Csa7G370760 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G370760
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 13193956 .. 13194231 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGAGAGAAGCTTTGGCCATATCCATGTGCTCGAACTCAGGAGGATTAGTGGGATGGTGTCGCCCACGACGACGGTCAAGACGTCGACGAAGTAGCACAATACGGCTTGGGAATCGACGAAGAGGGTTCTGTCTTGGATCTCGAGTCGTGGTCGGCCCTTTTCGAATGTTGAAGAGGTTGATTATGGAGTTGGCTCCAAATGAGAAGTTGATAGAAGCTTATTACTCACTTTTGCCATTTTTACGTCCAACTTTGTTCCCTCTTAGTTGA

mRNA sequence

ATGTTGAAGAGAGAAGCTTTGGCCATATCCATGTGCTCGAACTCAGGAGGATTAGTGGGATGGTGTCGCCCACGACGACGGTCAAGACGTCGACGAAGTAGCACAATACGGCTTGGGAATCGACGAAGAGGGTTCTGTCTTGGATCTCGAGTCGTGGTCGGCCCTTTTCGAATGTTGAAGAGGTTGATTATGGAGTTGGCTCCAAATGAGAAGTTGATAGAAGCTTATTACTCACTTTTGCCATTTTTACGTCCAACTTTGTTCCCTCTTAGTTGA

Coding sequence (CDS)

ATGTTGAAGAGAGAAGCTTTGGCCATATCCATGTGCTCGAACTCAGGAGGATTAGTGGGATGGTGTCGCCCACGACGACGGTCAAGACGTCGACGAAGTAGCACAATACGGCTTGGGAATCGACGAAGAGGGTTCTGTCTTGGATCTCGAGTCGTGGTCGGCCCTTTTCGAATGTTGAAGAGGTTGATTATGGAGTTGGCTCCAAATGAGAAGTTGATAGAAGCTTATTACTCACTTTTGCCATTTTTACGTCCAACTTTGTTCCCTCTTAGTTGA

Protein sequence

MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPLS*

Homology

[Close]

BLAST of Csa7G370760 vs. TrEMBL
Match: A0A0A0K5B5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G370760 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.5e-44
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK 60
          MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK
Sbjct: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK 60

Query: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 92
          RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS
Sbjct: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 91

[Close]

BLAST of Csa7G370760 vs. TrEMBL
Match: B9GQQ6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s25160g PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSR------VVVG 60
          MLKR A+ +SM SNS  LVGWCR RRR RRRR  TIRLGN+RRGFCL SR      V+V 
Sbjct: 1  MLKRGAITVSMFSNSTVLVGWCRGRRRLRRRRVGTIRLGNKRRGFCLVSRPVIQWGVMVA 60

Query: 61 PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          P RMLK +IM++APN + IEAYY  LPFLRP +FPL
Sbjct: 61 PLRMLKNIIMDMAPNGRFIEAYYLSLPFLRPQIFPL 96

[Close]

BLAST of Csa7G370760 vs. TrEMBL
Match: A0A061DM57_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002687 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.7e-24
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNR--RRGFCLGSR------VV 60
          MLKR ++ ISM  NS  LVGWC  RRR RRRR STIRLGN+  RRGFCLGSR      V+
Sbjct: 1  MLKRGSMTISMFPNSTVLVGWCPGRRRLRRRRGSTIRLGNKAKRRGFCLGSRPVVQWGVM 60

Query: 61 VGPFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          VGP RMLK++I+E+ P  K I+AYY  LPFLRP LFPL
Sbjct: 61 VGPLRMLKKIIVEITPKGKWIQAYYMYLPFLRPQLFPL 98

[Close]

BLAST of Csa7G370760 vs. TrEMBL
Match: A0A067FCH9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042695mg PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-23
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCR--PRRRSRRRRSSTIRLGNRRRGFCLGSR------VV 60
          MLKR +L++SM SNS  LVGWCR   RRRSRRRR  T+RLGN+RR FCLGSR      V+
Sbjct: 1  MLKRSSLSVSMLSNSALLVGWCRGSARRRSRRRRVCTVRLGNKRRRFCLGSRPVVQWGVM 60

Query: 61 VGPFRMLKRLIMELAPNEKLIEAYYSLLP-FLRPTLFPL 91
          VGP RMLK++IME+ PN + IEAYY  LP FLRP + PL
Sbjct: 61 VGPLRMLKKIIMEITPNGRWIEAYYLSLPLFLRPQIIPL 99

[Close]

BLAST of Csa7G370760 vs. TrEMBL
Match: A0A151SSA4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_003940 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.7e-23
Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVV-----GP 60
          MLKR  ++ISM +NS  +VG+CRPRRR RRRR S+IRLGN+RRGFCLGSR VV      P
Sbjct: 1  MLKRGGVSISMLANSTLMVGFCRPRRRLRRRRGSSIRLGNKRRGFCLGSRPVVQWGVMAP 60

Query: 61 FRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
           RMLK++IME+ P    IEAY   LP LRP LFPL
Sbjct: 61 LRMLKKIIMEITPKGNWIEAYCWSLPLLRPQLFPL 95

[Close]

BLAST of Csa7G370760 vs. TAIR10
Match: AT3G07425.1 (AT3G07425.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 6.7e-07
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 1


Query: 21 WCRPRRRSRRRRSSTIRLGNRRRGFCLGS--------RVVVG-PFRMLKRLIMEL---AP 80
          W + RR+ +R     +RLGNRRRGF +G         R+ +G P +M++ +I+ +     
Sbjct: 19 WPQQRRKGKR---VVVRLGNRRRGFLVGPPRMVMQRWRMNMGKPMKMMRSIILGILSNGG 78

Query: 81 NEKLIEAYYSLLPFLRPTLFPL 91
          N K ++AY   LP LRP LFPL
Sbjct: 79 NVKFLDAYLWSLPILRPHLFPL 97

[Close]

BLAST of Csa7G370760 vs. NCBI nr
Match: gi|700189445|gb|KGN44678.1| (hypothetical protein Csa_7G370760 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 6.4e-44
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK 60
          MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK
Sbjct: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSRVVVGPFRMLK 60

Query: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 92
          RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS
Sbjct: 61 RLIMELAPNEKLIEAYYSLLPFLRPTLFPLS 91

[Close]

BLAST of Csa7G370760 vs. NCBI nr
Match: gi|802546600|ref|XP_012085759.1| (PREDICTED: uncharacterized protein LOC105644870 [Jatropha curcas])

HSP 1 Score: 129.0 bits (323), Expect = 4.2e-27
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 1


Query: 1   MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSR------VVVG 60
           M KR  ++ISM SNS  LVGWCRPRRR RR + STIRLGN+RRGFCLGSR      V+V 
Sbjct: 12  MFKRGGVSISMFSNSTMLVGWCRPRRRLRRHKGSTIRLGNKRRGFCLGSRRVVQWGVMVA 71

Query: 61  PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
           PFRMLK++I+++APN +LIEAYY  LPFLRP +FPL
Sbjct: 72  PFRMLKKIILDIAPNGQLIEAYYWSLPFLRPQIFPL 107

[Close]

BLAST of Csa7G370760 vs. NCBI nr
Match: gi|224065443|ref|XP_002301820.1| (hypothetical protein POPTR_0002s25160g [Populus trichocarpa])

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-25
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNRRRGFCLGSR------VVVG 60
          MLKR A+ +SM SNS  LVGWCR RRR RRRR  TIRLGN+RRGFCL SR      V+V 
Sbjct: 1  MLKRGAITVSMFSNSTVLVGWCRGRRRLRRRRVGTIRLGNKRRGFCLVSRPVIQWGVMVA 60

Query: 61 PFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          P RMLK +IM++APN + IEAYY  LPFLRP +FPL
Sbjct: 61 PLRMLKNIIMDMAPNGRFIEAYYLSLPFLRPQIFPL 96

[Close]

BLAST of Csa7G370760 vs. NCBI nr
Match: gi|590713332|ref|XP_007049613.1| (Uncharacterized protein TCM_002687 [Theobroma cacao])

HSP 1 Score: 117.9 bits (294), Expect = 9.6e-24
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCRPRRRSRRRRSSTIRLGNR--RRGFCLGSR------VV 60
          MLKR ++ ISM  NS  LVGWC  RRR RRRR STIRLGN+  RRGFCLGSR      V+
Sbjct: 1  MLKRGSMTISMFPNSTVLVGWCPGRRRLRRRRGSTIRLGNKAKRRGFCLGSRPVVQWGVM 60

Query: 61 VGPFRMLKRLIMELAPNEKLIEAYYSLLPFLRPTLFPL 91
          VGP RMLK++I+E+ P  K I+AYY  LPFLRP LFPL
Sbjct: 61 VGPLRMLKKIIVEITPKGKWIQAYYMYLPFLRPQLFPL 98

[Close]

BLAST of Csa7G370760 vs. NCBI nr
Match: gi|641841992|gb|KDO60901.1| (hypothetical protein CISIN_1g042695mg [Citrus sinensis])

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-23
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 1


Query: 1  MLKREALAISMCSNSGGLVGWCR--PRRRSRRRRSSTIRLGNRRRGFCLGSR------VV 60
          MLKR +L++SM SNS  LVGWCR   RRRSRRRR  T+RLGN+RR FCLGSR      V+
Sbjct: 1  MLKRSSLSVSMLSNSALLVGWCRGSARRRSRRRRVCTVRLGNKRRRFCLGSRPVVQWGVM 60

Query: 61 VGPFRMLKRLIMELAPNEKLIEAYYSLLP-FLRPTLFPL 91
          VGP RMLK++IME+ PN + IEAYY  LP FLRP + PL
Sbjct: 61 VGPLRMLKKIIMEITPNGRWIEAYYLSLPLFLRPQIIPL 99

The following BLAST results are available for this feature:

BLAST of Csa7G370760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5B5_CUCSA	4.5e-44	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G370760 PE=4 SV=1	[more]
B9GQQ6_POPTR	2.1e-25	65.63	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s25160g PE=4 SV=1	[more]
A0A061DM57_THECC	6.7e-24	64.29	Uncharacterized protein OS=Theobroma cacao GN=TCM_002687 PE=4 SV=1	[more]
A0A067FCH9_CITSI	1.5e-23	63.64	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042695mg PE=4 SV=1	[more]
A0A151SSA4_CAJCA	9.7e-23	63.16	Uncharacterized protein OS=Cajanus cajan GN=KK1_003940 PE=4 SV=1	[more]

BLAST of Csa7G370760 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07425.1	6.7e-07	39.02	unknown protein	[more]

BLAST of Csa7G370760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189445\|gb\|KGN44678.1\|	6.4e-44	100.00	hypothetical protein Csa_7G370760 [Cucumis sativus]	[more]
gi\|802546600\|ref\|XP_012085759.1\|	4.2e-27	66.67	PREDICTED: uncharacterized protein LOC105644870 [Jatropha curcas]	[more]
gi\|224065443\|ref\|XP_002301820.1\|	3.0e-25	65.63	hypothetical protein POPTR_0002s25160g [Populus trichocarpa]	[more]
gi\|590713332\|ref\|XP_007049613.1\|	9.6e-24	64.29	Uncharacterized protein TCM_002687 [Theobroma cacao]	[more]
gi\|641841992\|gb\|KDO60901.1\|	2.1e-23	63.64	hypothetical protein CISIN_1g042695mg [Citrus sinensis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G370760.1	Csa7G370760.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G370760	MELO3C021138	Melon (DHL92) v3.5.1	cumeB523
Csa7G370760	MELO3C021138.2	Melon (DHL92) v3.6.1	cumedB502
Csa7G370760	CmaCh17G013080	Cucurbita maxima (Rimu)	cmacuB384

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G370760	Cucumber (Gy14) v2	cgybcuB323
Csa7G370760	Silver-seed gourd	carcuB0013
Csa7G370760	Silver-seed gourd	carcuB0095
Csa7G370760	Watermelon (97103) v2	cuwmbB571
Csa7G370760	Wax gourd	cuwgoB705
Csa7G370760	Cucumber (Gy14) v1	cgycuB545
Csa7G370760	Cucurbita maxima (Rimu)	cmacuB914
Csa7G370760	Cucurbita moschata (Rifu)	cmocuB374
Csa7G370760	Cucurbita moschata (Rifu)	cmocuB900
Csa7G370760	Watermelon (Charleston Gray)	cuwcgB525
Csa7G370760	Watermelon (97103) v1	cuwmB567
Csa7G370760	Cucurbita pepo (Zucchini)	cpecuB157
Csa7G370760	Cucurbita pepo (Zucchini)	cpecuB337
Csa7G370760	Bottle gourd (USVL1VR-Ls)	culsiB503