MELO3C022078.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C022078.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionStress-induced protein KIN2
Locationchr09 : 1328035 .. 1328450 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAAAAACTTGATCATCCAAAACTCTCACTATTTGATTTGTGATACTCTCTCTCGATCAAGAAGTATATATAAAAGACATGGCAGATAGTTCCCAAAAGATGAGCTACCAAGCTGGAGAGGCCAAAGGTCAGGCTGAAGAGAAGGCGAGCAATCTAATGGATAAGGCAAGCAATGCAGCGCAATCGGCTAAAGAGACGATACAAGAGGCAGGCCAACAGATGATGGCAAAGGCTCAAGGAGCGGCCGATGCTATCAAGGATGCAACTGGCATGAACAAATAAAGAATTAAGTGTGCATGTTTGGATTGACTTTCTTTCTAGCTATTAGAACCGTCAATCCAAACGTACCTTAACATTATTTCATTTCATTTTATTATATGTGCGTTGCCTATGCACAAGTTTTATTTAACGTTTT

mRNA sequence

ATCAAAAACTTGATCATCCAAAACTCTCACTATTTGATTTGTGATACTCTCTCTCGATCAAGAAGTATATATAAAAGACATGGCAGATAGTTCCCAAAAGATGAGCTACCAAGCTGGAGAGGCCAAAGGTCAGGCTGAAGAGAAGGCGAGCAATCTAATGGATAAGGCAAGCAATGCAGCGCAATCGGCTAAAGAGACGATACAAGAGGCAGGCCAACAGATGATGGCAAAGGCTCAAGGAGCGGCCGATGCTATCAAGGATGCAACTGGCATGAACAAATAAAGAATTAAGTGTGCATGTTTGGATTGACTTTCTTTCTAGCTATTAGAACCGTCAATCCAAACGTACCTTAACATTATTTCATTTCATTTTATTATATGTGCGTTGCCTATGCACAAGTTTTATTTAACGTTTT

Coding sequence (CDS)

ATGGCAGATAGTTCCCAAAAGATGAGCTACCAAGCTGGAGAGGCCAAAGGTCAGGCTGAAGAGAAGGCGAGCAATCTAATGGATAAGGCAAGCAATGCAGCGCAATCGGCTAAAGAGACGATACAAGAGGCAGGCCAACAGATGATGGCAAAGGCTCAAGGAGCGGCCGATGCTATCAAGGATGCAACTGGCATGAACAAATAA

Protein sequence

MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIKDATGMNK
Homology
[Close]
BLAST of MELO3C022078.2 vs. NCBI nr
Match: XP_008459448.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 5.4e-04
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MADSSQKMSYQAGEAKGQAEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIK 60
          MADSSQKMSYQAGEAKGQAEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]
BLAST of MELO3C022078.2 vs. TrEMBL
Match: tr|A0A1S3CAA8|A0A1S3CAA8_CUCME (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498579 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.6e-04
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MADSSQKMSYQAGEAKGQAEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIK 60
          MADSSQKMSYQAGEAKGQAEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAIK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

The following BLAST results are available for this feature:
BLAST of MELO3C022078.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008459448.15.4e-04100.00PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
BLAST of MELO3C022078.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C022078.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C022078.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CAA8|A0A1S3CAA8_CUCME3.6e-04100.00stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498579 PE=4 SV... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006970 response to osmotic stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022078.2.1MELO3C022078.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..47
NoneNo IPR availablePANTHERPTHR34191FAMILY NOT NAMEDcoord: 1..67
NoneNo IPR availablePANTHERPTHR34191:SF5ABA-INDUCIBLE PROTEIN-LIKE-RELATEDcoord: 1..67

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C022078.2CmoCh15G002150Cucurbita moschata (Rifu)cmomedB280
MELO3C022078.2Bhi06G000224Wax gourdmedwgoB020
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022078.2Cucumber (Gy14) v2cgybmedB297
MELO3C022078.2Cucumber (Gy14) v2cgybmedB299
MELO3C022078.2Cucumber (Gy14) v2cgybmedB305
MELO3C022078.2Cucumber (Gy14) v1cgymedB399
MELO3C022078.2Cucumber (Gy14) v1cgymedB400
MELO3C022078.2Cucurbita maxima (Rimu)cmamedB294
MELO3C022078.2Cucurbita maxima (Rimu)cmamedB285
MELO3C022078.2Cucurbita maxima (Rimu)cmamedB713
MELO3C022078.2Cucurbita maxima (Rimu)cmamedB720
MELO3C022078.2Cucurbita moschata (Rifu)cmomedB271
MELO3C022078.2Cucurbita moschata (Rifu)cmomedB704
MELO3C022078.2Cucurbita moschata (Rifu)cmomedB713
MELO3C022078.2Cucurbita pepo (Zucchini)cpemedB177
MELO3C022078.2Cucurbita pepo (Zucchini)cpemedB182
MELO3C022078.2Cucurbita pepo (Zucchini)cpemedB408
MELO3C022078.2Cucurbita pepo (Zucchini)cpemedB418
MELO3C022078.2Wild cucumber (PI 183967)cpimedB334
MELO3C022078.2Wild cucumber (PI 183967)cpimedB339
MELO3C022078.2Wild cucumber (PI 183967)cpimedB344
MELO3C022078.2Cucumber (Chinese Long) v2cumedB333
MELO3C022078.2Cucumber (Chinese Long) v2cumedB337
MELO3C022078.2Cucumber (Chinese Long) v2cumedB342
MELO3C022078.2Melon (DHL92) v3.6.1medmedB001
MELO3C022078.2Bottle gourd (USVL1VR-Ls)lsimedB242
MELO3C022078.2Bottle gourd (USVL1VR-Ls)lsimedB243
MELO3C022078.2Watermelon (Charleston Gray)medwcgB007
MELO3C022078.2Watermelon (Charleston Gray)medwcgB008
MELO3C022078.2Watermelon (97103) v1medwmB037
MELO3C022078.2Watermelon (97103) v1medwmB038
MELO3C022078.2Silver-seed gourdcarmedB0019
MELO3C022078.2Silver-seed gourdcarmedB0018
MELO3C022078.2Silver-seed gourdcarmedB0270
MELO3C022078.2Silver-seed gourdcarmedB0273
MELO3C022078.2Cucumber (Chinese Long) v3cucmedB346
MELO3C022078.2Cucumber (Chinese Long) v3cucmedB350
MELO3C022078.2Watermelon (97103) v2medwmbB013
MELO3C022078.2Watermelon (97103) v2medwmbB014
MELO3C022078.2Wax gourdmedwgoB023