MELO3C021138 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021138
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_11
Locationchr1 : 27030272 .. 27030646 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTCAATTTCACAAGAAAATCACATTACTATTTGAAGCTAAATCAAGGCTTAACTCTCTTTTTAGGATATGTTGAAGAGAGAAGCATTGGCCATATCCATGTGCTCAAACTCAGGAGGATTAGTCGGATGGTGTCGCCCACGACGGCGGTCGAGACGTCGACGAAGTAGCACGATACGACTTGGGAATCGACGAAGAGGGTTCTATCTTGGATCTCGAGTCGTAGTCGGCCCTTTTCGGATGTTGAAGAGGTTGATTATGGAGTTGGCTCCAAATGAGAAGTTGATAGAGGCTTATTACTCACTTTTGCCGTTTTTACGTCCAACTTTGTTCCCTCTTAGTTGATAAATATGCTTAACTCTTTAATGAATGAA

mRNA sequence

AAATTCAATTTCACAAGAAAATCACATTACTATTTGAAGCTAAATCAAGGCTTAACTCTCTTTTTAGGATATGTTGAAGAGAGAAGCATTGGCCATATCCATGTGCTCAAACTCAGGAGGATTAGTCGGATGGTGTCGCCCACGACGGCGGTCGAGACGTCGACGAAGTAGCACGATACGACTTGGGAATCGACGAAGAGGGTTCTATCTTGGATCTCGAGTCGTAGTCGGCCCTTTTCGGATGTTGAAGAGGTTGATTATGGAGTTGGCTCCAAATGAGAAGTTGATAGAGGCTTATTACTCACTTTTGCCGTTTTTACGTCCAACTTTGTTCCCTCTTAGTTGATAAATATGCTTAACTCTTTAATGAATGAA

Coding sequence (CDS)

ATGTTGAAGAGAGAAGCATTGGCCATATCCATGTGCTCAAACTCAGGAGGATTAGTCGGATGGTGTCGCCCACGACGGCGGTCGAGACGTCGACGAAGTAGCACGATACGACTTGGGAATCGACGAAGAGGGTTCTATCTTGGATCTCGAGTCGTAGTCGGCCCTTTTCGGATGTTGAAGAGGTTGATTATGGAGTTGGCTCCAAATGAGAAGTTGATAGAGGCTTATTACTCACTTTTGCCGTTTTTACGTCCAACTTTGTTCCCTCTTAGTTGA

Protein sequence

MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSRVVVGPFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPLS*
Homology
[Close]
BLAST of MELO3C021138 vs. TrEMBL
Match: A0A0A0K5B5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G370760 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 8.4e-43
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSRVVVGPFRMLK 60
          MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGF LGSRVVVGPFRMLK
Sbjct: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK 60

Query: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 92
          RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS
Sbjct: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 91

[Close]
BLAST of MELO3C021138 vs. TrEMBL
Match: B9GQQ6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s25160g PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.9e-24
Identity = 62/96 (64.58%), Postives = 71/96 (73.96%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSR------VVVG 60
          MLKR A+ +SM SNS  LVGWCR RRR RRRR  TIRLGN+RRGF L SR      V+V 
Sbjct: 1  MLKRGAITVSMFSNSTVLVGWCRGRRRLRRRRVGTIRLGNKRRGFCLVSRPVIQWGVMVA 60

Query: 61 PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          P RMLK +IM++APN + IEAYY  LPFLRP +FPL
Sbjct: 61 PLRMLKNIIMDMAPNGRFIEAYYLSLPFLRPQIFPL 96

[Close]
BLAST of MELO3C021138 vs. TrEMBL
Match: M5VHF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022957mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-22
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSR------VVVG 60
          ML+R ++AI + SNS  LVGWCRPRRR RRRR STI LGN+RRGF LGSR       VV 
Sbjct: 1  MLRRGSIAICL-SNSTMLVGWCRPRRRLRRRRGSTIWLGNKRRGFGLGSRPALQWGAVVS 60

Query: 61 PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          P RMLK++ ME+ PNE+ IEAY   LPFLRP +FPL
Sbjct: 61 PIRMLKKMFMEMVPNERWIEAYNWSLPFLRPQIFPL 95

[Close]
BLAST of MELO3C021138 vs. TrEMBL
Match: A0A061DM57_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002687 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-22
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNR--RRGFYLGSR------VV 60
          MLKR ++ ISM  NS  LVGWC  RRR RRRR STIRLGN+  RRGF LGSR      V+
Sbjct: 1  MLKRGSMTISMFPNSTVLVGWCPGRRRLRRRRGSTIRLGNKAKRRGFCLGSRPVVQWGVM 60

Query: 61 VGPFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          VGP RMLK++I+E+ P  K I+AYY  LPFLRP LFPL
Sbjct: 61 VGPLRMLKKIIVEITPKGKWIQAYYMYLPFLRPQLFPL 98

[Close]
BLAST of MELO3C021138 vs. TrEMBL
Match: A0A067FCH9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042695mg PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-22
Identity = 62/99 (62.63%), Postives = 73/99 (73.74%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCR--PRRRSRRRRSSTIRLGNRRRGFYLGSR------VV 60
          MLKR +L++SM SNS  LVGWCR   RRRSRRRR  T+RLGN+RR F LGSR      V+
Sbjct: 1  MLKRSSLSVSMLSNSALLVGWCRGSARRRSRRRRVCTVRLGNKRRRFCLGSRPVVQWGVM 60

Query: 61 VGPFRMLKRLIMELAPNEKLIEAYYSLLP-FLRPTLFPL 91
          VGP RMLK++IME+ PN + IEAYY  LP FLRP + PL
Sbjct: 61 VGPLRMLKKIIMEITPNGRWIEAYYLSLPLFLRPQIIPL 99

[Close]
BLAST of MELO3C021138 vs. TAIR10
Match: AT3G07425.1 (AT3G07425.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 6.7e-07
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 1 

Query: 21 WCRPRRRSRRRRSSTIRLGNRRRGFYLGS--------RVVVG-PFRMLKRLIMEL---AP 80
          W + RR+ +R     +RLGNRRRGF +G         R+ +G P +M++ +I+ +     
Sbjct: 19 WPQQRRKGKR---VVVRLGNRRRGFLVGPPRMVMQRWRMNMGKPMKMMRSIILGILSNGG 78

Query: 81 NEKLIEAYYSLLPFLRPTLFPL 91
          N K ++AY   LP LRP LFPL
Sbjct: 79 NVKFLDAYLWSLPILRPHLFPL 97

[Close]
BLAST of MELO3C021138 vs. NCBI nr
Match: gi|700189445|gb|KGN44678.1| (hypothetical protein Csa_7G370760 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-42
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSRVVVGPFRMLK 60
          MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGF LGSRVVVGPFRMLK
Sbjct: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK 60

Query: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 92
          RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS
Sbjct: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 91

[Close]
BLAST of MELO3C021138 vs. NCBI nr
Match: gi|802546600|ref|XP_012085759.1| (PREDICTED: uncharacterized protein LOC105644870 [Jatropha curcas])

HSP 1 Score: 124.8 bits (312), Expect = 7.9e-26
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 1 

Query: 1   MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSR------VVVG 60
           M KR  ++ISM SNS  LVGWCRPRRR RR + STIRLGN+RRGF LGSR      V+V 
Sbjct: 12  MFKRGGVSISMFSNSTMLVGWCRPRRRLRRHKGSTIRLGNKRRGFCLGSRRVVQWGVMVA 71

Query: 61  PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
           PFRMLK++I+++APN +LIEAYY  LPFLRP +FPL
Sbjct: 72  PFRMLKKIILDIAPNGQLIEAYYWSLPFLRPQIFPL 107

[Close]
BLAST of MELO3C021138 vs. NCBI nr
Match: gi|224065443|ref|XP_002301820.1| (hypothetical protein POPTR_0002s25160g [Populus trichocarpa])

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-24
Identity = 62/96 (64.58%), Postives = 71/96 (73.96%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSR------VVVG 60
          MLKR A+ +SM SNS  LVGWCR RRR RRRR  TIRLGN+RRGF L SR      V+V 
Sbjct: 1  MLKRGAITVSMFSNSTVLVGWCRGRRRLRRRRVGTIRLGNKRRGFCLVSRPVIQWGVMVA 60

Query: 61 PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          P RMLK +IM++APN + IEAYY  LPFLRP +FPL
Sbjct: 61 PLRMLKNIIMDMAPNGRFIEAYYLSLPFLRPQIFPL 96

[Close]
BLAST of MELO3C021138 vs. NCBI nr
Match: gi|595791083|ref|XP_007199290.1| (hypothetical protein PRUPE_ppa022957mg [Prunus persica])

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-22
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFYLGSR------VVVG 60
          ML+R ++AI + SNS  LVGWCRPRRR RRRR STI LGN+RRGF LGSR       VV 
Sbjct: 1  MLRRGSIAICL-SNSTMLVGWCRPRRRLRRRRGSTIWLGNKRRGFGLGSRPALQWGAVVS 60

Query: 61 PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          P RMLK++ ME+ PNE+ IEAY   LPFLRP +FPL
Sbjct: 61 PIRMLKKMFMEMVPNERWIEAYNWSLPFLRPQIFPL 95

[Close]
BLAST of MELO3C021138 vs. NCBI nr
Match: gi|590713332|ref|XP_007049613.1| (Uncharacterized protein TCM_002687 [Theobroma cacao])

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-22
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 1 

Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNR--RRGFYLGSR------VV 60
          MLKR ++ ISM  NS  LVGWC  RRR RRRR STIRLGN+  RRGF LGSR      V+
Sbjct: 1  MLKRGSMTISMFPNSTVLVGWCPGRRRLRRRRGSTIRLGNKAKRRGFCLGSRPVVQWGVM 60

Query: 61 VGPFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          VGP RMLK++I+E+ P  K I+AYY  LPFLRP LFPL
Sbjct: 61 VGPLRMLKKIIVEITPKGKWIQAYYMYLPFLRPQLFPL 98

The following BLAST results are available for this feature:
BLAST of MELO3C021138 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5B5_CUCSA8.4e-4398.90Uncharacterized protein OS=Cucumis sativus GN=Csa_7G370760 PE=4 SV=1[more]
B9GQQ6_POPTR3.9e-2464.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s25160g PE=4 SV=1[more]
M5VHF5_PRUPE1.3e-2263.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022957mg PE=4 SV=1[more]
A0A061DM57_THECC1.3e-2263.27Uncharacterized protein OS=Theobroma cacao GN=TCM_002687 PE=4 SV=1[more]
A0A067FCH9_CITSI2.8e-2262.63Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042695mg PE=4 SV=1[more]
BLAST of MELO3C021138 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07425.16.7e-0739.02 unknown protein[more]
BLAST of MELO3C021138 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189445|gb|KGN44678.1|1.2e-4298.90hypothetical protein Csa_7G370760 [Cucumis sativus][more]
gi|802546600|ref|XP_012085759.1|7.9e-2665.63PREDICTED: uncharacterized protein LOC105644870 [Jatropha curcas][more]
gi|224065443|ref|XP_002301820.1|5.6e-2464.58hypothetical protein POPTR_0002s25160g [Populus trichocarpa][more]
gi|595791083|ref|XP_007199290.1|1.8e-2263.54hypothetical protein PRUPE_ppa022957mg [Prunus persica][more]
gi|590713332|ref|XP_007049613.1|1.8e-2263.27Uncharacterized protein TCM_002687 [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021138T1MELO3C021138T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021138Csa7G370760Cucumber (Chinese Long) v2cumeB523
MELO3C021138CmaCh17G013080Cucurbita maxima (Rimu)cmameB321
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021138Watermelon (97103) v2mewmbB225
MELO3C021138Wax gourdmewgoB256
MELO3C021138Cucumber (Gy14) v1cgymeB637
MELO3C021138Cucurbita maxima (Rimu)cmameB095
MELO3C021138Cucurbita maxima (Rimu)cmameB826
MELO3C021138Cucurbita moschata (Rifu)cmomeB093
MELO3C021138Cucurbita moschata (Rifu)cmomeB810
MELO3C021138Wild cucumber (PI 183967)cpimeB527
MELO3C021138Watermelon (Charleston Gray)mewcgB177
MELO3C021138Watermelon (97103) v1mewmB200
MELO3C021138Cucurbita pepo (Zucchini)cpemeB119
MELO3C021138Cucurbita pepo (Zucchini)cpemeB294
MELO3C021138Cucurbita pepo (Zucchini)cpemeB612
MELO3C021138Bottle gourd (USVL1VR-Ls)lsimeB187
MELO3C021138Cucumber (Gy14) v2cgybmeB459
MELO3C021138Silver-seed gourdcarmeB0011
MELO3C021138Silver-seed gourdcarmeB0083
MELO3C021138Cucumber (Chinese Long) v3cucmeB539