGTTTCTACTTCTATCTTCTTGTTGAATCACTTCAGAAAGAAATTGATAGCTCAAAGCTTTTTTGTAGGAGTCATTTTCCCAACTTTGATATCATGGTTGGTTATATAGTCTAAATGATGATTACTTATGGAATTTAGTTTATCTATTTTGCAATGTATTCACTAATAATGGGTGCTAGAAACTATAAGATAGTTGCAAACTAATTATTGAATGTTCAAATCTTCCCACATGAGACAAATCTCACGTGTCTCTAACAACCAAATTTCTTGAGTTGGGTTCATAATTTCCAAAACTCTATAATACTTGAAGAATTGACGAAAGCACTTGAACCATTCTGAACTGCAATTTATGACCGTATCCTGAGTAGTAAAGAGCATTGTTATCAGTTCAAGATCGAATTACTCTTGTTCTTGGCTCCTTTCTTATGTTCTACATAATCACTACAGATTAGAGATGCGTTTCAATTAGAAGAAAAGCTCCAAAATGCTTTGAATGGACTTCAAATCTATAAGAAGCTTTTTGCGCTAGCCTCCTCTCGTCTACCTCCTGTAAATTTCTTTTTCTCACCAGAAGTAATATATTCTTTCATTAAGAGTTATGTCTAAACCAAACATATCATATCTACATACTTATTTGGATACTTCTTTGACGTTTATCTAGAGAAATGATAATTCAACAAACTTATTTGTTCTCTTTTTTCATTTTTTCCCTGTCAGGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTGTAATATTTTGTACCAGATGCATAATTGGTGCTTCTTATGCTAGAGTTTTTGGAACATTGAAGCTTAAAGCCATTAATAAACAAGAGGGAGAACGTCACAAGTTTAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGAGAATTGGATGGTTTGGATTGTGAGGCCCCCATAGATTCTACTGTAAGTAACGTAACTTCATGCTCCTACTTTTACCCCAGTTCACCCACCCTTATATGAAGTTTTTCTTTAGAGTGTTTTCTTGAGCATGATGTAATTAGATTTCTTATAATAAATGAGGCAGAGGTAATGTAATACTTGCTAATGGGAGCAAAATTGACTACTACTGAAGTTGTTGAATTGTTGCTTTCATTTGTTTGAGCACCCATCACACCGTGCCTTTAAAAGCTTATCATTCAATTTTGTCTACTCCTAACGGAGTTCTCTGGCCATCCACTTCCCTTTCTTCTGGTTAGCCTCATCTTTTTGTTTCAACCAGATGATAATACTGCCAAAATGGTAAACTATCTTCAGATAACAACATTGGATTTCCACATGGGAGTGGTGACCACTGACCACTGACCACTAAACTAAGAAGGGAACAGGGCAGAAACATGTTACTGAGAGTGGGTTTAAAATGGCCAGAAAAACGTGGCACAACCTTATTTGAATCAAATCTCTTCTATAGGTTGTGCAATTGAACTTCTTCTCTAGGTTATACAATTATGTTCTTGAGTTAAAACAAGAGAGGAGCCAAAATTTGGTGGATGGAACCATTGCCTTGTGGCTAGAGCGTGATTAATGGTTTAATGGACCTTGGTTCTGCGGCTCTAGAGGATCGTTAACTAGGTTATCTAATCTTGCGCTGTTGTTACAGATTGGAAAGAGAGATGCATCTATTAGCTTGATTCAAGCTTTTGAGAGTTATCATTTGTCTTCTAGTCTCCTTCCAAGTCAAAAGTTCACAATTTGATAACAGTTCATGGTTTTTGTTTTGCAGAGTCCTTCAGAAGATGAGCAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTAGACCAGGATTATGAAAAATTTCTATCAGAATGTGGACTAAGTAAATGGGGCTACTGGCGTGGGGGTACCCAAAGACCTGAGCAGGAATAGGCAATGTTTGTAGAACTTATATGAGTTTCCTTGCCAGCCAACAGGGGGTAGGCTATGGAGCTGTGAGTTCTAGTAGAAAGAAGCATAGCAACAGTTTTTCACGTGTATTCTGATAGACTAGATTTTCAACAACCCAACTGATGTAATTAAACTTGAAGTTGAACAAAATTTATGCATAATGCAGCATCCCATTTACAACTCTTCACAATGTTTGAATCCAAATACACTTGATTAAAGAAATTCATCAAACTTCCAGCCATATCCCTTCTCCAATTAACGAACACGGCGAGCTTTCTCTTCCTGCCCCAGTCCAAGTGATTTCTGAGCATTTGCAATACCTTCAGGGTCTGGTATGGGATCAAATGTGTTAGTGAACAAAATATTG

mRNA sequence

AGGCCAATTTTCAACGGTTGTGTGATGGAAGTGAAGGTGAGGCAGAGAAATAGAGCACACCGTTTTTCTCTTCTTCCACACCCAACTCTTCCTTCTCTAACTCTTAGTCTCAGAAATTGGGCCAACACCAAAAAGTCATTCAACAACCAACTCAGAGGCATTTCTCTGAGATGGAGGTTTCAACTTCTGGATGTATCCAAACATCAACTCTCCACCAAACACCACTTTGTTCATATTTTAGAAGGGAACGAGAGCTTAGCTTCAATTTCAAACAAGAATGGAGATCCCCCAAATTCCATTGTCATAGATAATAAGAAGATAGTGGACACGGATCCAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCGAGTAGTAAGCAAGATTAGAGATGCGTTTCAATTAGAAGAAAAGCTCCAAAATGCTTTGAATGGACTTCAAATCTATAAGAAGCTTTTTGCGCTAGCCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTGTAATATTTTGTACCAGATGCATAATTGGTGCTTCTTATGCTAGAGTTTTTGGAACATTGAAGCTTAAAGCCATTAATAAACAAGAGGGAGAACGTCACAAGTTTAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGAGAATTGGATGGTTTGGATTGTGAGGCCCCCATAGATTCTACTAGTCCTTCAGAAGATGAGCAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTAGACCAGGATTATGAAAAATTTCTATCAGAATGTGGACTAAGTAAATGGGGCTACTGGCGTGGGGGTACCCAAAGACCTGAGCAGGAATAGGCAATGTTTGTAGAACTTATATGAGTTTCCTTGCCAGCCAACAGGGGGTAGGCTATGGAGCTGTGAGTTCTAGTAGAAAGAAGCATAGCAACAGTTTTTCACGTGTATTCTGATAGACTAGATTTTCAACAACCCAACTGATGTAATTAAACTTGAAGTTGAACAAAATTTATGCATAATGCAGCATCCCATTTACAACTCTTCACAATGTTTGAATCCAAATACACTTGATTAAAGAAATTCATCAAACTTCCAGCCATATCCCTTCTCCAATTAACGAACACGGCGAGCTTTCTCTTCCTGCCCCAGTCCAAGTGATTTCTGAGCATTTGCAATACCTTCAGGGTCTGGTATGGGATCAAATGTGTTAGTGAACAAAATATTG

Coding sequence (CDS)

ATGGAAGTGAAGGTGAGGCAGAGAAATAGAGCACACCGTTTTTCTCTTCTTCCACACCCAACTCTTCCTTCTCTAACTCTTAGTCTCAGAAATTGGGCCAACACCAAAAAGTCATTCAACAACCAACTCAGAGGCATTTCTCTGAGATGGAGGTTTCAACTTCTGGATGTATCCAAACATCAACTCTCCACCAAACACCACTTTGTTCATATTTTAGAAGGGAACGAGAGCTTAGCTTCAATTTCAAACAAGAATGGAGATCCCCCAAATTCCATTGTCATAGATAATAAGAAGATAGTGGACACGGATCCAGAACAAAAGGGGCAGAATATCAAGATTCAAAACCCTCGAGTAGTAAGCAAGATTAGAGATGCGTTTCAATTAGAAGAAAAGCTCCAAAATGCTTTGAATGGACTTCAAATCTATAAGAAGCTTTTTGCGCTAGCCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTGTAATATTTTGTACCAGATGCATAATTGGTGCTTCTTATGCTAGAGTTTTTGGAACATTGAAGCTTAAAGCCATTAATAAACAAGAGGGAGAACGTCACAAGTTTAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGAGAATTGGATGGTTTGGATTGTGAGGCCCCCATAGATTCTACTAGTCCTTCAGAAGATGAGCAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTAGACCAGGATTATGAAAAATTTCTATCAGAATGTGGACTAAGTAAATGGGGCTACTGGCGTGGGGGTACCCAAAGACCTGAGCAGGAATAG

Protein sequence

MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE*

Homology

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BLAST of MELO3C022199 vs. TrEMBL
Match: A0A0A0KSX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650530 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 8.5e-139
Identity = 250/279 (89.61%), Postives = 261/279 (93.55%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLL-DVSK 60
           MEVKV QRNRAHRFSLLPH T PSL LSL NWANTKKSFNNQLRGI+LRWRFQLL D+SK
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLSNWANTKKSFNNQLRGIALRWRFQLLADISK 60

Query: 61  HQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVV 120
           HQLSTKHHFVHILEGNESL S SN+NGDPP+SIV+ NKKI+DTD EQK QNIKIQNPR V
Sbjct: 61  HQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNPREV 120

Query: 121 SKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGAS 180
            KIR+AFQLEEKLQ+ALNGL+IYKKLFALASS  PPARTTSFIVLVPLVIFC RCIIGAS
Sbjct: 121 RKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCIIGAS 180

Query: 181 YARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV 240
           YAR FGTLKLKAI+KQEGER KFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV
Sbjct: 181 YARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV 240

Query: 241 EDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           E+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 EELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

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BLAST of MELO3C022199 vs. TrEMBL
Match: F6I444_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g02170 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.2e-45
Identity = 116/270 (42.96%), Postives = 164/270 (60.74%), Query Frame = 1


Query: 18  PHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNES 77
           P  T  S    L +W + ++SF    R ++ +WRFQ+ ++SK Q STKH+ VH+++  E+
Sbjct: 9   PILTFSSQRFCLDSWISKQRSFKKHFRMLTEKWRFQIQEISKGQHSTKHNSVHMVKEGET 68

Query: 78  LASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRV---------VSKIRDAFQL 137
           L+SIS + G    SI   NK I D D    GQ++ I +  V          SK+  +F  
Sbjct: 69  LSSISKQYGVSIYSIAAANKNIEDIDLVFCGQHLNIPSSAVGETQKFQTEKSKL-SSFDT 128

Query: 138 EEKLQNALN--GLQIYKKLFALASS--RLPPARTTS-FIVLVPLVIFCTRCIIGASYARV 197
            ++ Q++L   G ++ +KL  +A S   L  A+ T  F+VLVPL+ FC RCIIGA   RV
Sbjct: 129 LKRHQHSLEVLGGRLNQKLCTVALSFHSLSHAKATGYFLVLVPLIAFCIRCIIGAFQNRV 188

Query: 198 FGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSE-DEQISVEDL 257
            G L+ +A+N+ E + H  +S  W+SAL DIRE D LD     DS +PSE   Q S E++
Sbjct: 189 VGDLRHQAVNESEVDYHGSKSVRWKSALDDIREPDTLDTGLQPDSINPSEVQTQGSAEEV 248

Query: 258 SHAYKKLDQDYEKFLSECGLSKWGYWRGGT 273
           SHAY KL+ DY++FLSECG+SKWGYWRGG+
Sbjct: 249 SHAYGKLEHDYQQFLSECGISKWGYWRGGS 277

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BLAST of MELO3C022199 vs. TrEMBL
Match: B9MWH0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s10230g PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.3e-40
Identity = 114/292 (39.04%), Postives = 160/292 (54.79%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLL-------PHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQ 60
           MEVK+  R    RFS L       P+P     + SL+ W N+KK F      ++ RWRF 
Sbjct: 1   MEVKLSHR----RFSDLSLPRFHFPNPKTTFPSPSLKWWVNSKKHFTV----LAERWRFH 60

Query: 61  LLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKI 120
           + D+SK Q ST  + +H+++  E+L SIS + G    S+   NK I+D D   +GQ + I
Sbjct: 61  IQDISKGQSSTNPYLLHVVKEGETLTSISKQYGVSIYSVAAANKNILDVDLVFEGQLLNI 120

Query: 121 --------QNPRVVSKIRDAFQLEEKLQN---ALNGLQIYKKLFALASSRLPPARTTS-F 180
                   Q  ++      +F   E+LQN    ++G+   K    + + RLP A+ T  F
Sbjct: 121 PAAAPAGTQVYQIKKCESPSFDQLERLQNFMKIMDGVLNQKPFITVTTLRLPHAKATGYF 180

Query: 181 IVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLD 240
           +VLVP + FC RCIIGA + R    L  +A N+         S  W+ AL DIRE D LD
Sbjct: 181 LVLVPALAFCIRCIIGAFHTRARRNLGCQASNESRRHHDVPESKRWKHALSDIREPDNLD 240

Query: 241 CEAPIDSTSPSED-EQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGT 273
            E  ++ST  S D +Q S E++SHAY KL+ +Y+KFLSECG+S  GYWRGG+
Sbjct: 241 GEPILNSTGTSADQDQNSFEEVSHAYDKLEHEYQKFLSECGISNSGYWRGGS 284

[Close]

BLAST of MELO3C022199 vs. TrEMBL
Match: A0A059BU71_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02959 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.2e-37
Identity = 106/269 (39.41%), Postives = 150/269 (55.76%), Query Frame = 1


Query: 15  SLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEG 74
           S L  P+  +   SL +WA+ + SF    RG++  W F +  + K Q  T+   VH++  
Sbjct: 24  SSLRTPSSHTPRFSLNSWASYQLSFRKHFRGLAGTWSFHVSKILKSQEFTEECSVHVVRE 83

Query: 75  NESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS------KIRDAFQL 134
            E+L+SIS + G P + IV  NK IVD +   +GQ +KI   +  +      K+   F +
Sbjct: 84  GETLSSISKRYGIPIHPIVTLNKSIVDHELVYEGQVLKIPLSKRYAEKTEKKKLLKKFDI 143

Query: 135 EEKLQNA---LNGLQIYKKLFALASSRLPPARTTS-FIVLVPLVIFCTRCIIGASYARVF 194
            +K +NA   L+     K    L S +LP A+TT  F+VLVPL+ FC RCI      RV 
Sbjct: 144 PQKHRNASKMLDAFSQQKSFTVLISHQLPYAKTTGYFLVLVPLIAFCIRCITSVLCTRVA 203

Query: 195 GTLKLKAINKQEGERHKF-RSGHWRSALRDIRELDGLDCEAPIDSTSPSEDE-QISVEDL 254
           G L+ +  N +  + H+  +S  W+SAL D +ELD  D E+  D   PSED+ Q S  D 
Sbjct: 204 GYLR-REDNIEPKQHHQVPKSKRWKSALLDAKELDVSDPESKSDIGCPSEDQAQSSSGDT 263

Query: 255 SHAYKKLDQDYEKFLSECGLSKWGYWRGG 272
             AY KL++DY+KFLSECG+S  GYWRGG
Sbjct: 264 FQAYGKLEEDYQKFLSECGISNSGYWRGG 291

[Close]

BLAST of MELO3C022199 vs. TrEMBL
Match: A0A061FJC8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_036188 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37
Identity = 109/288 (37.85%), Postives = 160/288 (55.56%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSL---------TLSLRNWANTKKSFNNQLRGISLRWR 60
           MEVK+  R     FSL P   LP+          T SLR+WA T++   ++ +G+  +WR
Sbjct: 1   MEVKLSHRQH---FSL-PKSLLPNFKETSFPPPHTFSLRSWAATER---HRFQGLIKKWR 60

Query: 61  FQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNI 120
            Q         S  +   H+++  E+L+SIS K G    SI   NK IVD     KGQ +
Sbjct: 61  LQ-------NNSKDYICAHLVKEGETLSSISKKYGVSVYSIAAANKDIVDIHLVFKGQLL 120

Query: 121 KIQNPRVVSKIRDAFQLEE-KLQNALNGLQI--YKKLFALASSR--LPPARTTS-FIVLV 180
            I      S +++    ++ +L +++   +   +K ++++ +S      A+ T  F+VLV
Sbjct: 121 NIP----ASSLKETLLAKKSRLWHSIRAFRTPSHKIIYSMVTSHGLSNQAKATGYFLVLV 180

Query: 181 PLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAP 240
           PL+ FC RCII     RV   ++ +A++K +G     +S  W+SAL D  E D  D E+ 
Sbjct: 181 PLIAFCIRCIISTFRIRVARDMRHQAVDKSKGHHPGAKSMRWKSALSDTEESDAFDSESG 240

Query: 241 IDSTSPSEDE-QISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGT 273
           +DS SPSEDE  IS ++ SHAY +L  DYEKFLSECG+SKWGYWRGG+
Sbjct: 241 LDSNSPSEDEAYISYDEASHAYSRLQHDYEKFLSECGMSKWGYWRGGS 270

[Close]

BLAST of MELO3C022199 vs. NCBI nr
Match: gi|659119394|ref|XP_008459633.1| (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])

HSP 1 Score: 563.9 bits (1452), Expect = 1.5e-157
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120

Query: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180
           KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY
Sbjct: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180

Query: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVE 240
           ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVE
Sbjct: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVE 240

Query: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of MELO3C022199 vs. NCBI nr
Match: gi|659119392|ref|XP_008459632.1| (PREDICTED: uncharacterized protein LOC103498697 isoform X1 [Cucumis melo])

HSP 1 Score: 556.6 bits (1433), Expect = 2.5e-155
Identity = 278/286 (97.20%), Postives = 278/286 (97.20%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120

Query: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPP--------ARTTSFIVLVPLVIFCT 180
           KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPP        ARTTSFIVLVPLVIFCT
Sbjct: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPVNFFFSPEARTTSFIVLVPLVIFCT 180

Query: 181 RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS 240
           RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS
Sbjct: 181 RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS 240

Query: 241 EDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           EDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 EDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 286

[Close]

BLAST of MELO3C022199 vs. NCBI nr
Match: gi|778707993|ref|XP_011656102.1| (PREDICTED: uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus])

HSP 1 Score: 501.1 bits (1289), Expect = 1.2e-138
Identity = 250/279 (89.61%), Postives = 261/279 (93.55%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLL-DVSK 60
           MEVKV QRNRAHRFSLLPH T PSL LSL NWANTKKSFNNQLRGI+LRWRFQLL D+SK
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLSNWANTKKSFNNQLRGIALRWRFQLLADISK 60

Query: 61  HQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVV 120
           HQLSTKHHFVHILEGNESL S SN+NGDPP+SIV+ NKKI+DTD EQK QNIKIQNPR V
Sbjct: 61  HQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNPREV 120

Query: 121 SKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGAS 180
            KIR+AFQLEEKLQ+ALNGL+IYKKLFALASS  PPARTTSFIVLVPLVIFC RCIIGAS
Sbjct: 121 RKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCIIGAS 180

Query: 181 YARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV 240
           YAR FGTLKLKAI+KQEGER KFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV
Sbjct: 181 YARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV 240

Query: 241 EDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           E+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 EELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

[Close]

BLAST of MELO3C022199 vs. NCBI nr
Match: gi|778707989|ref|XP_011656101.1| (PREDICTED: uncharacterized protein LOC101208955 isoform X1 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 5.2e-137
Identity = 250/282 (88.65%), Postives = 261/282 (92.55%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLL-DVSK 60
           MEVKV QRNRAHRFSLLPH T PSL LSL NWANTKKSFNNQLRGI+LRWRFQLL D+SK
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLSNWANTKKSFNNQLRGIALRWRFQLLADISK 60

Query: 61  HQLSTKHHFVHILEG---NESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120
           HQLSTKHHFVHILEG   NESL S SN+NGDPP+SIV+ NKKI+DTD EQK QNIKIQNP
Sbjct: 61  HQLSTKHHFVHILEGYGRNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNP 120

Query: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180
           R V KIR+AFQLEEKLQ+ALNGL+IYKKLFALASS  PPARTTSFIVLVPLVIFC RCII
Sbjct: 121 REVRKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCII 180

Query: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240
           GASYAR FGTLKLKAI+KQEGER KFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ
Sbjct: 181 GASYARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240

Query: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           ISVE+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 282

[Close]

BLAST of MELO3C022199 vs. NCBI nr
Match: gi|778707996|ref|XP_011656104.1| (PREDICTED: uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 8.2e-135
Identity = 248/282 (87.94%), Postives = 260/282 (92.20%), Query Frame = 1


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLL-DVSK 60
           MEVKV QRNRAHRFSLLPH T PSL LSL NWANTKKSFNNQLRGI+LRWRFQLL D+SK
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLSNWANTKKSFNNQLRGIALRWRFQLLADISK 60

Query: 61  HQLSTKHHFVHILEG---NESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNP 120
           HQLSTKHHFVHILEG   NESL S SN+NGDPP+SIV+ NKKI+DTD EQK QNIKIQNP
Sbjct: 61  HQLSTKHHFVHILEGYGRNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNP 120

Query: 121 RVVSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180
           R   +IR+AFQLEEKLQ+ALNGL+IYKKLFALASS  PPARTTSFIVLVPLVIFC RCII
Sbjct: 121 R---EIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCII 180

Query: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240
           GASYAR FGTLKLKAI+KQEGER KFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ
Sbjct: 181 GASYARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240

Query: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           ISVE+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

The following BLAST results are available for this feature:

BLAST of MELO3C022199 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSX5_CUCSA	8.5e-139	89.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650530 PE=4 SV=1	[more]
F6I444_VITVI	4.2e-45	42.96	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g02170 PE=4 SV=...	[more]
B9MWH0_POPTR	5.3e-40	39.04	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s10230g PE=4 SV=1	[more]
A0A059BU71_EUCGR	3.2e-37	39.41	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02959 PE=4 SV=1	[more]
A0A061FJC8_THECC	4.2e-37	37.85	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_036188 PE=4 SV=1	[more]

BLAST of MELO3C022199 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119394\|ref\|XP_008459633.1\|	1.5e-157	100.00	PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo]	[more]
gi\|659119392\|ref\|XP_008459632.1\|	2.5e-155	97.20	PREDICTED: uncharacterized protein LOC103498697 isoform X1 [Cucumis melo]	[more]
gi\|778707993\|ref\|XP_011656102.1\|	1.2e-138	89.61	PREDICTED: uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus]	[more]
gi\|778707989\|ref\|XP_011656101.1\|	5.2e-137	88.65	PREDICTED: uncharacterized protein LOC101208955 isoform X1 [Cucumis sativus]	[more]
gi\|778707996\|ref\|XP_011656104.1\|	8.2e-135	87.94	PREDICTED: uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022199T2	MELO3C022199T2	mRNA
MELO3C022199T1	MELO3C022199T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 205..225 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C022199	Csa5G650530	Cucumber (Chinese Long) v2	cumeB358
MELO3C022199	Cla012497	Watermelon (97103) v1	mewmB009
MELO3C022199	ClCG08G000630	Watermelon (Charleston Gray)	mewcgB037
MELO3C022199	Cla97C08G144970	Watermelon (97103) v2	mewmbB036
MELO3C022199	Bhi06G000012	Wax gourd	mewgoB033
MELO3C022199	CSPI05G31170	Wild cucumber (PI 183967)	cpimeB349
MELO3C022199	CmaCh01G008420	Cucurbita maxima (Rimu)	cmameB383
MELO3C022199	Lsi08G000500	Bottle gourd (USVL1VR-Ls)	lsimeB461
MELO3C022199	Cp4.1LG02g10700	Cucurbita pepo (Zucchini)	cpemeB486
MELO3C022199	CsGy5G030500	Cucumber (Gy14) v2	cgybmeB299
MELO3C022199	CsaV3_5G040230	Cucumber (Chinese Long) v3	cucmeB358

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022199	Cucumber (Gy14) v1	cgymeB401
MELO3C022199	Cucurbita maxima (Rimu)	cmameB010
MELO3C022199	Cucurbita moschata (Rifu)	cmomeB000
MELO3C022199	Cucurbita moschata (Rifu)	cmomeB375
MELO3C022199	Cucumber (Chinese Long) v2	cumeB368
MELO3C022199	Cucurbita pepo (Zucchini)	cpemeB708
MELO3C022199	Silver-seed gourd	carmeB0361