MELO3C021358.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C021358.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptioncarotenoid cleavage dioxygenase 7, chloroplastic isoform X1
Locationchr11 : 30073385 .. 30074251 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTACAATTAAAGGAAACAGATATGAACCATGTTTTCCACTTATTCTGCATAAAATATTTGCAAATAGAAAACAAACCACATGACCTTTTCCTCTAATAGAAAGAGTAGAAAAAAGTACTAATTTTAGCATTCAATTTTCTAAATTTAACAAATAATCATAGTCCTATAAAACTCCACTTTTTTCTTCTCCTCAAACAATCATCCTCTCGCCAAAAATAAAATTTTAAAAAAGTTGTAATAAAGAAAAAGAAACACTGCAAACTTAAAAATAAAATGGCGAACAAGAAGATGATGGCAGTGTTTCTCTTGTGTATTCTGGTGGTGGCTGCATTTGAAATCTCCATTGTTGCCGCGGGCGAGGAGGGTAACGTTATCCCGAGGAAAAAGTCACTTTTTTCCAAAATTTACGGTAAGTATTGTATCAATTTTTACTCTAAATTTTTTTGAAATGTAATGTTATTTACTACGATTCTTATTATTTTGTGTCAAAATAAGGTATAAAATTTAACTCATATAAATCAGTTTTTCATTTTAAAAGATGAAGTACTTGGTGTTGATTCTTTTAAAAAAAATTGTTAGATTGTAACAAAGAACTTTTGCATCTGTCTTGATTGATTTATTTATTTTGATTGTATGTGTGTGTTTGTGTTTTTTTTTCCAGATAAATTGCACATCGATATGCCCAATAATTGATAATTGAGGATAAACGAAGAAAGAAGAGTTCTCAAGACTAATGATGGGGTTAATGTAAATGGTGGTGTATAATTTATTTTGAATCATTATTTTTTTCCTTTATGAGAGGAATTTCTGGGCCTCTTTGTCCTCTTTCATTTTTATTTAATAGTAATCTCTTTGTTTCATGGATA

mRNA sequence

GTTACAATTAAAGGAAACAGATATGAACCATGTTTTCCACTTATTCTGCATAAAATATTTGCAAATAGAAAACAAACCACATGACCTTTTCCTCTAATAGAAAGAGTAGAAAAAAGTACTAATTTTAGCATTCAATTTTCTAAATTTAACAAATAATCATAGTCCTATAAAACTCCACTTTTTTCTTCTCCTCAAACAATCATCCTCTCGCCAAAAATAAAATTTTAAAAAAGTTGTAATAAAGAAAAAGAAACACTGCAAACTTAAAAATAAAATGGCGAACAAGAAGATGATGGCAGTGTTTCTCTTGTGTATTCTGGTGGTGGCTGCATTTGAAATCTCCATTGTTGCCGCGGGCGAGGAGGGTAACGTTATCCCGAGGAAAAAGTCACTTTTTTCCAAAATTTACGATAAATTGCACATCGATATGCCCAATAATTGATAATTGAGGATAAACGAAGAAAGAAGAGTTCTCAAGACTAATGATGGGGTTAATGTAAATGGTGGTGTATAATTTATTTTGAATCATTATTTTTTTCCTTTATGAGAGGAATTTCTGGGCCTCTTTGTCCTCTTTCATTTTTATTTAATAGTAATCTCTTTGTTTCATGGATA

Coding sequence (CDS)

ATGGCGAACAAGAAGATGATGGCAGTGTTTCTCTTGTGTATTCTGGTGGTGGCTGCATTTGAAATCTCCATTGTTGCCGCGGGCGAGGAGGGTAACGTTATCCCGAGGAAAAAGTCACTTTTTTCCAAAATTTACGATAAATTGCACATCGATATGCCCAATAATTGA

Protein sequence

MANKKMMAVFLLCILVVAAFEISIVAAGEEGNVIPRKKSLFSKIYDKLHIDMPNN
Homology
[Close]
BLAST of MELO3C021358.2 vs. NCBI nr
Match: KGN47207.1 (hypothetical protein Csa_6G200320 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 5.2e-13
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 4  KKMMAVFLLCILVVAAFEISIVAAGEEGNVIPRKKSLFSKIYDKLHIDMPNN 56
          KKMMAVFLLCILV+AA EIS VAAGEE N IPRKKSLFS+I+DKL +DMP N
Sbjct: 3  KKMMAVFLLCILVLAALEISAVAAGEEANNIPRKKSLFSRIFDKLGVDMPKN 54

[Close]
BLAST of MELO3C021358.2 vs. TrEMBL
Match: tr|A0A0A0KFK4|A0A0A0KFK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-13
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 4  KKMMAVFLLCILVVAAFEISIVAAGEEGNVIPRKKSLFSKIYDKLHIDMPNN 56
          KKMMAVFLLCILV+AA EIS VAAGEE N IPRKKSLFS+I+DKL +DMP N
Sbjct: 3  KKMMAVFLLCILVLAALEISAVAAGEEANNIPRKKSLFSRIFDKLGVDMPKN 54

The following BLAST results are available for this feature:
BLAST of MELO3C021358.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47207.15.2e-1380.77hypothetical protein Csa_6G200320 [Cucumis sativus][more]
BLAST of MELO3C021358.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C021358.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C021358.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFK4|A0A0A0KFK4_CUCSA3.4e-1380.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021358.2.1MELO3C021358.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021358.2Csa6G200320Cucumber (Chinese Long) v2cumedB428
MELO3C021358.2CSPI06G14950Wild cucumber (PI 183967)cpimedB437
MELO3C021358.2Cla97C06G114870Watermelon (97103) v2medwmbB118
MELO3C021358.2CsaV3_6G017420Cucumber (Chinese Long) v3cucmedB441
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021358.2Cucumber (Gy14) v2cgybmedB148
MELO3C021358.2Cucumber (Gy14) v1cgymedB425
MELO3C021358.2Cucurbita maxima (Rimu)cmamedB242
MELO3C021358.2Cucurbita maxima (Rimu)cmamedB365
MELO3C021358.2Cucurbita maxima (Rimu)cmamedB371
MELO3C021358.2Cucurbita maxima (Rimu)cmamedB846
MELO3C021358.2Cucurbita maxima (Rimu)cmamedB914
MELO3C021358.2Cucurbita moschata (Rifu)cmomedB225
MELO3C021358.2Cucurbita moschata (Rifu)cmomedB351
MELO3C021358.2Cucurbita moschata (Rifu)cmomedB357
MELO3C021358.2Cucurbita moschata (Rifu)cmomedB840
MELO3C021358.2Cucurbita moschata (Rifu)cmomedB903
MELO3C021358.2Cucurbita pepo (Zucchini)cpemedB138
MELO3C021358.2Cucurbita pepo (Zucchini)cpemedB143
MELO3C021358.2Cucurbita pepo (Zucchini)cpemedB331
MELO3C021358.2Cucurbita pepo (Zucchini)cpemedB337
MELO3C021358.2Cucurbita pepo (Zucchini)cpemedB659
MELO3C021358.2Cucurbita pepo (Zucchini)cpemedB933
MELO3C021358.2Wild cucumber (PI 183967)cpimedB165
MELO3C021358.2Cucumber (Chinese Long) v2cumedB165
MELO3C021358.2Melon (DHL92) v3.6.1medmedB049
MELO3C021358.2Bottle gourd (USVL1VR-Ls)lsimedB019
MELO3C021358.2Bottle gourd (USVL1VR-Ls)lsimedB180
MELO3C021358.2Bottle gourd (USVL1VR-Ls)lsimedB359
MELO3C021358.2Watermelon (Charleston Gray)medwcgB075
MELO3C021358.2Watermelon (Charleston Gray)medwcgB115
MELO3C021358.2Watermelon (Charleston Gray)medwcgB119
MELO3C021358.2Watermelon (97103) v1medwmB085
MELO3C021358.2Watermelon (97103) v1medwmB094
MELO3C021358.2Watermelon (97103) v1medwmB139
MELO3C021358.2Silver-seed gourdcarmedB0068
MELO3C021358.2Silver-seed gourdcarmedB0336
MELO3C021358.2Silver-seed gourdcarmedB0615
MELO3C021358.2Silver-seed gourdcarmedB0839
MELO3C021358.2Cucumber (Chinese Long) v3cucmedB167
MELO3C021358.2Watermelon (97103) v2medwmbB114
MELO3C021358.2Watermelon (97103) v2medwmbB122
MELO3C021358.2Wax gourdmedwgoB101
MELO3C021358.2Wax gourdmedwgoB106