MELO3C021337 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021337
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAbhydrolase domain-containing protein 1
Locationchr11 : 27344010 .. 27344471 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTTTGCTTGTAAGCGTGGGGGGTGGATATTTATCAAAGTTAATCTTTGAACATGGTGGAAAAGGTTCATCCTCTACTAATTCTTTATCCTCTTCTTCTGATAACGTTGATAATCAAGCTACACCAATCTCCACTGGTCAAGGCCCTGCTACAGCTACCATTGACCAGGCTACACTAATCTCCACTGGTGAATACGCTGCTACAGATACCATTGACCCGGCTACACCAATCTCCACCGTTCAAGACGCTGCTGCAGGCACCTTTGACCTGGCCTCGTTTTACCATAACGGTTCACCAGTTTCTGACACCGATATCTTCGTAGCCCCTGACTTGGCGTCGTCGTTTTACGAAGATGATTCACCATTGACCAATCTTCCATGGAATGCACCCCTGGAAGAAGACAATACCGACCTCCTTCATTCTATGGTTGATGGTGTGTTATCCTCTTTTTGTTGA

mRNA sequence

ATGGCGGGTTTGCTTGTAAGCGTGGGGGGTGGATATTTATCAAAGTTAATCTTTGAACATGGTGGAAAAGGTTCATCCTCTACTAATTCTTTATCCTCTTCTTCTGATAACGTTGATAATCAAGCTACACCAATCTCCACTGGTCAAGGCCCTGCTACAGCTACCATTGACCAGGCTACACTAATCTCCACTGGTGAATACGCTGCTACAGATACCATTGACCCGGCTACACCAATCTCCACCGTTCAAGACGCTGCTGCAGGCACCTTTGACCTGGCCTCGTTTTACCATAACGGTTCACCAGTTTCTGACACCGATATCTTCGTAGCCCCTGACTTGGCGTCGTCGTTTTACGAAGATGATTCACCATTGACCAATCTTCCATGGAATGCACCCCTGGAAGAAGACAATACCGACCTCCTTCATTCTATGGTTGATGGTGTGTTATCCTCTTTTTGTTGA

Coding sequence (CDS)

ATGGCGGGTTTGCTTGTAAGCGTGGGGGGTGGATATTTATCAAAGTTAATCTTTGAACATGGTGGAAAAGGTTCATCCTCTACTAATTCTTTATCCTCTTCTTCTGATAACGTTGATAATCAAGCTACACCAATCTCCACTGGTCAAGGCCCTGCTACAGCTACCATTGACCAGGCTACACTAATCTCCACTGGTGAATACGCTGCTACAGATACCATTGACCCGGCTACACCAATCTCCACCGTTCAAGACGCTGCTGCAGGCACCTTTGACCTGGCCTCGTTTTACCATAACGGTTCACCAGTTTCTGACACCGATATCTTCGTAGCCCCTGACTTGGCGTCGTCGTTTTACGAAGATGATTCACCATTGACCAATCTTCCATGGAATGCACCCCTGGAAGAAGACAATACCGACCTCCTTCATTCTATGGTTGATGGTGTGTTATCCTCTTTTTGTTGA

Protein sequence

MAGLLVSVGGGYLSKLIFEHGGKGSSSTNSLSSSSDNVDNQATPISTGQGPATATIDQATLISTGEYAATDTIDPATPISTVQDAAAGTFDLASFYHNGSPVSDTDIFVAPDLASSFYEDDSPLTNLPWNAPLEEDNTDLLHSMVDGVLSSFC*
Homology
[Close]
BLAST of MELO3C021337 vs. TrEMBL
Match: A0A0A0KBV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194690 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.8e-17
Identity = 72/176 (40.91%), Postives = 91/176 (51.70%), Query Frame = 1 

Query: 1   MAGLLVSVGGGYLSKLIFEHGGKGSSSTNSLSSSSDNVDNQATPISTGQGPATATIDQAT 60
           M GL VSVGGGY+S++IFEHG KGSSST+S  SSS N                      T
Sbjct: 1   MTGLGVSVGGGYISRIIFEHGQKGSSSTDSFPSSSSN---------------------GT 60

Query: 61  LISTGEYAATDTIDPATPISTVQDAAAGTFDLASFYHNG----SPVSDTDIFVAPDLA-S 120
            +S   +    T     PIST QDAA  +   +SFY++G    +  SDTD  VA +LA S
Sbjct: 61  SVSPNSFYDNQT----PPISTYQDAAPAS--TSSFYYDGGSRLTTFSDTDTLVASNLATS 120

Query: 121 SFYEDDSPLTNLPWN----------APLEE---------DNTDLLHSMVDGVLSSF 153
           SFY+D  PLT  P N          AP+++         D+T LL S+VD + SSF
Sbjct: 121 SFYKDGLPLTGFPHNATSASNDSSDAPIDDVYRTTSYDGDSTTLLDSVVDALFSSF 149

[Close]
BLAST of MELO3C021337 vs. NCBI nr
Match: gi|659117166|ref|XP_008458456.1| (PREDICTED: uncharacterized protein LOC103497858 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 1.9e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MAGLLVSVGGGYLSKLIFEHGGKGSSSTNSLSSSSDNVDNQATPISTGQGPATATIDQAT 60
           MAGLLVSVGGGYLSKLIFEHGGKGSSSTNSLSSSSDNVDNQATPISTGQGPATATIDQAT
Sbjct: 183 MAGLLVSVGGGYLSKLIFEHGGKGSSSTNSLSSSSDNVDNQATPISTGQGPATATIDQAT 242

Query: 61  LISTGEYAATDTIDPATPISTVQDAAAGTFDLASFYHNGSPVSDTDIFVAPDLASSFYED 120
           LISTGEYAATDTIDPATPISTVQDAAAGTFDLASFYHNGSPVSDTDIFVAPDLASSFYED
Sbjct: 243 LISTGEYAATDTIDPATPISTVQDAAAGTFDLASFYHNGSPVSDTDIFVAPDLASSFYED 302

Query: 121 DSPLTNLPWNAPLEEDNTDLLHSMVDGVLSSFC 154
           DSPLTNLPWNAPLEEDNTDLLHSMVDGVLSSFC
Sbjct: 303 DSPLTNLPWNAPLEEDNTDLLHSMVDGVLSSFC 335

[Close]
BLAST of MELO3C021337 vs. NCBI nr
Match: gi|700191981|gb|KGN47185.1| (hypothetical protein Csa_6G194690 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-16
Identity = 72/176 (40.91%), Postives = 91/176 (51.70%), Query Frame = 1 

Query: 1   MAGLLVSVGGGYLSKLIFEHGGKGSSSTNSLSSSSDNVDNQATPISTGQGPATATIDQAT 60
           M GL VSVGGGY+S++IFEHG KGSSST+S  SSS N                      T
Sbjct: 1   MTGLGVSVGGGYISRIIFEHGQKGSSSTDSFPSSSSN---------------------GT 60

Query: 61  LISTGEYAATDTIDPATPISTVQDAAAGTFDLASFYHNG----SPVSDTDIFVAPDLA-S 120
            +S   +    T     PIST QDAA  +   +SFY++G    +  SDTD  VA +LA S
Sbjct: 61  SVSPNSFYDNQT----PPISTYQDAAPAS--TSSFYYDGGSRLTTFSDTDTLVASNLATS 120

Query: 121 SFYEDDSPLTNLPWN----------APLEE---------DNTDLLHSMVDGVLSSF 153
           SFY+D  PLT  P N          AP+++         D+T LL S+VD + SSF
Sbjct: 121 SFYKDGLPLTGFPHNATSASNDSSDAPIDDVYRTTSYDGDSTTLLDSVVDALFSSF 149

The following BLAST results are available for this feature:
BLAST of MELO3C021337 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBV2_CUCSA7.8e-1740.91Uncharacterized protein OS=Cucumis sativus GN=Csa_6G194690 PE=4 SV=1[more]
BLAST of MELO3C021337 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117166|ref|XP_008458456.1|1.9e-80100.00PREDICTED: uncharacterized protein LOC103497858 [Cucumis melo][more]
gi|700191981|gb|KGN47185.1|1.1e-1640.91hypothetical protein Csa_6G194690 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021337T1MELO3C021337T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021337CsaV3_6G017240Cucumber (Chinese Long) v3cucmeB450
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021337Cucumber (Gy14) v2cgybmeB149
MELO3C021337Cucumber (Gy14) v2cgybmeB386
MELO3C021337Silver-seed gourdcarmeB0067
MELO3C021337Silver-seed gourdcarmeB0609
MELO3C021337Silver-seed gourdcarmeB0700
MELO3C021337Silver-seed gourdcarmeB0827
MELO3C021337Cucumber (Chinese Long) v3cucmeB176
MELO3C021337Watermelon (97103) v2mewmbB123
MELO3C021337Watermelon (97103) v2mewmbB128
MELO3C021337Watermelon (97103) v2mewmbB132
MELO3C021337Wax gourdmewgoB101
MELO3C021337Wax gourdmewgoB105
MELO3C021337Melon (DHL92) v3.5.1memeB051
MELO3C021337Cucumber (Gy14) v1cgymeB305
MELO3C021337Cucumber (Gy14) v1cgymeB430
MELO3C021337Cucurbita maxima (Rimu)cmameB215
MELO3C021337Cucurbita maxima (Rimu)cmameB313
MELO3C021337Cucurbita maxima (Rimu)cmameB747
MELO3C021337Cucurbita maxima (Rimu)cmameB816
MELO3C021337Cucurbita moschata (Rifu)cmomeB200
MELO3C021337Cucurbita moschata (Rifu)cmomeB306
MELO3C021337Cucurbita moschata (Rifu)cmomeB738
MELO3C021337Cucurbita moschata (Rifu)cmomeB800
MELO3C021337Wild cucumber (PI 183967)cpimeB174
MELO3C021337Wild cucumber (PI 183967)cpimeB439
MELO3C021337Cucumber (Chinese Long) v2cumeB180
MELO3C021337Cucumber (Chinese Long) v2cumeB440
MELO3C021337Cucumber (Chinese Long) v2cumeB447
MELO3C021337Watermelon (Charleston Gray)mewcgB121
MELO3C021337Watermelon (Charleston Gray)mewcgB124
MELO3C021337Watermelon (97103) v1mewmB088
MELO3C021337Watermelon (97103) v1mewmB096
MELO3C021337Watermelon (97103) v1mewmB141
MELO3C021337Cucurbita pepo (Zucchini)cpemeB112
MELO3C021337Cucurbita pepo (Zucchini)cpemeB283
MELO3C021337Cucurbita pepo (Zucchini)cpemeB555
MELO3C021337Cucurbita pepo (Zucchini)cpemeB793
MELO3C021337Bottle gourd (USVL1VR-Ls)lsimeB017
MELO3C021337Bottle gourd (USVL1VR-Ls)lsimeB342